Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 4.9e-224 780.8 390 100.0
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 3.0e-181 638.6 432 78.2
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 7.2e-175 617.5 432 76.4
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 3.1e-141 505.8 452 60.6
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 1.5e-140 503.4 452 60.0
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 1.5e-140 503.4 465 59.4
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.5e-140 503.4 453 60.5
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 6.4e-139 498.0 452 60.2
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 6.4e-139 498.0 452 59.7
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.9e-138 496.5 448 60.5
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 5.4e-138 495.0 452 59.5
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 7.1e-138 494.6 452 60.0
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 7.1e-138 494.6 452 60.0
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 1.6e-137 493.4 441 60.8
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 2.7e-137 492.7 465 59.1
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 4.6e-137 491.9 452 59.7
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 6.0e-137 491.5 452 58.4
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 6.0e-137 491.5 451 59.4
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 1.7e-136 490.0 452 59.1
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 6.6e-136 488.0 465 58.3
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 6.6e-136 488.0 465 58.3
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.5e-135 486.1 466 57.5
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 9.5e-135 484.2 445 59.3
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.2e-134 483.8 465 58.1
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 1.6e-134 483.4 466 57.5
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.6e-134 483.4 448 57.8
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 1.6e-134 483.4 454 58.6
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 4.7e-134 481.9 451 58.3
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 6.2e-134 481.5 450 59.6
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 1.1e-133 480.7 466 56.7
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 4.0e-133 478.8 461 56.8
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.2e-132 477.2 451 57.9
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 2.6e-132 476.1 464 57.5
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 2.6e-132 476.1 452 58.6
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 5.8e-132 474.9 451 56.5
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 7.6e-132 474.6 455 58.2
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.3e-131 473.8 453 58.3
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 1.7e-131 473.4 443 59.4
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 1.7e-131 473.4 453 58.3
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.7e-131 472.2 359 71.0
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 4.9e-131 471.9 451 57.4
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 8.4e-131 471.1 445 57.8
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 8.4e-131 471.1 445 57.3
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 8.4e-131 471.1 503 53.1
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.4e-130 470.3 447 55.9
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 1.9e-130 469.9 445 57.8
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.4e-130 469.5 445 57.5
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 2.4e-130 469.5 452 57.1
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 3.2e-130 469.2 445 56.9
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.2e-130 469.2 445 57.5
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 5.4e-130 468.4 464 55.8
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 7.1e-130 468.0 466 56.0
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 9.2e-130 467.6 444 56.3
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 2.7e-129 466.1 448 58.3
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 4.6e-129 465.3 446 57.2
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 1.0e-128 464.2 452 56.2
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.7e-128 463.4 460 54.6
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 3.0e-128 462.6 465 55.9
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.0e-128 462.6 447 55.9
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 3.9e-128 462.2 435 57.9
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 3.9e-128 462.2 446 57.0
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 3.9e-128 462.2 445 57.3
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 5.1e-128 461.8 463 56.2
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 6.6e-128 461.5 467 56.3
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 1.5e-127 460.3 465 55.5
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 1.9e-127 459.9 452 57.3
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 3.3e-127 459.1 447 55.3
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 4.3e-127 458.8 446 56.3
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.2e-126 457.2 445 56.9
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.2e-126 457.2 460 54.1
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 1.6e-126 456.8 453 55.8
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.6e-126 456.8 452 56.9
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 2.1e-126 456.4 449 57.2
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.6e-126 455.7 462 55.8
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 4.7e-126 455.3 442 57.2
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 6.2e-126 454.9 449 57.7
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 8.1e-126 454.5 452 55.8
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 5.2e-125 451.8 449 55.5
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 6.8e-125 451.4 452 55.8
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 6.8e-125 451.4 442 57.2
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 8.9e-125 451.1 447 53.7
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.2e-124 450.7 470 53.0
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.5e-124 450.3 447 54.8
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 3.4e-124 449.1 495 52.3
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 3.4e-124 449.1 449 57.0
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 3.4e-124 449.1 465 55.3
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 4.4e-124 448.7 449 55.2
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 3.8e-123 445.7 452 54.9
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 2.4e-122 443.0 463 53.8
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 1.6e-121 440.3 452 54.2
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 6.6e-120 434.9 475 51.4
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 8.1e-118 427.9 439 54.0
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 4.0e-117 425.6 448 53.1
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.1e-114 417.5 460 50.2
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 3.2e-114 416.0 402 58.2
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 9.3e-114 414.5 429 53.1
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 9.3e-114 414.5 473 50.1
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 1.6e-113 413.7 433 52.2
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 6.0e-113 411.8 429 52.7
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 6.6e-112 408.3 449 51.7
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 4.8e-110 402.1 422 53.6
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 8.1e-110 401.4 443 52.8
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 2.1e-105 386.7 448 50.2
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 1.9e-103 380.2 419 52.0
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 7.4e-103 378.3 455 48.4
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 1.8e-101 373.6 451 49.2
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.0e-99 367.9 369 55.3
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 4.9e-99 365.5 359 56.8
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 8.2e-94 348.2 354 56.2
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 5.3e-93 345.5 449 47.7
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 6.9e-93 345.1 376 52.1
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 8.7e-88 328.2 401 47.4
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 2.6e-71 273.5 460 38.5
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 7.4e-71 271.9 472 36.7
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 2.4e-69 266.9 435 37.0
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 4.7e-65 252.7 451 34.8
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 2.4e-61 240.4 288 49.3
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 4.2e-50 203.0 139 71.2
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 1.9e-42 177.6 240 46.7
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 2.0e-36 157.5 123 61.8
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 2.5e-34 150.6 138 61.6
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 2.2e-30 137.5 259 37.1
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.5e-23 114.8 75 81.3
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 7.1e-21 105.9 79 68.4
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 2.1e-20 104.4 102 59.8
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 8.6e-19 99.0 143 34.3
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 8.1e-17 92.4 69 63.8
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 1.1e-16 92.0 62 69.4
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 2.3e-16 90.9 365 28.5
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 9.9e-15 85.5 66 62.1
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 3.1e-08 63.9 46 67.4
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 9.9e-07 58.9 100 42.0


User provided reference genes

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