Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 7.6e-71 270.4 137 100.0
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.2e-63 246.5 137 91.2
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 1.2e-63 246.5 137 89.8
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 3.5e-60 235.0 135 85.9
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 6.0e-60 234.2 136 83.8
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 83.2
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 83.2
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 83.2
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 83.2
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.3e-59 233.0 137 82.5
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.3e-59 233.0 137 83.9
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.3e-59 233.0 137 83.2
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.3e-59 233.0 138 83.3
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-59 232.6 137 83.9
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 2.3e-59 232.3 129 88.4
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 3.0e-59 231.9 137 83.9
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 3.0e-59 231.9 137 83.9
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 3.0e-59 231.9 137 83.9
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 83.2
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 83.2
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 6.7e-59 230.7 133 84.2
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 8.7e-59 230.3 137 82.5
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 8.7e-59 230.3 137 82.5
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 8.7e-59 230.3 137 82.5
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 8.7e-59 230.3 137 83.2
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 1.1e-58 229.9 137 82.5
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 1.1e-58 229.9 137 82.5
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.1e-58 229.9 137 82.5
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.1e-58 229.9 136 81.6
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.1e-58 229.9 136 81.6
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.1e-58 229.9 136 81.6
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 1.5e-58 229.6 137 81.8
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.9e-58 229.2 137 81.8
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.5e-58 228.8 137 81.8
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.5e-58 228.8 137 81.8
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 3.3e-58 228.4 137 82.5
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.3e-58 228.4 137 80.3
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 3.3e-58 228.4 137 80.3
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.3e-58 228.4 137 81.8
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 4.3e-58 228.0 133 82.7
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 4.3e-58 228.0 137 81.0
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 5.6e-58 227.6 137 81.8
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.6e-58 227.6 137 80.3
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.6e-58 227.6 137 80.3
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 80.3
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 7.4e-58 227.3 144 81.9
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 84.7
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 9.6e-58 226.9 132 83.3
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 9.6e-58 226.9 135 81.5
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 1.3e-57 226.5 137 80.3
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 1.3e-57 226.5 137 81.8
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 1.6e-57 226.1 137 83.2
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.6e-57 226.1 137 81.0
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 2.1e-57 225.7 135 82.2
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.1e-57 225.7 137 81.0
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.1e-57 225.7 137 80.3
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 4.8e-57 224.6 136 80.1
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 6.2e-57 224.2 139 82.0
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 8.2e-57 223.8 137 79.6
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 8.2e-57 223.8 123 89.4
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.1e-56 223.4 134 79.9
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.8e-56 222.6 123 88.6
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 2.4e-56 222.2 145 80.0
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 2.4e-56 222.2 137 81.0
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 3.1e-56 221.9 144 79.2
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.3e-56 221.1 137 80.3
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.2e-55 219.9 129 82.9
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 2.6e-55 218.8 135 79.3
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 2.6e-55 218.8 137 79.6
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 4.5e-55 218.0 140 76.4
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 5.8e-55 217.6 138 78.3
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 7.6e-55 217.2 164 71.3
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 1.0e-54 216.9 137 75.2
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.3e-54 216.5 137 74.5
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.7e-54 216.1 137 78.8
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 135 79.3
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 3.8e-54 214.9 135 77.0
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 4.9e-54 214.5 135 78.5
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 8.4e-54 213.8 140 73.6
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 1.1e-53 213.4 137 72.3
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 1.9e-53 212.6 140 73.6
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.9e-53 212.6 158 72.8
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.9e-53 212.6 135 77.0
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 2.5e-53 212.2 137 75.9
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 2.5e-53 212.2 125 84.0
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 2.5e-53 212.2 125 84.0
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 2.5e-53 212.2 137 76.6
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 4.2e-53 211.5 138 76.1
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 4.2e-53 211.5 144 73.6
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 1.2e-52 209.9 129 79.1
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 1.6e-52 209.5 128 79.7
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 3.5e-52 208.4 127 78.0
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 3.5e-52 208.4 142 73.2
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 6.0e-52 207.6 123 81.3
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 1.0e-51 206.8 144 72.9
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.5e-50 202.2 121 86.8
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 4.3e-50 201.4 126 80.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 4.3e-50 201.4 131 74.0
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.4e-48 196.4 131 70.2
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.8e-48 196.1 127 70.9
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 6.9e-48 194.1 131 69.5
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 6.9e-48 194.1 137 72.3
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 2.6e-47 192.2 137 72.3
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 2.6e-47 192.2 124 71.8
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 2.2e-46 189.1 127 75.6
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 5.0e-46 188.0 110 83.6
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.2e-45 185.3 110 83.6
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 5.5e-45 184.5 112 83.0
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 9.4e-45 183.7 114 81.6
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 2.7e-44 182.2 106 85.8
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.6e-44 181.8 110 83.6
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 3.6e-44 181.8 110 82.7
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.0e-43 180.3 133 71.4
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.8e-43 179.5 110 81.8
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 1.4e-40 169.9 113 77.0
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 3.1e-40 168.7 145 62.1
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 2.6e-39 165.6 140 66.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.0e-38 163.7 106 73.6
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 2.1e-36 156.0 118 66.1
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 2.1e-36 156.0 135 61.5
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 7.9e-36 154.1 98 77.6
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 1.8e-35 152.9 115 62.6
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.2e-33 146.0 85 84.7
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 4.8e-33 144.8 84 85.7
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 2.4e-32 142.5 84 86.9
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 7.0e-32 141.0 182 46.2
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 1.7e-30 136.3 84 82.1
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 3.2e-29 132.1 86 77.9
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 2.7e-28 129.0 84 76.2
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.5e-26 123.2 104 54.8
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.5e-26 123.2 132 54.5
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.5e-26 123.2 120 55.8
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 2.0e-26 122.9 98 64.3
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.2e-25 119.4 73 75.3
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 1.6e-23 113.2 97 59.8
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 7.7e-23 110.9 114 47.4
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 3.8e-22 108.6 64 79.7
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 4.2e-21 105.1 65 75.4
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 6.8e-19 97.8 125 38.4
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.2e-18 97.1 60 76.7
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 1.7e-17 93.2 53 81.1
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.4e-16 90.1 50 88.0
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 1.4e-16 90.1 60 76.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.8e-16 89.7 62 72.6
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.2e-15 87.0 61 73.8
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.6e-15 86.7 52 75.0
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.7e-15 85.9 77 57.1
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 2.9e-14 82.4 107 41.1
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 3.2e-13 79.0 43 83.7
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 1.3e-09 67.0 126 34.1
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.8e-09 65.9 88 46.6
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 5.9e-07 58.2 41 68.3
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.7e-06 56.6 41 65.9


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