Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 1.8e-81 305.8 151 100.0
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 5.1e-52 208.0 102 94.1
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 5.1e-52 208.0 102 94.1
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 5.1e-52 208.0 102 94.1
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 1.9e-51 206.1 102 92.2
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 7.4e-51 204.1 102 92.2
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 7.4e-51 204.1 102 92.2
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 7.4e-51 204.1 102 92.2
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 7.4e-51 204.1 102 92.2
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 9.6e-51 203.8 102 91.2
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 1.6e-50 203.0 102 91.2
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 2.1e-50 202.6 101 92.1
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 2.8e-50 202.2 101 91.1
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 2.8e-50 202.2 102 91.2
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 3.7e-50 201.8 102 90.2
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 4.8e-50 201.4 102 88.2
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 4.8e-50 201.4 102 92.2
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 4.8e-50 201.4 102 92.2
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.2e-50 201.1 102 91.2
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 6.2e-50 201.1 102 89.2
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 6.2e-50 201.1 102 90.2
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 8.1e-50 200.7 102 92.2
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 8.1e-50 200.7 102 92.2
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-49 200.3 102 91.2
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-49 200.3 102 91.2
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.1e-49 200.3 102 91.2
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.1e-49 200.3 102 91.2
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.4e-49 199.9 102 90.2
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.4e-49 199.9 102 90.2
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 2.4e-49 199.1 102 89.2
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.4e-49 199.1 102 90.2
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 2.4e-49 199.1 102 90.2
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 2.4e-49 199.1 99 91.9
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 3.1e-49 198.7 102 90.2
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.1e-49 198.7 102 90.2
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 3.1e-49 198.7 102 90.2
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 4.0e-49 198.4 102 88.2
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 5.3e-49 198.0 102 90.2
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 6.9e-49 197.6 102 89.2
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 6.9e-49 197.6 102 89.2
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 6.9e-49 197.6 98 93.9
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 6.9e-49 197.6 102 89.2
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 6.9e-49 197.6 102 89.2
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 9.0e-49 197.2 95 94.7
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.2e-48 196.8 102 89.2
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.2e-48 196.8 102 89.2
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.5e-48 196.4 102 88.2
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 2.0e-48 196.1 102 87.3
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 2.0e-48 196.1 102 89.2
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 2.0e-48 196.1 101 89.1
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 2.6e-48 195.7 102 87.3
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 4.5e-48 194.9 102 85.3
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 5.8e-48 194.5 101 87.1
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 5.8e-48 194.5 101 86.1
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 7.6e-48 194.1 102 87.3
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 7.6e-48 194.1 102 87.3
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.9e-47 192.2 102 84.3
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 2.9e-47 192.2 101 87.1
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 2.9e-47 192.2 101 87.1
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 3.8e-47 191.8 101 86.1
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.8e-47 191.8 102 86.3
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 6.5e-47 191.0 101 85.1
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 6.5e-47 191.0 101 85.1
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 6.5e-47 191.0 101 85.1
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 8.4e-47 190.7 101 86.1
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 8.4e-47 190.7 101 88.1
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.9e-46 189.5 102 84.3
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 3.2e-46 188.7 101 85.1
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 5.5e-46 188.0 96 88.5
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 7.1e-46 187.6 95 89.5
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.6e-45 186.4 95 89.5
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 1.6e-45 186.4 95 89.5
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 6.0e-45 184.5 102 83.3
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 7.9e-45 184.1 95 87.4
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 7.9e-45 184.1 109 78.9
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 1.8e-44 183.0 102 84.3
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 3.9e-44 181.8 101 82.2
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 8.7e-44 180.6 101 82.2
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.5e-43 179.9 101 81.2
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 1.9e-43 179.5 101 81.2
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 2.5e-43 179.1 101 81.2
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 4.3e-43 178.3 101 80.2
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 5.7e-43 177.9 101 82.2
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 5.7e-43 177.9 101 82.2
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 5.7e-43 177.9 101 82.2
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 5.7e-43 177.9 101 79.2
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 5.7e-43 177.9 102 78.4
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 9.6e-43 177.2 101 80.2
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 1.6e-42 176.4 101 81.2
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.8e-42 175.6 102 78.4
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 3.7e-42 175.3 96 83.3
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 8.2e-42 174.1 95 85.3
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 3.1e-41 172.2 101 75.2
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 3.1e-41 172.2 101 75.2
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 1.5e-40 169.9 97 79.4
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 2.0e-40 169.5 83 92.8
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 2.0e-40 169.5 83 92.8
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-39 166.0 83 91.6
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 3.8e-39 165.2 101 73.3
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.4e-38 163.3 83 88.0
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.4e-38 163.3 83 88.0
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.4e-38 163.3 86 88.4
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 3.2e-38 162.2 84 86.9
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 4.2e-38 161.8 96 82.3
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 3.6e-37 158.7 83 85.5
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 2.3e-36 156.0 77 89.6
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 2.2e-34 149.4 95 77.9
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.4e-33 146.7 108 64.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 2.0e-32 142.9 80 82.5
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 7.7e-32 141.0 87 78.2
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.9e-28 128.6 84 75.0
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 3.1e-25 119.0 110 50.0
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 3.4e-24 115.5 90 60.0
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 1.6e-21 106.7 89 53.9
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 7.9e-21 104.4 60 83.3
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.8e-20 103.2 53 84.9
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 6.3e-18 94.7 48 87.5
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 8.2e-18 94.4 48 87.5
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.8e-17 93.2 48 85.4
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.9e-14 83.2 105 43.8
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 4.7e-13 78.6 48 70.8
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 2.3e-12 76.3 43 81.4


User provided reference genes

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