Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 2.4e-102 375.6 193 100.0
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 2.6e-16 89.7 250 34.0
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 9.8e-16 87.8 253 34.8
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.3e-15 87.4 251 33.5
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 2.2e-15 86.7 253 34.4
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 4.6e-13 79.0 257 31.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 3.3e-11 72.8 257 30.4
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 9.5e-11 71.2 257 30.0
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 2.1e-10 70.1 260 29.6
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 6.2e-10 68.6 262 29.0
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.1e-09 67.8 260 28.8
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.8e-09 67.0 255 29.4
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 3.1e-09 66.2 261 29.9
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 3.1e-09 66.2 254 30.3
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 5.2e-09 65.5 254 29.5
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 2.6e-08 63.2 255 29.4
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 7.6e-08 61.6 256 29.3
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.3e-07 60.8 252 29.4
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.7e-07 60.5 261 28.0
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 1.7e-07 60.5 252 30.2
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 1.7e-07 60.5 258 27.1
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.9e-07 58.9 125 36.0
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.9e-07 58.9 125 36.0
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 4.9e-07 58.9 223 28.3
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 6.4e-07 58.5 253 28.5
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 6.4e-07 58.5 254 28.3
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 8.4e-07 58.2 126 34.9
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 8.4e-07 58.2 253 27.3
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 1.1e-06 57.8 126 36.5
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.4e-06 57.4 251 28.7
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.4e-06 57.4 252 29.0
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 1.4e-06 57.4 205 30.2
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.4e-06 57.4 205 30.2
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.4e-06 57.4 205 30.2
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 1.9e-06 57.0 252 29.0
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.9e-06 57.0 252 29.0
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.4e-06 56.6 257 27.6
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 3.2e-06 56.2 251 26.7
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 4.1e-06 55.8 257 28.4
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 7.1e-06 55.1 252 28.6
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 7.1e-06 55.1 126 34.9
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 9.2e-06 54.7 205 28.3


User provided reference genes

Program Settings