Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.3e-239 831.2 405 100.0
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.3e-162 575.5 434 70.3
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.7e-161 571.6 434 69.1
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.3e-158 563.5 434 68.2
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 5.2e-152 541.6 434 65.9
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 6.6e-139 498.0 433 61.0
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 2.5e-138 496.1 434 60.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.6e-137 493.4 425 60.7
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 3.1e-136 489.2 432 59.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.0e-135 486.5 435 60.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.7e-134 483.4 435 59.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.4e-133 480.3 425 60.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.2e-133 479.2 425 59.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 4.2e-133 478.8 435 59.5
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 4.2e-133 478.8 434 60.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.2e-132 477.2 445 58.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.7e-132 476.1 436 57.6
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 3.9e-131 472.2 436 57.3
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 5.1e-131 471.9 465 56.1
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.1e-131 471.9 439 56.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.5e-130 470.3 431 58.5
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.5e-130 469.5 436 58.5
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.5e-130 469.5 432 58.3
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 4.3e-130 468.8 431 58.9
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 9.6e-130 467.6 434 58.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 3.6e-129 465.7 435 58.2
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 2.4e-128 463.0 434 57.4
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.0e-128 462.2 425 57.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 5.3e-128 461.8 430 57.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 6.9e-128 461.5 434 58.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 9.0e-128 461.1 432 58.3
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.2e-127 460.7 426 58.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 2.0e-127 459.9 432 56.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.0e-127 459.9 430 57.2
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.6e-127 459.5 432 57.2
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 3.4e-127 459.1 433 55.7
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 4.5e-127 458.8 428 57.2
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.3e-126 457.2 434 57.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.3e-126 457.2 433 55.4
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.7e-126 456.8 436 56.7
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.9e-126 456.1 433 55.4
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 8.4e-126 454.5 446 56.3
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.4e-125 453.8 444 53.8
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 3.2e-125 452.6 421 58.2
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.2e-125 452.6 436 56.4
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 5.4e-125 451.8 444 53.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.7e-124 449.5 440 55.5
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 3.5e-124 449.1 434 56.2
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 4.6e-124 448.7 428 56.3
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 8.7e-123 444.5 436 58.0
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.3e-122 442.2 435 55.6
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 4.8e-121 438.7 434 55.1
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 4.8e-121 438.7 434 55.1
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.1e-121 438.0 434 54.8
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 1.4e-120 437.2 432 54.9
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.4e-120 436.4 435 55.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 6.9e-120 434.9 430 55.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 9.0e-120 434.5 425 54.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.0e-120 434.5 435 54.9
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 9.0e-120 434.5 438 54.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.6e-119 433.0 427 56.9
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 4.5e-119 432.2 427 56.2
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.5e-119 432.2 438 53.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.8e-119 431.8 426 56.6
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 5.8e-119 431.8 429 56.6
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 5.8e-119 431.8 338 64.8
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.8e-119 431.8 428 54.4
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 7.6e-119 431.4 430 57.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 9.9e-119 431.0 426 56.6
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 9.9e-119 431.0 429 52.7
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.3e-118 430.6 427 54.3
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.7e-118 430.3 428 54.4
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.7e-118 430.3 427 54.3
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.2e-118 429.9 426 56.6
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.2e-118 429.9 453 53.4
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.8e-118 429.1 426 56.6
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.8e-118 429.1 427 54.1
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 6.4e-118 428.3 431 54.8
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.1e-117 427.6 432 52.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.1e-117 427.6 426 52.3
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.4e-117 427.2 430 56.3
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.9e-117 426.8 426 56.3
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 3.2e-117 426.0 425 54.4
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 3.2e-117 426.0 440 54.8
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 3.2e-117 426.0 473 50.1
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 5.5e-117 425.2 434 53.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.6e-116 422.2 453 52.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.8e-115 420.2 425 53.2
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.8e-115 420.2 425 53.2
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.3e-115 419.9 422 51.9
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.1e-114 417.5 424 53.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.5e-114 417.2 335 64.8
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.6e-111 406.4 439 51.3
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 7.6e-111 404.8 425 52.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.7e-110 403.7 347 58.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.7e-110 403.7 425 50.6
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.2e-110 403.3 425 51.3
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.1e-109 401.0 430 50.7
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.2e-109 399.4 420 51.0
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.1e-108 396.7 420 52.4
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 7.9e-108 394.8 423 50.1
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.9e-107 392.5 439 46.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 8.7e-107 391.3 423 51.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.3e-102 377.5 430 48.6
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.8e-99 367.1 428 46.3
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 3.7e-97 359.4 436 45.4
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.0e-95 353.6 406 52.0
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.8e-94 349.4 423 47.3
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 3.2e-93 346.3 354 53.4
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 5.3e-88 328.9 432 41.7
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 5.0e-86 322.4 434 42.2
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 9.7e-82 308.1 354 43.2
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.2e-78 297.0 300 55.3
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.6e-68 264.2 263 54.4
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.7e-68 263.5 424 41.7
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 5.7e-66 255.8 197 65.0
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.8e-60 236.9 247 52.6
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.4e-56 223.8 187 62.0
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 5.2e-51 206.1 434 32.7
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.2e-47 194.9 255 44.7
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.5e-42 177.9 141 65.2
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 7.5e-34 149.1 241 36.9


User provided reference genes

Program Settings