Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.5e-72 276.2 147 100.0
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 5.5e-59 231.1 147 87.1
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 7.2e-59 230.7 147 78.2
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 5.9e-53 211.1 120 81.7
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.2e-52 209.1 111 82.9
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 3.8e-52 208.4 123 75.6
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 5.0e-52 208.0 111 84.7
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 1.1e-51 206.8 175 64.0
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 1.4e-51 206.5 120 80.8
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 7.2e-51 204.1 123 76.4
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 7.2e-51 204.1 123 76.4
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 9.4e-51 203.8 111 81.1
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 9.4e-51 203.8 123 75.6
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 6.1e-50 201.1 122 73.8
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 7.9e-50 200.7 111 79.3
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.4e-49 199.9 113 78.8
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.8e-49 199.5 122 74.6
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.8e-49 199.5 111 77.5
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 2.3e-49 199.1 147 74.8
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 2.3e-49 199.1 108 82.4
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 3.9e-49 198.4 118 75.4
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 3.9e-49 198.4 121 76.0
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.9e-49 198.4 121 76.0
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.9e-49 198.4 121 76.0
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.9e-49 198.4 107 83.2
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 3.9e-49 198.4 117 78.6
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 5.1e-49 198.0 117 78.6
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 8.8e-49 197.2 109 80.7
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.1e-48 196.8 107 81.3
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.1e-48 196.8 107 81.3
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.1e-48 196.8 116 77.6
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.5e-48 196.4 122 74.6
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 2.6e-48 195.7 111 78.4
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 3.3e-48 195.3 117 76.9
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 4.4e-48 194.9 114 74.6
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 4.4e-48 194.9 110 78.2
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.7e-48 194.5 108 79.6
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.3e-47 193.4 115 73.9
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.3e-47 193.4 109 76.1
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.3e-47 193.4 111 80.2
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.7e-47 193.0 147 63.3
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 1.7e-47 193.0 118 73.7
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.2e-47 192.6 108 77.8
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 2.2e-47 192.6 119 75.6
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 2.8e-47 192.2 115 73.0
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 2.8e-47 192.2 146 65.1
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 4.8e-47 191.4 120 73.3
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 4.8e-47 191.4 121 71.1
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 1.1e-46 190.3 111 74.8
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 1.1e-46 190.3 119 73.1
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 1.4e-46 189.9 122 70.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.4e-46 189.9 120 70.0
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.8e-46 189.5 108 77.8
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.8e-46 189.5 108 80.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.8e-46 189.5 108 77.8
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 1.8e-46 189.5 103 83.5
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 4.1e-46 188.3 119 73.9
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 4.1e-46 188.3 119 73.9
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 4.1e-46 188.3 119 73.9
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 7.0e-46 187.6 146 65.1
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 9.1e-46 187.2 119 72.3
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 9.1e-46 187.2 108 77.8
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 9.1e-46 187.2 115 70.4
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 9.1e-46 187.2 108 76.9
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.5e-45 186.4 108 77.8
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 1.5e-45 186.4 113 75.2
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 2.0e-45 186.0 119 69.7
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 2.6e-45 185.7 141 68.1
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 3.4e-45 185.3 146 67.1
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 7.7e-45 184.1 110 74.5
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.8e-44 181.8 108 72.2
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 3.8e-44 181.8 115 70.4
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 5.0e-44 181.4 108 73.1
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 6.5e-44 181.0 114 69.3
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.4e-43 179.9 111 73.0
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 3.2e-43 178.7 152 57.2
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 4.2e-43 178.3 107 72.9
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 5.5e-43 177.9 116 69.8
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 7.2e-43 177.6 110 72.7
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 7.2e-43 177.6 111 71.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 7.2e-43 177.6 116 68.1
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.2e-42 176.8 110 67.3
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.2e-42 176.8 116 69.0
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 3.6e-42 175.3 118 66.1
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 4.7e-42 174.9 111 71.2
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 6.1e-42 174.5 113 66.4
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.8e-41 172.9 111 69.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 2.3e-41 172.6 116 67.2
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 2.3e-41 172.6 116 66.4
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 5.2e-41 171.4 112 70.5
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 1.1e-40 170.2 111 66.7
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 2.0e-40 169.5 111 69.4
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.4e-40 168.3 107 72.9
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 5.7e-40 167.9 108 68.5
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 3.7e-39 165.2 111 66.7
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 8.2e-39 164.1 168 51.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 1.4e-38 163.3 118 65.3
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 7.0e-38 161.0 95 76.8
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 7.0e-38 161.0 95 77.9
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 2.0e-37 159.5 125 62.4
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 5.0e-36 154.8 118 58.5
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 8.5e-36 154.1 115 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.4e-33 146.7 113 56.6
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 1.8e-30 136.3 102 60.8
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 2.0e-29 132.9 116 49.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.2e-24 117.1 72 76.4
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.6e-24 115.9 106 50.0
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.3e-23 113.6 88 64.8
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 1.6e-21 106.7 96 53.1
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 2.3e-17 92.8 57 68.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.6e-16 89.4 55 67.3
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 2.6e-16 89.4 98 44.9
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 8.3e-15 84.3 53 69.8
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 1.1e-14 84.0 50 74.0
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.1e-14 84.0 51 74.5
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.1e-14 84.0 51 68.6
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.4e-14 83.6 51 70.6
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 2.0e-13 79.7 45 75.6
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 5.9e-13 78.2 49 69.4
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 7.8e-13 77.8 44 75.0
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 5.0e-12 75.1 48 68.8
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 9.8e-08 60.8 77 36.4
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 1.3e-07 60.5 94 39.4


User provided reference genes

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