Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 2.3e-136 488.8 236 100.0
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-87 324.3 278 65.8
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 4.5e-79 298.5 196 78.6
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 6.5e-78 294.7 207 75.4
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-73 280.4 245 64.5
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 6.3e-73 278.1 207 72.5
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.7e-65 253.4 209 67.9
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 2.8e-65 252.7 212 67.0
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 1.1e-64 250.8 208 66.3
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 1.1e-64 250.8 210 66.7
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-64 250.0 171 78.4
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 7.7e-63 244.6 210 65.7
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 8.5e-62 241.1 210 64.8
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 7.2e-61 238.0 191 69.6
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 7.2e-61 238.0 191 69.6
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 7.2e-61 238.0 191 69.6
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-60 237.3 200 67.5
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 1.2e-60 237.3 211 61.6
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 2.1e-60 236.5 175 74.9
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 1.0e-59 234.2 181 68.0
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-59 233.4 203 65.0
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-59 233.0 180 69.4
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.1e-58 230.7 217 63.6
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-58 229.9 203 65.5
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-57 226.5 171 73.1
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-57 226.5 171 73.1
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 8.2e-57 224.6 221 58.4
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-56 223.4 171 72.5
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 5.3e-56 221.9 207 59.9
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 7.0e-56 221.5 232 55.6
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 9.1e-56 221.1 215 58.1
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 9.1e-56 221.1 197 65.5
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 9.1e-56 221.1 210 61.4
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-55 219.9 187 66.8
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-55 219.5 207 58.9
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 1.0e-54 217.6 207 59.4
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.0e-54 217.6 207 59.4
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.0e-54 217.6 207 59.4
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.0e-54 217.6 207 59.4
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.0e-54 217.6 207 59.4
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 1.9e-53 213.4 224 56.7
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 4.2e-53 212.2 205 59.0
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.1e-52 209.9 205 58.5
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.7e-52 209.5 205 58.5
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-52 208.8 173 66.5
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-52 208.8 199 59.8
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 8.0e-52 208.0 172 68.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 4.0e-51 205.7 195 61.0
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.8e-51 204.9 202 57.9
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-51 204.9 189 64.0
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 6.8e-51 204.9 208 59.1
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 8.8e-51 204.5 189 64.0
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 1.2e-50 204.1 196 60.2
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 4.4e-50 202.2 212 58.5
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.8e-50 201.1 207 56.5
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 4.8e-49 198.7 207 56.0
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 1.4e-48 197.2 205 58.0
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 9.1e-48 194.5 192 56.2
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 1.5e-45 187.2 201 57.7
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-44 183.7 177 60.5
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.1e-44 183.3 204 54.4
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 1.4e-43 180.6 197 54.8
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-43 180.6 151 67.5
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-42 177.6 209 51.7
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 5.7e-42 175.3 184 56.5
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-40 169.9 181 57.5
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.0e-39 166.8 218 49.5
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 2.5e-37 159.8 220 48.6
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 7.2e-37 158.3 173 57.2
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 6.1e-36 155.2 116 71.6
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 2.3e-35 153.3 114 76.3
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.2e-34 151.0 367 34.6
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-33 147.1 112 73.2
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.2e-33 146.7 238 44.1
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.8e-32 143.7 153 54.2
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 7.0e-32 141.7 104 73.1
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 5.0e-30 135.6 93 76.3
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 7.3e-29 131.7 95 73.7
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 1.2e-28 131.0 189 45.0
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.6e-28 130.6 150 52.7
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-27 126.7 105 67.6
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-27 125.2 76 84.2
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.0e-26 123.6 156 48.7
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 2.6e-26 123.2 203 40.9
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-25 119.8 76 78.9
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.9e-24 117.1 90 71.1
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 3.2e-24 116.3 79 73.4
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 1.2e-23 114.4 145 47.6
SHI47987 Sapria himalayana HOM05D003467 ORTHO05D020467 1.6e-23 114.0 64 81.2
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-23 113.6 63 88.9
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 7.8e-23 111.7 206 43.2
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 3.0e-22 109.8 191 40.8
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 3.9e-22 109.4 191 44.0
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 1.8e-19 100.5 177 43.5
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 1.5e-18 97.4 201 34.8
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 3.4e-18 96.3 188 39.4
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.3e-17 94.4 200 37.5
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.3e-17 94.4 200 37.5
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.7e-17 94.0 196 36.2
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.9e-17 92.4 52 90.4
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 6.4e-17 92.0 133 44.4
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 8.3e-17 91.7 128 44.5
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-16 90.9 56 75.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 3.2e-16 89.7 133 43.6
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 4.1e-16 89.4 149 43.6
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.4e-16 89.0 192 37.0
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 7.1e-16 88.6 133 44.4
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 9.2e-16 88.2 191 35.6
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 7.8e-15 85.1 57 77.2
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-14 83.6 95 53.7
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 3.0e-14 83.2 186 32.3
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 5.1e-14 82.4 190 30.0
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 8.6e-14 81.6 191 35.1
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-13 80.9 49 79.6
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 2.5e-13 80.1 187 36.4
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-12 77.4 50 74.0
unitig_22.g5752 Utricularia gibba HOM05D003467 ORTHO05D004220 1.6e-12 77.4 70 62.9
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 4.7e-12 75.9 209 31.1
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-11 73.9 49 77.6
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 4.0e-11 72.8 202 31.7
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-10 71.2 114 42.1
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.5e-10 70.9 47 70.2
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 2.6e-10 70.1 51 64.7
SHI38787 Sapria himalayana HOM05D003467 ORTHO05D020467 9.9e-10 68.2 55 58.2
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-09 67.4 49 67.3
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-09 67.4 129 39.5
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.2e-09 67.0 37 83.8
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.9e-08 63.9 217 28.1
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 1.9e-08 63.9 147 29.3
SHI18368 Sapria himalayana HOM05D003467 ORTHO05D004220 9.2e-08 61.6 57 59.6
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 1.2e-07 61.2 220 28.6
ClCG11G007190 Citrullus lanatus HOM05D003467 ORTHO05D020467 2.1e-07 60.5 27 96.3
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 2.7e-07 60.1 184 32.1
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-06 57.4 67 47.8
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-06 57.4 71 46.5


User provided reference genes

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