Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 1.2e-92 343.2 171 100.0
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.2e-92 343.2 171 100.0
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 3.5e-89 331.6 170 97.1
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 2.2e-88 328.9 170 95.9
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.8e-88 328.2 170 95.3
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.8e-88 328.2 170 95.3
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 3.8e-88 328.2 170 95.3
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 3.8e-88 328.2 170 95.3
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 3.8e-88 328.2 170 95.3
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 8.5e-88 327.0 170 94.7
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 1.5e-87 326.2 170 95.9
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 3.2e-87 325.1 170 94.7
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 3.2e-87 325.1 170 96.5
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 3.2e-87 325.1 170 94.7
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 7.2e-87 323.9 170 95.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 7.2e-87 323.9 170 95.3
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 1.2e-86 323.2 170 95.3
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 3.6e-86 321.6 170 94.7
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 6.1e-86 320.9 170 94.1
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.4e-85 319.7 170 95.3
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 1.8e-85 319.3 170 94.1
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 3.0e-85 318.5 170 92.9
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 8.8e-85 317.0 170 93.5
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 8.8e-85 317.0 170 93.5
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 8.8e-85 317.0 170 93.5
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 1.5e-84 316.2 170 92.4
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.5e-84 316.2 166 94.6
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 2.0e-84 315.8 170 93.5
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 2.0e-84 315.8 170 94.1
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 5.7e-84 314.3 170 94.1
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 7.5e-84 313.9 170 92.4
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 7.5e-84 313.9 170 92.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.3e-83 313.2 170 92.4
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.3e-83 313.2 170 92.4
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-83 313.2 170 92.4
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-83 313.2 170 92.4
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.4e-82 308.9 170 92.4
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 3.1e-82 308.5 170 91.2
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 5.4e-82 307.8 170 90.6
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 1.6e-81 306.2 170 89.4
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 3.5e-81 305.1 160 94.4
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 4.5e-81 304.7 170 91.2
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.9e-81 304.3 170 90.0
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 1.5e-79 299.7 169 89.3
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 2.1e-78 295.8 169 88.8
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 2.1e-78 295.8 170 90.0
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-78 295.8 169 88.2
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 4.7e-78 294.7 170 88.2
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.5e-76 289.7 171 84.8
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 6.3e-75 284.3 170 86.5
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 8.3e-75 283.9 157 91.1
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 1.1e-74 283.5 170 87.1
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 7.8e-73 277.3 141 95.7
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 7.8e-73 277.3 141 95.7
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 8.0e-70 267.3 147 89.1
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.2e-68 263.5 168 81.5
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 3.7e-67 258.5 141 92.2
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 6.4e-67 257.7 138 92.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.9e-66 256.1 133 94.0
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 2.0e-65 252.7 137 90.5
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.2e-62 243.4 147 85.7
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.8e-62 242.3 141 84.4
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 1.7e-59 233.0 137 85.4
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.1e-58 228.4 147 79.6
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.2e-57 226.9 122 92.6
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.6e-57 226.5 125 89.6
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.6e-56 221.1 148 79.7
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 6.6e-56 221.1 112 93.8
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.7e-51 206.5 118 87.3
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 2.7e-49 199.1 127 81.9
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 9.6e-47 190.7 119 80.7
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 1.2e-44 183.7 107 88.8
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 7.6e-44 181.0 136 71.3
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.2e-43 179.5 98 88.8
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 4.9e-43 178.3 108 82.4
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.3e-40 170.2 88 92.0
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.9e-40 168.7 97 86.6
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 4.3e-39 165.2 94 89.4
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 2.1e-38 162.9 101 83.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 3.2e-34 149.1 107 72.9
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 1.6e-33 146.7 73 94.5
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 2.7e-33 146.0 77 88.3
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 7.8e-33 144.4 157 58.0
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 1.3e-32 143.7 75 90.7
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 7.3e-31 137.9 69 92.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 8.1e-30 134.4 72 86.1
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.1e-29 132.5 68 91.2
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.5e-28 130.2 67 95.5
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 3.8e-27 125.6 79 78.5
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 6.0e-25 118.2 60 93.3
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 1.0e-24 117.5 126 46.0
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 2.3e-24 116.3 65 84.6
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.6e-23 111.7 69 79.7
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 6.0e-17 91.7 134 45.5
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 2.5e-15 86.3 48 93.8
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 4.8e-14 82.0 55 74.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 5.8e-12 75.1 48 83.3
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 5.8e-12 75.1 42 88.1
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 2.1e-09 66.6 37 89.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.1e-07 60.8 46 69.6
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 1.9e-07 60.1 44 72.7


User provided reference genes

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