Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 6.0e-200 700.7 359 100.0
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.1e-172 608.6 360 86.7
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.9e-170 602.1 359 85.5
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.4e-169 599.0 360 85.3
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.0e-151 540.4 356 76.4
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.5e-150 536.6 356 76.1
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.3e-149 533.5 349 77.4
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.6e-149 533.1 352 77.3
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 6.3e-149 531.2 358 76.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.3e-149 531.2 351 77.2
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.4e-148 530.0 358 75.4
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.8e-148 529.6 358 75.7
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 3.1e-148 528.9 358 75.4
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.3e-148 528.1 357 74.8
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 9.0e-148 527.3 352 77.3
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.2e-147 526.9 357 75.4
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.5e-147 526.6 350 76.3
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.6e-147 525.8 354 75.7
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 4.5e-147 525.0 357 75.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.5e-147 525.0 357 75.4
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.7e-147 524.2 357 75.1
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.0e-146 523.9 357 73.9
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 2.9e-146 522.3 357 75.4
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.5e-146 521.2 358 74.0
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.1e-145 520.4 352 74.4
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 3.2e-145 518.8 354 75.1
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 3.2e-145 518.8 349 74.8
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 3.2e-145 518.8 354 74.6
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 7.2e-145 517.7 349 75.4
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.1e-144 516.2 354 72.9
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.6e-144 515.4 358 72.9
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 1.8e-143 513.1 356 74.7
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 5.1e-143 511.5 411 65.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 5.1e-143 511.5 362 72.1
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.7e-143 511.1 371 70.9
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 5.7e-142 508.1 363 71.1
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 9.7e-142 507.3 327 77.4
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.7e-141 506.5 352 72.7
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 4.8e-141 505.0 352 74.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 4.8e-141 505.0 362 70.2
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.8e-140 503.1 361 72.0
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.4e-140 502.7 352 72.7
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 3.1e-140 502.3 374 70.9
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.9e-140 501.1 386 68.9
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 9.1e-140 500.7 336 75.9
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.6e-139 499.2 357 70.6
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 4.5e-139 498.4 352 71.6
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 7.7e-139 497.7 359 70.2
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.2e-138 496.1 363 70.0
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.2e-138 496.1 355 71.0
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 3.8e-138 495.4 353 71.1
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 3.8e-138 495.4 362 69.3
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 3.8e-138 495.4 358 69.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 6.5e-138 494.6 353 71.4
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-137 493.4 359 70.5
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.9e-137 493.0 353 70.5
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.2e-137 492.3 329 75.1
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 5.5e-137 491.5 338 72.8
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 7.2e-137 491.1 353 70.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 9.4e-137 490.7 357 68.9
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.1e-136 489.6 344 72.1
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.7e-136 489.2 359 69.6
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.7e-136 489.2 347 70.6
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.7e-136 489.2 361 69.8
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.8e-135 486.5 351 70.1
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.8e-135 486.5 351 70.1
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 2.3e-135 486.1 355 69.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.6e-134 482.6 352 68.8
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.6e-134 482.6 357 68.6
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.6e-134 482.6 345 71.0
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 7.4e-134 481.1 378 66.9
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.7e-134 480.7 324 73.5
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.3e-133 478.0 357 68.1
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-132 476.9 349 69.6
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.8e-132 476.5 307 77.5
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 3.1e-132 475.7 350 68.0
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.2e-130 469.5 339 70.2
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.9e-130 469.2 353 68.6
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.9e-130 469.2 380 63.7
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 6.5e-130 468.0 333 71.8
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 9.4e-129 464.2 325 72.0
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 2.7e-128 462.6 360 65.3
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.9e-127 458.8 326 70.9
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 5.2e-127 458.4 337 69.1
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.1e-126 457.2 353 68.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 1.5e-126 456.8 336 71.1
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.5e-126 456.8 321 70.7
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.0e-126 456.4 339 68.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.0e-126 456.4 330 70.3
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 2.0e-126 456.4 336 69.0
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 7.4e-126 454.5 325 70.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 9.7e-126 454.1 325 69.8
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.3e-125 453.8 315 72.1
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.7e-125 453.4 348 65.5
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-125 453.4 343 67.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.2e-125 453.0 349 65.0
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.1e-124 450.7 345 68.4
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.1e-124 450.7 342 66.7
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.4e-124 450.3 370 63.8
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.1e-124 449.1 325 69.5
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 4.1e-124 448.7 326 68.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.3e-124 448.4 333 67.0
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 2.0e-123 446.4 325 68.0
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.6e-123 446.0 330 66.1
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 3.5e-123 445.7 324 67.6
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 4.5e-123 445.3 325 68.0
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 5.9e-123 444.9 338 68.6
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 5.9e-123 444.9 324 67.3
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 5.9e-123 444.9 358 62.6
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 2.2e-122 443.0 325 69.2
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.9e-122 442.6 325 67.7
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 6.5e-122 441.4 331 66.2
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 8.5e-122 441.0 325 67.4
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 8.5e-122 441.0 360 64.4
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 8.5e-122 441.0 268 81.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.9e-121 439.9 358 65.4
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.9e-121 439.9 353 62.9
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.4e-121 437.6 316 69.3
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 9.4e-121 437.6 381 59.6
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.6e-120 436.8 352 64.8
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 5.7e-118 428.3 296 75.3
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.5e-118 427.9 324 64.5
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.3e-117 427.2 348 63.2
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 6.3e-117 424.9 343 64.4
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 8.3e-117 424.5 328 66.2
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 5.3e-116 421.8 330 66.4
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.0e-116 421.4 315 67.3
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 7.7e-115 417.9 281 75.8
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 8.8e-111 404.4 527 45.4
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 7.5e-110 401.4 262 76.0
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 9.2e-100 367.9 326 61.0
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 7.3e-97 358.2 347 53.9
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.2e-96 357.5 341 53.1
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 7.5e-94 348.2 225 75.6
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 9.5e-89 331.3 232 72.0
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 3.6e-88 329.3 293 55.6
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-87 327.0 276 62.0
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 5.2e-87 325.5 247 66.8
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.6e-83 312.4 208 75.5
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.5e-81 306.6 267 60.3
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.1e-79 301.2 215 71.2
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.3e-79 300.1 199 74.4
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.1e-73 281.2 162 85.2
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.3e-73 279.3 192 72.9
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 7.1e-68 261.9 379 41.2
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.5e-57 226.9 191 61.8
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 2.1e-56 223.8 186 62.4
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 4.8e-56 222.6 208 56.7
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.4e-55 220.3 161 68.9
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.6e-54 216.9 154 68.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.0e-50 204.9 277 44.4
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 2.3e-50 203.8 329 40.7
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.9e-47 192.2 146 68.5
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.5e-41 174.5 145 62.1
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 5.5e-36 156.0 107 75.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.8e-29 133.3 304 33.6
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.5e-28 130.6 252 34.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 2.1e-27 127.5 384 30.5
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.3e-24 118.2 63 87.3
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-23 115.2 128 50.0
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.3e-21 108.2 141 46.1
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.1e-17 95.1 60 80.0
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.7e-16 91.3 57 71.9
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.8e-16 90.5 59 72.9
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.1e-15 88.6 96 52.1
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 4.1e-15 86.7 66 63.6
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.8e-08 63.9 81 44.4
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 5.9e-06 56.2 53 50.9


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