Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 3.6e-138 495.0 263 100.0
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 4.2e-126 454.9 257 87.9
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 4.6e-125 451.4 257 87.2
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.1e-113 411.8 220 91.8
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 5.7e-107 391.3 231 81.8
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.4e-105 386.0 231 81.4
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 2.6e-104 382.5 253 73.5
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 7.7e-104 380.9 233 78.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.0e-103 380.6 231 80.1
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.2e-103 379.4 229 79.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 6.5e-103 377.9 234 79.5
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 6.5e-103 377.9 231 77.1
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.1e-102 377.1 230 80.4
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.9e-102 376.3 233 78.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 4.2e-102 375.2 229 78.2
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 5.5e-102 374.8 231 77.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 5.5e-102 374.8 234 76.9
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 7.2e-102 374.4 259 70.3
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.1e-101 372.9 229 80.3
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.1e-101 372.9 229 80.3
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.1e-101 372.9 231 75.3
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.7e-101 372.5 231 77.5
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 2.7e-101 372.5 229 78.2
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.6e-101 371.7 229 79.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 6.1e-101 371.3 228 76.3
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.0e-100 370.5 232 79.3
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.0e-100 369.0 229 77.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.9e-100 368.6 229 79.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 5.1e-100 368.2 231 78.4
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.1e-100 368.2 230 78.7
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 6.7e-100 367.9 239 74.9
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 233 77.3
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.5e-99 366.7 254 70.5
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.0e-99 366.3 229 79.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.3e-99 365.5 233 76.8
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.3e-99 365.5 231 76.6
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.3e-99 365.5 229 76.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 4.4e-99 365.2 231 76.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 4.4e-99 365.2 233 76.8
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 5.7e-99 364.8 232 75.9
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.2e-98 362.8 232 77.6
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 4.8e-98 361.7 233 76.0
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.3e-98 361.3 233 74.7
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.1e-97 360.5 238 73.9
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.1e-97 359.0 231 74.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.3e-97 358.2 246 73.6
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.2e-96 357.1 222 78.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.2e-96 357.1 240 72.5
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-96 356.3 239 72.8
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.0e-95 354.0 240 72.1
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.0e-95 354.0 257 70.4
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.3e-95 353.6 241 72.2
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.3e-95 353.6 229 75.1
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.7e-95 353.2 238 72.3
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.9e-95 352.4 231 77.1
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.9e-95 352.4 233 74.2
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 6.5e-95 351.3 240 72.1
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 6.5e-95 351.3 231 72.7
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.5e-95 351.3 229 72.1
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.9e-94 349.7 237 71.7
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.9e-94 349.7 258 69.4
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 3.2e-94 349.0 229 74.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 3.2e-94 349.0 229 71.6
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 4.2e-94 348.6 240 70.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 9.4e-94 347.4 240 70.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 9.4e-94 347.4 231 72.3
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.2e-93 347.1 245 68.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.6e-93 346.7 229 72.5
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.1e-93 346.3 240 70.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.1e-93 346.3 229 70.7
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.7e-93 345.9 229 71.2
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.7e-93 345.1 238 71.0
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.7e-93 345.1 233 72.5
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.1e-93 344.7 229 73.4
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-92 343.6 241 71.0
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-92 343.6 233 71.2
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.8e-92 343.2 233 71.7
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.9e-92 342.0 234 70.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 5.2e-92 341.7 243 69.5
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 5.2e-92 341.7 243 69.5
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.5e-91 340.1 233 70.8
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.0e-91 339.7 213 77.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 2.6e-91 339.3 230 71.7
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 6.3e-90 334.7 222 73.0
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.8e-89 333.2 230 70.4
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 7.0e-89 331.3 215 76.3
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.6e-88 329.3 209 76.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.5e-88 328.9 252 66.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 2.2e-87 326.2 237 68.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 2.2e-87 326.2 305 57.7
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 2.9e-87 325.9 211 75.8
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.8e-87 325.5 233 67.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.0e-87 325.1 237 67.9
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.7e-85 319.3 237 65.4
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.0e-84 315.5 297 54.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 5.2e-84 315.1 215 72.6
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 7.5e-83 311.2 211 73.0
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 5.3e-81 305.1 209 69.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 5.9e-80 301.6 201 73.1
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.8e-79 298.9 200 75.5
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 3.7e-74 282.3 305 52.1
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 5.5e-70 268.5 226 61.1
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 9.5e-70 267.7 199 65.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.6e-64 250.4 175 73.1
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.5e-62 243.8 168 75.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.6e-61 240.4 233 53.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.1e-61 240.0 228 52.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 7.0e-57 224.9 231 52.4
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.5e-56 222.6 225 52.0
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 6.0e-56 221.9 136 76.5
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.1e-49 201.1 147 69.4
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.9e-47 192.6 137 68.6
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.2e-44 182.2 145 64.1
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 3.4e-43 179.5 143 64.3
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.7e-42 177.2 143 63.6
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.7e-42 176.0 95 83.2
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.6e-40 169.1 115 74.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 9.5e-38 161.4 175 50.9
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 4.4e-35 152.5 123 63.4
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.4e-33 146.7 96 74.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.0e-31 141.4 95 74.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-28 131.3 79 77.2
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 4.9e-26 122.5 66 78.8
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.2e-21 105.5 98 55.1
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.2e-17 92.8 47 83.0
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 3.3e-14 83.2 269 26.4
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 4.9e-10 69.3 114 41.2
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 6.4e-10 68.9 114 41.2


User provided reference genes

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