Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 0.0e+00 1753.8 1547 100.0
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 0.0e+00 1260.0 1668 64.1
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 4.0e-309 1065.4 1678 57.2
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 5.4e-306 1055.0 1579 65.3
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 3.2e-202 710.3 1477 60.0
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 3.4e-159 567.4 1564 39.4
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 1.6e-156 558.5 1541 43.3
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 4.2e-149 533.9 1553 44.6
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.6e-145 521.9 1561 38.5
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 2.8e-145 521.2 1085 40.9
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 8.1e-145 519.6 1564 40.9
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.6e-140 505.4 1572 41.8
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 9.0e-128 463.0 1563 39.2
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 2.6e-127 461.5 1548 42.0
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 1.1e-125 456.1 1565 39.9
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 1.9e-125 455.3 1565 39.8
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.1e-124 451.8 1556 42.2
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 6.7e-123 446.8 1495 38.9
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 2.5e-122 444.9 1576 38.5
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 7.4e-122 443.4 1553 38.2
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.6e-121 442.2 1615 39.5
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 2.8e-121 441.4 1127 50.1
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 6.3e-121 440.3 1574 42.5
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 1.0e-118 433.0 1648 40.3
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 2.2e-118 431.8 1476 38.8
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 3.2e-117 427.9 1556 42.4
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 9.4e-117 426.4 1573 37.9
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 3.3e-114 417.9 1143 44.3
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 8.2e-113 413.3 1534 39.0
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 1.1e-112 412.9 1647 33.9
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 1.0e-110 406.4 1674 36.0
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 5.0e-110 404.1 1563 37.3
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 1.9e-109 402.1 1551 37.8
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 9.4e-109 399.8 1534 41.6
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.0e-107 396.4 1562 37.7
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 5.1e-107 394.0 1645 39.0
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 7.4e-106 390.2 1534 36.0
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 2.8e-105 388.3 1128 46.3
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 2.8e-105 388.3 1563 41.7
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.7e-105 387.9 1563 40.0
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 2.5e-101 375.2 1080 38.3
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 5.5e-101 374.0 1555 35.6
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.0e-99 369.8 1563 38.1
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 1.4e-99 369.4 1641 38.1
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 5.2e-99 367.5 1140 43.2
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 1.7e-97 362.5 1556 37.5
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 6.3e-97 360.5 1538 37.1
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 8.2e-97 360.1 1176 42.4
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 3.5e-95 354.8 1563 39.1
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 7.7e-95 353.6 1713 33.3
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 6.5e-94 350.5 1569 39.5
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.5e-94 350.5 1552 41.0
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 8.0e-92 343.6 1742 35.0
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 3.0e-91 341.7 623 54.1
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.0e-91 341.3 1563 37.0
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 8.8e-91 340.1 1135 41.0
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 5.7e-90 337.4 1541 38.5
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 8.3e-89 333.6 1547 37.0
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.1e-85 323.2 1552 38.8
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.2e-85 321.2 1552 39.0
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 1.2e-84 319.7 1534 37.7
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.6e-84 319.3 508 53.3
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.0e-83 316.6 1543 34.3
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 4.0e-83 314.7 1548 34.7
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 8.8e-83 313.5 1566 40.8
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.5e-82 312.8 1562 39.1
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 7.5e-82 310.5 1532 39.6
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 8.3e-81 307.0 1244 28.0
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 9.1e-80 303.5 1562 39.0
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.3e-78 299.7 1563 36.7
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.3e-78 299.7 1563 36.7
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.5e-77 296.2 1563 37.8
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 9.5e-77 293.5 1565 38.7
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 9.5e-77 293.5 1577 34.2
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 1.2e-76 293.1 341 54.5
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.2e-76 293.1 1549 33.8
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 3.4e-74 285.0 961 38.3
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 2.4e-72 278.9 1536 37.5
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 2.0e-71 275.8 1537 41.0
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 1.7e-70 272.7 1572 35.0
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 1.7e-70 272.7 811 31.3
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 1.3e-65 256.5 1742 31.9
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 6.6e-62 244.2 1586 38.1
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 1.1e-59 236.9 967 27.7
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 1.3e-54 219.9 1530 33.5
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 8.1e-52 210.7 1322 36.1
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 2.0e-50 206.1 818 47.3
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 3.4e-50 205.3 469 40.5
Actinidia12513 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.9e-48 199.5 370 41.6
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 2.4e-48 199.1 1551 34.4
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 4.1e-48 198.4 1527 33.5
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 6.6e-46 191.0 308 43.2
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 1.9e-40 172.9 271 49.8
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 4.6e-39 168.3 1048 38.6
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 1.5e-37 163.3 273 40.3
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 2.1e-36 159.5 365 37.5
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 2.2e-33 149.4 243 42.0
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 3.5e-31 142.1 488 35.7
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.6e-31 141.7 271 43.5
HPP92_009459 Vanilla planifolia HOM05D003806 ORTHO05D004346 4.6e-31 141.7 1536 27.0
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 5.1e-30 138.3 329 35.9
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 1.6e-28 133.3 1109 34.6
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 3.6e-28 132.1 238 42.0
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 1.1e-27 130.6 244 43.9
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 1.1e-27 130.6 243 50.6
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 3.1e-27 129.0 309 36.2
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 5.3e-27 128.3 244 43.0
SEGI_00522 Sequoiadendron giganteum HOM05D003806 ORTHO05D004346 3.8e-25 122.1 415 27.5
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 1.4e-24 120.2 420 30.0
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 1.9e-24 119.8 243 48.6
BcaC01g05916 Brassica carinata HOM05D003806 ORTHO05D004346 5.4e-24 118.2 254 47.6
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 7.1e-24 117.9 162 45.7
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 9.3e-24 117.5 332 36.1
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 9.3e-24 117.5 267 43.8
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 1.2e-23 117.1 235 43.0
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 2.1e-23 116.3 344 30.2
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 3.0e-22 112.5 793 24.3
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 2.1e-20 106.3 190 40.0
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.8e-20 105.9 1171 27.8
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 2.8e-20 105.9 271 42.8
BolC5t29142H Brassica oleracea HOM05D003806 ORTHO05D004346 6.2e-20 104.8 270 35.2
Actinidia31597 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.4e-19 103.6 157 52.9
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.8e-19 103.2 415 29.6
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 4.0e-19 102.1 228 65.4
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 6.9e-19 101.3 222 37.4
Aa31LG5G4290 Aethionema arabicum HOM05D003806 ORTHO05D004346 9.0e-19 100.9 814 27.1
A03p18080 Brassica napus HOM05D003806 ORTHO05D004346 9.0e-19 100.9 254 44.9
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 1.2e-18 100.5 270 35.9
C03p21110 Brassica napus HOM05D003806 ORTHO05D004346 7.6e-18 97.8 254 45.3
BolC3t14493H Brassica oleracea HOM05D003806 ORTHO05D004346 7.6e-18 97.8 254 45.3
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 2.2e-17 96.3 269 41.3
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 3.8e-17 95.5 137 41.6
Aa31LG1G19290 Aethionema arabicum HOM05D003806 ORTHO05D004346 8.4e-17 94.4 105 47.6
Aa31LG1G19380 Aethionema arabicum HOM05D003806 ORTHO05D004346 8.4e-17 94.4 105 47.6
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.4e-16 93.6 172 44.2
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 1.4e-16 93.6 226 37.2
AUR62044057 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.2e-16 92.0 228 34.2
AUR62044188 Chenopodium quinoa HOM05D003806 ORTHO05D004346 9.3e-16 90.9 228 33.8
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 4.6e-15 88.6 509 26.3
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 1.3e-14 87.0 1564 36.9
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 5.1e-14 85.1 269 34.9
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 5.1e-14 85.1 146 43.2
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 6.7e-14 84.7 376 38.6
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 7.4e-13 81.3 121 48.8
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.1e-12 79.7 270 29.6
HPP92_027643 Vanilla planifolia HOM05D003806 ORTHO05D004346 2.1e-12 79.7 184 34.8
A10p04030 Brassica napus HOM05D003806 ORTHO05D004346 1.5e-10 73.6 270 30.0
ATR0763G279 Amborella trichopoda HOM05D003806 ORTHO05D004346 2.6e-10 72.8 340 27.9
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.7e-09 70.1 136 39.0
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 5.0e-09 68.6 137 38.0
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.2e-08 65.9 190 29.5
Os04g0614650 Oryza sativa ssp. japonica HOM05D003806 ORTHO05D004346 3.2e-08 65.9 282 29.8
AUR62043600 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.1e-07 63.2 141 34.8
Zm00001eb430870 Zea mays HOM05D003806 ORTHO05D004346 2.7e-07 62.8 310 28.7
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 6.1e-07 61.6 91 47.3
CARHR004810 Cardamine hirsuta HOM05D003806 ORTHO05D004346 1.0e-06 60.8 356 28.1
BraA03t11067Z Brassica rapa HOM05D003806 ORTHO05D004346 2.3e-06 59.7 254 38.6
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 6.7e-06 58.2 49 53.1
unitig_85.g27314 Utricularia gibba HOM05D003806 ORTHO05D004346 8.7e-06 57.8 101 35.6


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