Gene: ATCG00380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier ATCG00380
  • Transcript Identifier ATCG00380.1
  • Gene Type Coding gene
  • Location ChrC : 45223-45828 : negative

Gene Family Information

  • ID HOM05D005573
  • #Genes/#Species 138/45
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ATCG00380.1
  • symbol RPS4
  • uniprot P56799

Descriptions

  • Description chloroplast ribosomal protein S4
  • Computational description chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
TAS
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0045903
IBA
GOA Databasepositive regulation of translational fidelity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0019843
IBA
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
TAS
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IBA
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0000312
TAS
Gene Ontologyplastid small ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid2
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009570
IDA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036986 RNA-binding S4 domain superfamily
IPR002942 RNA-binding S4 domain
IPR005709 Ribosomal protein S4, bacterial-type
IPR001912 Ribosomal protein S4/S9, N-terminal
IPR022801 Ribosomal protein S4/S9
Mapman id Description
17.7.2.2.4 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS4