Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006033 Sechium edule HOM05D002270 ORTHO05D002866 4.9e-202 707.6 362 100.0
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 4.8e-181 637.9 362 91.2
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 2.0e-171 605.9 362 85.9
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 7.7e-171 604.0 362 86.2
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 6.1e-168 594.3 362 85.1
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.7e-149 531.9 357 77.6
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 1.8e-148 529.6 346 77.7
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 3.5e-147 525.4 356 77.2
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 6.5e-146 521.2 357 76.2
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 7.2e-145 517.7 359 76.0
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.8e-143 513.1 349 74.8
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 5.2e-143 511.5 361 74.0
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.5e-142 510.0 360 73.6
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 4.4e-142 508.4 358 72.9
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 5.7e-142 508.1 341 76.0
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.3e-141 506.9 358 72.6
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.8e-141 505.8 355 72.4
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 8.3e-141 504.2 357 73.1
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 3.1e-140 502.3 346 74.9
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.2e-139 500.4 348 73.3
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.6e-139 500.0 357 71.4
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.0e-139 499.6 356 71.9
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 3.8e-138 495.4 354 72.3
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.2e-136 490.3 356 70.8
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 8.0e-136 487.6 341 73.3
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 8.0e-136 487.6 336 73.5
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.0e-135 487.3 355 71.3
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 1.8e-135 486.5 371 70.4
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.8e-135 486.5 353 72.2
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 4.0e-135 485.3 362 69.9
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 8.8e-135 484.2 347 71.8
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 5.7e-134 481.5 340 72.6
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 2.8e-133 479.2 338 72.2
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.9e-133 478.4 354 70.3
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 6.3e-133 478.0 349 69.1
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 8.3e-133 477.6 353 69.7
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.4e-132 476.9 361 69.0
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.0e-131 473.0 356 69.4
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 2.0e-131 473.0 354 68.4
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 2.0e-131 473.0 359 68.2
Eucgr.J02835 Eucalyptus grandis HOM05D002270 ORTHO05D002866 3.5e-131 472.2 301 78.4
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 4.5e-131 471.9 360 67.2
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.0e-130 470.7 362 66.6
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.0e-130 470.7 366 66.9
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.7e-130 469.9 351 70.4
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 2.3e-130 469.5 362 66.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 3.8e-130 468.8 357 68.3
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.6e-130 468.0 362 66.6
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.5e-129 466.8 352 70.2
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 2.1e-128 463.0 358 67.6
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 8.0e-128 461.1 355 67.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.0e-127 460.7 358 68.2
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.8e-127 459.9 358 66.5
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.3e-127 459.5 358 66.5
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.0e-127 459.1 354 66.9
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 3.0e-127 459.1 352 68.8
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 3.0e-127 459.1 357 67.2
CDE12G0817 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.2e-126 457.2 336 68.5
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 1.2e-126 457.2 374 64.4
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.5e-126 456.8 349 69.1
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 7.5e-126 454.5 374 65.2
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.7e-125 453.4 358 66.8
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 6.4e-125 451.4 333 69.1
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.1e-124 450.7 351 67.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 3.2e-124 449.1 356 66.9
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.2e-123 447.2 357 63.9
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 2.7e-123 446.0 333 69.7
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 2.7e-123 446.0 357 67.5
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.6e-123 445.3 348 66.4
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 4.6e-123 445.3 340 67.4
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 2.3e-122 443.0 334 68.6
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 3.0e-122 442.6 365 65.2
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 2.5e-121 439.5 397 60.5
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 4.3e-121 438.7 350 63.1
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 7.3e-121 438.0 357 64.4
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.2e-120 437.2 350 65.4
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.1e-120 436.4 350 65.7
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.0e-119 434.1 351 65.0
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.2e-118 430.6 326 68.7
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.4e-118 428.7 269 81.0
TAR636G2258 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.2e-117 426.4 260 82.3
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 2.4e-116 422.9 363 62.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.3e-114 417.2 352 60.5
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.3e-114 417.2 352 61.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 2.3e-114 416.4 364 60.2
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 3.9e-114 415.6 359 60.2
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.1e-113 414.1 360 60.8
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.5e-113 413.7 352 59.9
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.5e-113 412.9 365 59.7
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.2e-112 410.6 359 61.3
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.1e-111 407.5 353 60.6
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 4.0e-111 405.6 359 59.1
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 4.0e-111 405.6 385 57.9
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.5e-110 403.7 350 60.0
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 2.0e-110 403.3 350 59.7
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.8e-110 401.7 350 59.4
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 9.9e-110 401.0 350 59.7
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 9.9e-110 401.0 350 59.4
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.7e-109 400.2 354 59.0
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 8.3e-109 397.9 348 59.5
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.4e-108 397.1 352 60.5
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 7.8e-107 391.3 286 65.4
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 5.6e-105 385.2 312 60.6
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 9.5e-105 384.4 280 66.8
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 6.2e-104 381.7 291 62.9
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 3.8e-101 372.5 284 63.0
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 5.2e-95 352.1 306 62.1
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.7e-93 347.1 271 68.3
VMungo1080G1592 Vigna mungo HOM05D002270 ORTHO05D002866 4.9e-77 292.4 234 67.5
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 5.5e-76 288.9 205 67.8
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.8e-74 283.9 300 50.7
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 1.3e-72 277.7 288 50.3
MCO14G006 Micromonas commoda HOM05D002270 ORTHO05D002866 6.2e-72 275.4 286 47.6
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 1.0e-66 258.1 234 59.0
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 4.3e-65 252.7 280 45.0
Aqoxy6G02932 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 5.5e-60 235.7 165 72.1
TPR.G51 Trifolium pratense HOM05D002270 ORTHO05D002866 1.3e-56 224.6 149 77.9
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 3.8e-53 213.0 167 64.7
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.2e-32 144.1 105 70.5
SMO141G0258 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 2.8e-32 143.7 92 70.7
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 1.7e-29 134.4 118 65.3
TPR.G582 Trifolium pratense HOM05D002270 ORTHO05D002866 9.4e-28 128.6 118 56.8
Medtr8g019250 Medicago truncatula HOM05D002270 ORTHO05D002866 1.0e-26 125.2 81 79.0
TPR.G9785 Trifolium pratense HOM05D002270 ORTHO05D002866 3.4e-25 120.2 79 72.2
SMO141G0084 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 2.7e-22 110.5 81 63.0
SEGI_22737 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.0e-18 98.6 76 61.8
QL05p008973 Quercus lobata HOM05D002270 ORTHO05D001155 1.5e-17 94.7 66 75.8
BolC8t51649H Brassica oleracea HOM05D002270 ORTHO05D002866 9.5e-12 75.5 78 51.3
QL05p008929 Quercus lobata HOM05D002270 ORTHO05D338108 2.2e-08 64.3 141 35.5
SMO141G0121 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 1.1e-07 62.0 44 61.4
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 1.4e-07 61.6 36 69.4
Cre02.g095550 Chlamydomonas reinhardtii HOM05D053512 ORTHO05D012763 2.0e-06 57.8 177 29.4


User provided reference genes

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