Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.1e-107 393.3 202 100.0
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.1e-107 393.3 202 100.0
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 9.7e-99 363.6 202 90.6
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-97 359.8 202 90.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 7.0e-97 357.5 202 91.6
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 2.6e-96 355.5 202 90.1
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 7.7e-96 354.0 202 90.1
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 7.7e-96 354.0 202 90.1
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.7e-96 354.0 202 90.1
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.7e-96 354.0 202 90.1
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.0e-95 353.6 202 89.1
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 3.8e-95 351.7 202 88.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 5.0e-95 351.3 202 88.6
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 87.1
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 88.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.9e-94 349.4 202 88.6
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 5.5e-94 347.8 202 88.6
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 9.4e-94 347.1 202 87.6
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 2.7e-93 345.5 202 88.6
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.0e-93 344.0 202 87.1
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 87.6
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.0e-92 342.0 202 88.1
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.2e-91 340.1 202 87.6
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.5e-91 339.7 202 87.6
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.6e-88 329.7 202 84.2
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 7.7e-88 327.4 204 85.3
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-87 327.0 204 86.3
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-87 327.0 204 86.3
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.3e-87 326.6 202 84.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 80.2
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.5e-83 310.8 202 81.2
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.4e-81 306.6 199 79.4
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.3e-79 300.1 184 81.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 3.8e-79 298.5 182 86.3
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 2.8e-77 292.4 200 75.0
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.8e-76 289.7 182 83.5
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.2e-75 287.0 182 82.4
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 3.7e-74 282.0 182 78.0
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 2.7e-72 275.8 158 89.2
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.9e-70 269.6 172 79.7
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 3.1e-68 262.3 177 76.3
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 4.9e-66 255.0 202 70.3
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 3.2e-65 252.3 151 86.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 1.5e-62 243.4 138 87.7
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.3e-62 241.9 148 85.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 3.6e-61 238.8 208 63.5
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.2e-61 238.0 156 82.1
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 6.8e-60 234.6 163 77.3
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 3.0e-55 219.2 132 86.4
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 6.8e-52 208.0 149 73.2
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 2.0e-51 206.5 114 86.8
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-50 203.8 114 89.5
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-50 203.8 114 89.5
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 4.9e-50 201.8 114 87.7
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 4.9e-50 201.8 114 87.7
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 4.9e-50 201.8 114 87.7
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 4.9e-50 201.8 114 87.7
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 4.9e-50 201.8 114 87.7
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.1e-49 198.7 114 87.7
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.0e-47 194.1 114 84.2
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.3e-47 193.7 101 100.0
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.9e-47 192.2 114 84.2
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 6.6e-47 191.4 129 80.6
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.6e-47 191.0 114 83.3
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.1e-44 184.1 114 78.9
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 2.6e-43 179.5 103 84.5
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 2.9e-42 176.0 103 85.4
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 5.4e-41 171.8 103 81.6
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.7e-40 169.5 101 85.1
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.0e-40 168.3 102 80.4
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-39 167.2 103 81.6
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 3.9e-39 165.6 103 80.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.9e-38 163.3 103 79.6
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.3e-38 161.4 90 87.8
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 6.9e-36 154.8 94 75.5
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.3e-34 150.6 141 60.3
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-32 143.7 77 93.5
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.5e-32 142.5 190 48.4
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.5e-32 142.5 190 48.4
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 6.0e-32 141.7 89 76.4
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.3e-29 134.0 104 68.3
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.3e-28 128.6 70 92.9
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 6.9e-28 128.3 108 66.7
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 3.4e-27 125.9 75 80.0
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.5e-27 125.6 72 84.7
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 6.4e-26 121.7 68 83.8
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 1.9e-25 120.2 64 93.8
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 7.1e-25 118.2 74 78.4
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 7.1e-25 118.2 74 78.4
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 7.1e-25 118.2 77 75.3
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-24 116.3 67 85.1
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 3.0e-23 112.8 66 81.8
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 1.1e-22 110.9 79 74.7
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.4e-22 108.2 87 71.3
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.6e-21 107.1 64 84.4
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.8e-21 105.5 77 80.5
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 5.3e-20 102.1 61 80.3
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 9.0e-20 101.3 62 79.0
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 1.2e-19 100.9 66 72.7
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 7.6e-19 98.2 50 94.0
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 2.9e-18 96.3 49 93.9
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 3.2e-17 92.8 64 70.3
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 1.3e-15 87.4 52 88.5
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.3e-15 87.4 109 51.4
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.3e-15 86.7 48 85.4
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.3e-14 82.8 55 70.9
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-13 80.1 41 95.1
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-13 79.0 43 88.4
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-13 79.0 43 88.4
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-13 79.0 43 88.4
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-13 79.0 43 88.4
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 4.8e-13 79.0 104 50.0
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.8e-12 77.0 46 78.3
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 5.8e-11 72.0 42 81.0
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-10 70.5 48 77.1
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 2.2e-10 70.1 58 65.5
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 5.0e-10 68.9 36 97.2
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-09 67.0 37 89.2
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 3.5e-08 62.8 40 77.5


User provided reference genes

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