Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 8.7e-234 813.9 646 100.0
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.5e-169 600.5 379 77.8
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.7e-168 597.0 359 83.0
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 4.1e-167 592.4 372 77.4
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.5e-116 424.5 364 58.5
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.0e-112 411.8 347 60.5
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 4.2e-111 406.4 339 56.3
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 7.1e-111 405.6 339 58.4
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 9.3e-111 405.2 356 57.3
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.1e-110 404.1 346 54.6
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.7e-110 403.7 346 54.9
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.5e-110 403.3 339 59.3
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 6.0e-110 402.5 346 54.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 6.0e-110 402.5 339 60.2
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.8e-109 401.0 346 58.4
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.0e-109 400.2 363 56.2
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.1e-108 398.3 362 55.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.5e-108 397.1 346 53.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.6e-107 394.4 372 53.2
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 4.8e-107 392.9 365 54.0
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 8.2e-107 392.1 363 55.1
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.1e-106 391.7 350 55.7
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-106 391.7 356 56.7
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.4e-106 390.6 354 58.5
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 4.1e-106 389.8 361 52.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 5.3e-106 389.4 365 52.3
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.2e-105 388.3 358 54.2
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.0e-105 387.5 359 54.3
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 5.9e-105 386.0 352 54.0
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.3e-104 384.8 303 60.7
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.7e-104 384.4 307 58.6
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.9e-104 383.6 365 52.1
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.1e-103 381.7 331 57.1
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 2.5e-103 380.6 363 53.7
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 9.3e-103 378.6 327 57.5
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.2e-102 378.3 349 53.9
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.8e-101 374.4 362 53.0
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.7e-101 372.1 371 53.1
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.5e-100 371.3 342 52.3
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.5e-100 371.3 365 50.4
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.5e-100 371.3 365 51.2
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 3.3e-100 370.2 309 57.3
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 3.3e-100 370.2 364 52.5
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 3.3e-100 370.2 328 55.5
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.7e-100 369.4 358 58.1
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 9.7e-100 368.6 358 53.6
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.2e-99 367.5 365 50.4
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.8e-99 367.1 360 50.3
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 4.8e-99 366.3 365 50.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 6.3e-99 365.9 349 52.4
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.4e-98 364.8 369 48.5
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 1.8e-98 364.4 365 52.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.8e-98 364.4 367 52.9
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.1e-98 363.6 334 52.4
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 5.3e-98 362.8 327 54.4
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 9.0e-98 362.1 360 51.9
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 9.0e-98 362.1 373 49.1
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 2.6e-97 360.5 359 49.9
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.9e-97 359.4 353 49.9
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.9e-97 359.4 371 49.9
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.7e-97 359.0 371 52.8
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.0e-96 358.6 362 48.1
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 3.8e-96 356.7 362 48.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.8e-96 356.7 312 59.3
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 5.0e-96 356.3 337 52.5
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 8.5e-96 355.5 346 55.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.1e-95 355.1 365 49.0
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.4e-95 354.8 334 51.5
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.9e-95 354.4 367 49.3
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 5.5e-95 352.8 365 48.2
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.2e-94 351.7 367 48.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.1e-94 350.9 355 55.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.1e-94 350.9 338 51.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.6e-94 350.1 367 48.8
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 4.6e-94 349.7 346 55.2
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 7.9e-94 349.0 359 49.9
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.0e-93 348.6 359 49.9
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.8e-93 347.8 356 48.0
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 3.0e-93 347.1 372 52.2
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 6.7e-93 345.9 334 53.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 8.8e-93 345.5 350 48.6
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.3e-92 343.6 309 54.7
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 7.4e-92 342.4 369 49.9
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.3e-91 341.7 374 50.5
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.3e-91 341.7 363 48.2
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.7e-91 341.3 345 51.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 2.2e-91 340.9 374 49.7
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 2.4e-90 337.4 368 49.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 3.1e-90 337.0 319 53.0
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.2e-89 335.1 357 51.5
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.2e-89 335.1 363 49.0
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.4e-89 333.6 363 47.4
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.5e-89 333.2 352 51.7
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.5e-89 333.2 356 50.0
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.0e-88 332.0 375 50.4
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.0e-88 332.0 352 51.4
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.3e-88 331.6 368 49.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.2e-88 330.9 345 49.3
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.9e-88 330.5 352 51.4
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.9e-88 330.5 368 48.9
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.8e-88 330.1 350 49.7
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.8e-88 330.1 243 64.6
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 6.5e-88 329.3 362 49.2
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.1e-87 328.6 339 54.3
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.5e-87 327.4 339 51.9
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 5.5e-87 326.2 368 46.7
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 1.6e-86 324.7 362 48.9
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 7.9e-86 322.4 362 46.7
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.8e-85 321.2 369 45.8
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.1e-84 318.5 369 45.5
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-84 318.2 359 48.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 2.6e-84 317.4 353 50.4
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 9.7e-84 315.5 362 45.9
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 1.7e-83 314.7 358 50.0
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 8.2e-83 312.4 357 49.9
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 1.4e-82 311.6 355 50.1
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 7.0e-82 309.3 418 40.7
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.0e-82 309.3 366 47.3
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.2e-81 308.5 286 51.7
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.6e-81 308.1 346 49.1
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 2.6e-81 307.4 259 56.0
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.5e-81 306.6 355 50.1
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 2.2e-80 304.3 356 50.0
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.9e-80 303.9 348 47.1
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 8.5e-80 302.4 373 48.5
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 5.5e-79 299.7 369 47.4
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 5.5e-79 299.7 217 65.0
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 9.4e-79 298.9 373 48.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.8e-77 294.7 297 48.1
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 8.8e-77 292.4 344 48.0
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.5e-76 291.6 353 47.9
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 4.4e-76 290.0 353 47.9
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 9.7e-76 288.9 348 47.7
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.3e-75 288.5 355 47.3
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.3e-75 288.5 355 47.3
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 1.8e-74 284.6 295 47.5
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.9e-72 277.3 281 51.2
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.7e-70 270.8 329 48.3
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.9e-63 248.1 321 38.3
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.2e-63 246.1 329 43.8
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.6e-62 245.0 338 42.0
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.6e-62 245.0 316 43.0
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 2.7e-62 244.2 335 39.4
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.6e-62 243.8 329 43.8
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 6.1e-62 243.0 281 50.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.4e-61 241.9 319 38.9
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.3e-56 224.6 192 53.1
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.9e-55 221.5 189 54.0
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 8.9e-53 212.6 345 35.1
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.6e-52 211.1 290 38.3
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.3e-47 193.7 215 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 5.6e-47 193.4 269 37.9
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.4e-45 188.7 333 32.1
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.8e-45 188.3 313 35.1
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 8.9e-45 186.0 269 36.1
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.7e-43 181.8 147 57.8
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-41 175.6 267 36.7
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-41 175.6 267 36.7
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.7e-40 171.8 135 64.4
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 7.3e-39 166.4 293 33.1
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.4e-37 162.2 192 40.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.9e-37 159.5 118 66.9
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.4e-36 157.1 135 60.0
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.4e-28 131.0 112 58.9
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.8e-28 130.2 133 48.9
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.9e-24 117.5 165 47.3
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.1e-22 111.7 216 33.8
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 4.6e-17 94.0 215 28.8
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 6.0e-17 93.6 154 36.4
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.3e-16 91.7 64 65.6
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.7e-16 89.7 79 51.9
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 8.1e-14 83.2 74 55.4
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.6e-12 78.2 84 44.0
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.4e-10 71.6 114 36.8
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 8.1e-06 56.6 54 50.0


User provided reference genes

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