Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000866 Sechium edule HOM05D001415 ORTHO05D001075 4.3e-36 154.1 74 100.0
Sed0008951 Sechium edule HOM05D001415 ORTHO05D001075 4.9e-24 114.0 76 72.4
ClCG09G019600 Citrullus lanatus HOM05D001415 ORTHO05D001075 4.8e-19 97.4 92 56.5
CsaV3_5G026780 Cucumis sativus L. HOM05D001415 ORTHO05D001075 1.8e-18 95.5 94 54.3
MELO3C021616.2 Cucumis melo HOM05D001415 ORTHO05D001075 9.0e-18 93.2 100 51.0
CiPaw.02G185400 Carya illinoinensis HOM05D001415 ORTHO05D001075 2.6e-17 91.7 89 53.9
Gohir.A13G018500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.4e-17 91.3 92 53.3
Cfa001452 Carpinus fangiana HOM05D001415 ORTHO05D001075 1.7e-16 89.0 86 51.2
Haze_17089 Corylus avellana HOM05D001415 ORTHO05D001075 1.7e-16 89.0 86 51.2
Thecc.10G036800 Theobroma cacao HOM05D001415 ORTHO05D001075 4.9e-16 87.4 91 51.6
Cc02_g07600 Coffea canephora HOM05D001415 ORTHO05D001075 1.9e-15 85.5 90 48.9
Manes.07G117800 Manihot esculenta HOM05D001415 ORTHO05D001075 1.9e-15 85.5 86 52.3
Potri.010G201700 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.4e-15 85.1 82 52.4
CANSAT56G0089 Cannabis sativa HOM05D001415 ORTHO05D001075 3.2e-15 84.7 91 50.5
CiPaw.01G289500 Carya illinoinensis HOM05D001415 ORTHO05D001075 3.2e-15 84.7 89 49.4
ECA238G4842 Erigeron canadensis HOM05D001415 ORTHO05D001075 9.3e-15 83.2 90 51.1
Medtr5g080260 Medicago truncatula HOM05D001415 ORTHO05D001075 1.6e-14 82.4 91 49.5
Atru.chr12.418 Acer truncatum HOM05D001415 ORTHO05D001075 3.5e-14 81.3 95 46.3
Potri.008G057800 Populus trichocarpa HOM05D001415 ORTHO05D001075 3.5e-14 81.3 82 51.2
Actinidia02936 Actinidia chinensis HOM05D001415 ORTHO05D001075 4.6e-14 80.9 82 52.4
Ciclev10033183m.g Citrus clementina HOM05D001415 ORTHO05D001075 6.0e-14 80.5 96 45.8
FAN10G0897 Fragaria x ananassa HOM05D001415 ORTHO05D001075 6.0e-14 80.5 77 51.9
RcHm_v2.0_Chr1g0367921 Rosa chinensis HOM05D001415 ORTHO05D001075 6.0e-14 80.5 78 50.0
Phvul.008G191701 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 7.9e-14 80.1 89 49.4
QL08p060355 Quercus lobata HOM05D001415 ORTHO05D001075 1.0e-13 79.7 105 41.0
Duzib128G0356 Durio zibethinus HOM05D001415 ORTHO05D001075 1.8e-13 79.0 96 45.8
Eucgr.J01236 Eucalyptus grandis HOM05D001415 ORTHO05D001075 1.8e-13 79.0 89 44.9
Glyma.02G248900 Glycine max HOM05D001415 ORTHO05D001075 1.8e-13 79.0 93 48.4
Glyma.14G067500 Glycine max HOM05D001415 ORTHO05D001075 1.8e-13 79.0 90 48.9
Lalb_Chr15g0084661 Lupinus albus HOM05D001415 ORTHO05D001075 1.8e-13 79.0 91 45.1
Manes.10G028700 Manihot esculenta HOM05D001415 ORTHO05D001075 1.8e-13 79.0 86 48.8
TPR.G3500 Trifolium pratense HOM05D001415 ORTHO05D001075 1.8e-13 79.0 74 52.7
Hma1.2p1_0998F.1_g246100 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 2.3e-13 78.6 84 48.8
Ca_05883_v3 Cicer arietinum L. HOM05D001415 ORTHO05D001075 3.9e-13 77.8 75 50.7
Nn2g11165 Nelumbo nucifera HOM05D001415 ORTHO05D001075 3.9e-13 77.8 82 50.0
LjContig00141g0017499 Lotus japonicus HOM05D001415 ORTHO05D001075 5.1e-13 77.4 89 44.9
FAN03G1064 Fragaria x ananassa HOM05D001415 ORTHO05D001075 6.7e-13 77.0 77 51.9
Hma1.2p1_1480F.1_g286050 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 6.7e-13 77.0 87 50.6
Sc10g0001700 Simmondsia chinensis HOM05D001415 ORTHO05D001075 6.7e-13 77.0 80 47.5
Nn2g13402 Nelumbo nucifera HOM05D001415 ORTHO05D001075 8.7e-13 76.6 75 52.0
MELO3C023874.2 Cucumis melo HOM05D001415 ORTHO05D001075 1.1e-12 76.3 73 52.1
Lalb_Chr17g0346301 Lupinus albus HOM05D001415 ORTHO05D001075 1.1e-12 76.3 97 43.3
MBI14_g04657_MAGBIO Magnolia biondii HOM05D001415 ORTHO05D001075 1.1e-12 76.3 75 52.0
ClCG07G003480 Citrullus lanatus HOM05D001415 ORTHO05D001075 1.5e-12 75.9 73 52.1
Gohir.D13G019500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 1.5e-12 75.9 92 46.7
Aqoxy2G02269 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 1.9e-12 75.5 74 52.7
Duzib114G0513 Durio zibethinus HOM05D001415 ORTHO05D001075 1.9e-12 75.5 87 47.1
MD07G1201200 Malus domestica HOM05D001415 ORTHO05D001075 1.9e-12 75.5 71 53.5
SalBow6G6345 Salvia bowleyana HOM05D001415 ORTHO05D001075 1.9e-12 75.5 80 48.8
Lalb_Chr18g0053201 Lupinus albus HOM05D001415 ORTHO05D001075 2.5e-12 75.1 73 49.3
Rhsim03G0133500 Rhododendron simsii HOM05D001415 ORTHO05D001075 2.5e-12 75.1 74 50.0
HanXRQChr07g0201511 Helianthus annuus HOM05D001415 ORTHO05D001075 5.6e-12 73.9 91 44.0
Lsat_1_v5_gn_2_118460 Lactuca sativa HOM05D001415 ORTHO05D001075 5.6e-12 73.9 91 45.1
CSS0013409 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 7.4e-12 73.6 77 49.4
THA.LOC104810035 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 9.6e-12 73.2 91 42.9
TPR.G15833 Trifolium pratense HOM05D001415 ORTHO05D001075 9.6e-12 73.2 92 44.6
HanXRQChr10g0312871 Helianthus annuus HOM05D001415 ORTHO05D001075 1.3e-11 72.8 70 55.7
Medtr3g067980 Medicago truncatula HOM05D001415 ORTHO05D001075 2.1e-11 72.0 86 44.2
Gorai.013G021600 Gossypium raimondii HOM05D001415 ORTHO05D001075 3.7e-11 71.2 45 71.1
Sabra08G0042400 Salix brachista HOM05D001415 ORTHO05D001075 3.7e-11 71.2 76 48.7
Gohir.A05G348600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.2e-11 70.5 91 44.0
Gohir.D04G063900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.2e-11 70.5 91 44.0
Gorai.012G071500 Gossypium raimondii HOM05D001415 ORTHO05D001075 6.2e-11 70.5 91 44.0
BcaC02g12100 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-11 70.1 97 41.2
A05p06700 Brassica napus HOM05D001415 ORTHO05D001075 8.1e-11 70.1 97 41.2
C04p07830 Brassica napus HOM05D001415 ORTHO05D001075 8.1e-11 70.1 97 41.2
BolC4t22402H Brassica oleracea HOM05D001415 ORTHO05D001075 8.1e-11 70.1 97 41.2
BraA05t19637Z Brassica rapa HOM05D001415 ORTHO05D001075 8.1e-11 70.1 97 41.2
Dinv26032 Davidia involucrata HOM05D000371 ORTHO05D008019 1.1e-10 69.7 73 47.9
MD01G1136300 Malus domestica HOM05D001415 ORTHO05D001075 1.1e-10 69.7 41 73.2
THA.LOC109117081 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 1.1e-10 69.7 87 43.7
Migut.F01456 Erythranthe guttata HOM05D001415 ORTHO05D001075 1.4e-10 69.3 78 46.2
Sp4g21960 Schrenkiella parvula HOM05D001415 ORTHO05D001075 1.4e-10 69.3 98 40.8
Sed0003934 Sechium edule HOM05D001415 ORTHO05D001075 1.4e-10 69.3 45 68.9
BcaB02g09096 Brassica carinata HOM05D001415 ORTHO05D001075 2.4e-10 68.6 101 42.6
Sed0019804 Sechium edule HOM05D001415 ORTHO05D001075 2.4e-10 68.6 93 44.1
Lalb_Chr04g0251121 Lupinus albus HOM05D001415 ORTHO05D001075 3.1e-10 68.2 83 41.0
Lalb_Chr10g0104651 Lupinus albus HOM05D001415 ORTHO05D001075 3.1e-10 68.2 88 42.0
Prupe.2G237800 Prunus persica HOM05D001415 ORTHO05D001075 4.0e-10 67.8 40 75.0
Lsat_1_v5_gn_9_64901 Lactuca sativa HOM05D001415 ORTHO05D001075 5.3e-10 67.4 85 45.9
Oeu012944.2 Olea europaea HOM05D001415 ORTHO05D001075 5.3e-10 67.4 66 50.0
HanXRQChr09g0250171 Helianthus annuus HOM05D001415 ORTHO05D001075 1.2e-09 66.2 88 47.7
MBI05_g29691_MAGBIO Magnolia biondii HOM05D001415 ORTHO05D001075 1.2e-09 66.2 99 41.4
CARHR134540 Cardamine hirsuta HOM05D001415 ORTHO05D001075 1.5e-09 65.9 90 43.3
Thhalv10017695m.g Eutrema salsugineum HOM05D001415 ORTHO05D001075 1.5e-09 65.9 97 39.2
CAN.G1366.20 Capsicum annuum HOM05D001415 ORTHO05D001075 2.0e-09 65.5 49 61.2
SalBow1G2982 Salvia bowleyana HOM05D000007 ORTHO05D000521 2.0e-09 65.5 48 62.5
DCAR_027603 Daucus carota HOM05D001415 ORTHO05D001075 2.6e-09 65.1 98 42.9
Phvul.001G233300 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 2.6e-09 65.1 89 42.7
PGSC0003DMG400006357 Solanum tuberosum HOM05D001415 ORTHO05D001075 5.8e-09 63.9 65 49.2
AL4G37150 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 1.0e-08 63.2 86 45.3
AT2G39705 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 1.0e-08 63.2 86 45.3
Glyma.11G220000 Glycine max HOM05D001415 ORTHO05D001075 1.3e-08 62.8 40 67.5
BcaB06g29109 Brassica carinata HOM05D001415 ORTHO05D001075 2.2e-08 62.0 94 38.3
A04p30340 Brassica napus HOM05D001415 ORTHO05D001075 2.2e-08 62.0 94 40.4
BolC4t28246H Brassica oleracea HOM05D001415 ORTHO05D001075 2.2e-08 62.0 94 40.4
BraA04t18474Z Brassica rapa HOM05D001415 ORTHO05D001075 2.2e-08 62.0 94 40.4
Carub.0004s2175 Capsella rubella HOM05D001415 ORTHO05D001075 2.2e-08 62.0 86 44.2
Glyma.18G037400 Glycine max HOM05D001415 ORTHO05D001075 3.8e-08 61.2 98 39.8
Gohir.A10G220900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.9e-08 60.8 43 62.8
Gohir.D10G233100 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.9e-08 60.8 43 62.8
Gorai.011G266700 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.9e-08 60.8 43 62.8
BcaC02g07426 Brassica carinata HOM05D001415 ORTHO05D001075 6.5e-08 60.5 94 40.4
C04p67490 Brassica napus HOM05D001415 ORTHO05D001075 6.5e-08 60.5 94 40.4
PSO274G0001 Papaver somniferum HOM05D001415 ORTHO05D001075 7.1e-07 57.0 48 58.3
PSO513G0025 Papaver somniferum HOM05D001415 ORTHO05D001075 7.1e-07 57.0 48 58.3
Glyma.10G208500 Glycine max HOM05D001415 ORTHO05D001075 9.3e-07 56.6 45 53.3
Sed0022297 Sechium edule HOM05D001415 ORTHO05D001075 1.6e-06 55.8 48 52.1
A08p01440 Brassica napus HOM05D001415 ORTHO05D001075 2.1e-06 55.5 45 57.8
Manes.07G133164 Manihot esculenta HOM05D001415 ORTHO05D001075 2.7e-06 55.1 45 53.3
Aa31LG8G1630 Aethionema arabicum HOM05D000146 ORTHO05D007947 3.5e-06 54.7 45 57.8
ClCG04G009250 Citrullus lanatus HOM05D001415 ORTHO05D001075 3.5e-06 54.7 41 58.5
COL.COLO4_17147 Corchorus olitorius HOM05D001415 ORTHO05D001075 3.5e-06 54.7 54 50.0
Dinv37809 Davidia involucrata HOM05D001415 ORTHO05D001075 3.5e-06 54.7 35 71.4
Potri.008G035900 Populus trichocarpa HOM05D001415 ORTHO05D001075 3.5e-06 54.7 33 69.7
arahy.Tifrunner.gnm1.ann1.S2C0P1 Arachis hypogaea HOM05D001415 ORTHO05D001075 4.6e-06 54.3 53 56.6
Lj5g0008582 Lotus japonicus HOM05D001415 ORTHO05D001075 4.6e-06 54.3 40 55.0
PSO135G0377 Papaver somniferum HOM05D001415 ORTHO05D001075 4.6e-06 54.3 37 64.9
THA.LOC104810403 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 4.6e-06 54.3 45 57.8
MD04G1094700 Malus domestica HOM05D001415 ORTHO05D001075 6.0e-06 53.9 45 51.1
Thecc.06G132000 Theobroma cacao HOM05D001415 ORTHO05D001075 6.0e-06 53.9 56 51.8
AL3G26700 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
AT3G14362 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
A03p38770 Brassica napus HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
A05p35030 Brassica napus HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
C05p52990 Brassica napus HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
BolC3t16958H Brassica oleracea HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
BolC5t33977H Brassica oleracea HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
BraA03t13025Z Brassica rapa HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
BraA05t22317Z Brassica rapa HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
Carub.0003s1407 Capsella rubella HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6
PGR119G2183 Punica granatum HOM05D001415 ORTHO05D001075 7.9e-06 53.5 53 49.1
THA.LOC104822609 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 7.9e-06 53.5 45 55.6


User provided reference genes

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