Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 5.4e-150 534.6 341 100.0
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 5.3e-97 358.6 345 75.7
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 5.8e-96 355.1 341 73.6
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.1e-94 350.9 355 71.0
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 4.8e-66 255.8 263 58.2
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 6.3e-66 255.4 269 56.9
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.6e-64 250.8 259 57.9
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 2.2e-63 246.9 268 57.1
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 3.8e-63 246.1 305 57.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 2.5e-62 243.4 261 60.5
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 4.2e-62 242.7 256 59.8
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 5.5e-62 242.3 310 57.1
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.4e-60 237.7 273 56.4
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 1.4e-60 237.7 273 55.3
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.8e-60 237.3 273 57.5
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.8e-60 237.3 256 57.4
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 5.2e-60 235.7 268 61.2
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 1.2e-59 234.6 267 60.3
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.2e-59 234.6 336 52.4
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 3.3e-59 233.0 266 59.4
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 5.7e-59 232.3 272 60.3
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 5.7e-59 232.3 272 60.3
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 7.5e-59 231.9 262 51.5
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.3e-58 231.1 266 60.5
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.7e-58 230.7 267 64.4
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 2.2e-58 230.3 314 58.9
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.2e-58 230.3 272 62.1
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 3.7e-58 229.6 268 56.3
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 1.4e-57 227.6 263 55.1
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 2.4e-57 226.9 266 64.3
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.1e-57 226.5 270 57.4
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.2e-56 224.6 271 62.7
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.6e-56 224.2 257 55.3
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.7e-56 223.4 273 56.8
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 4.5e-56 222.6 253 53.4
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 7.7e-56 221.9 320 54.1
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.0e-55 221.5 289 59.5
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.3e-55 221.1 262 59.9
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.7e-55 220.7 291 47.8
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 2.2e-55 220.3 266 53.8
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 3.8e-55 219.5 255 50.6
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 6.5e-55 218.8 256 50.8
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 8.5e-55 218.4 276 47.8
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.1e-54 218.0 274 56.9
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.1e-54 218.0 251 58.2
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.1e-54 218.0 267 50.6
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.5e-54 216.9 276 49.3
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.2e-54 216.5 305 46.6
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 4.2e-54 216.1 277 50.2
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 5.5e-54 215.7 260 51.9
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.2e-53 214.5 287 56.4
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.2e-53 214.5 268 60.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 2.1e-53 213.8 285 58.9
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 3.6e-53 213.0 255 54.1
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 4.7e-53 212.6 249 54.2
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 6.1e-53 212.2 315 51.7
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 6.1e-53 212.2 252 56.7
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 8.0e-53 211.8 256 59.4
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 8.0e-53 211.8 256 55.5
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.0e-52 211.5 309 49.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 1.0e-52 211.5 324 44.1
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 1.8e-52 210.7 245 51.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.3e-52 210.3 252 55.6
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 3.0e-52 209.9 287 57.8
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 3.0e-52 209.9 259 53.7
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 4.0e-52 209.5 259 59.5
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 8.8e-52 208.4 257 55.6
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 8.8e-52 208.4 272 52.2
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.2e-51 208.0 257 56.8
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.0e-51 207.2 267 52.8
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 2.6e-51 206.8 253 55.3
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 2.6e-51 206.8 254 54.3
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 3.4e-51 206.5 258 57.4
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 3.4e-51 206.5 283 53.4
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 9.8e-51 204.9 251 56.6
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.3e-50 204.5 255 56.5
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.7e-50 204.1 258 47.7
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.2e-50 203.8 268 53.0
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.8e-50 203.4 281 48.0
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 2.8e-50 203.4 259 52.5
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.1e-49 201.4 179 63.7
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 1.4e-49 201.1 245 53.1
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 1.8e-49 200.7 269 46.8
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 4.1e-49 199.5 170 62.4
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 7.0e-49 198.7 272 47.4
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 7.0e-49 198.7 254 62.2
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.2e-48 198.0 251 48.6
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 7.7e-48 195.3 262 48.1
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.3e-47 194.5 171 59.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 2.9e-47 193.4 252 48.4
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 9.5e-46 188.3 295 44.7
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 2.1e-45 187.2 251 48.2
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.0e-44 184.9 160 63.8
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.0e-44 184.9 255 53.3
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 1.5e-43 181.0 212 53.3
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 7.5e-43 178.7 152 61.8
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.8e-41 174.1 161 62.1
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.5e-40 169.5 153 63.4
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.9e-38 164.1 219 59.4
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 5.7e-35 152.5 246 50.8
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 5.4e-33 146.0 222 56.3
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.5e-32 143.3 125 64.0
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 3.0e-23 113.6 164 42.1
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 5.0e-23 112.8 155 43.9
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 3.1e-20 103.6 114 53.5
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 5.2e-20 102.8 255 41.2
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 1.1e-17 95.1 118 49.2
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 9.5e-14 82.0 224 34.4
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 4.7e-13 79.7 55 67.3
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 8.4e-10 68.9 42 66.7
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.4e-09 68.2 56 48.2
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 7.1e-09 65.9 85 51.8
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 9.2e-09 65.5 175 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 2.3e-07 60.8 139 36.0


User provided reference genes

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