Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 0.0e+00 1522.7 809 100.0
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 3.0e-260 902.1 905 58.2
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 6.3e-258 894.4 847 59.7
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.2e-248 863.6 830 57.6
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 5.9e-248 861.3 790 59.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.0e-247 860.5 836 59.2
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.7e-247 859.8 840 56.8
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 4.0e-244 848.6 808 58.0
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 3.7e-242 842.0 793 58.9
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.4e-241 839.3 853 56.7
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.2e-240 837.0 849 56.7
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.7e-240 835.9 858 55.6
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 5.0e-239 831.6 908 54.2
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.2e-237 827.0 849 57.1
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.8e-237 825.9 818 56.8
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.8e-236 823.2 835 56.9
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 1.6e-232 810.1 894 52.7
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 2.3e-231 806.2 912 51.8
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.1e-230 803.9 865 52.8
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 1.1e-230 803.9 893 52.9
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.1e-230 803.9 840 55.7
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.5e-230 803.5 774 57.9
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 5.6e-230 801.6 890 53.7
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 5.6e-230 801.6 840 55.6
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 9.5e-230 800.8 889 51.5
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.6e-229 798.9 909 50.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.4e-228 797.0 872 52.2
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 5.2e-228 795.0 861 53.8
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 1.5e-227 793.5 847 54.9
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.6e-227 792.7 795 56.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-226 789.3 795 56.7
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 3.8e-226 788.9 868 52.8
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 3.8e-226 788.9 896 52.5
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 8.4e-226 787.7 922 51.4
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.4e-225 786.2 789 56.5
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 2.4e-225 786.2 790 56.1
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 9.2e-225 784.3 928 50.2
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.2e-224 783.9 881 53.2
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.2e-224 783.9 884 52.1
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 6.0e-224 781.6 860 52.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 6.0e-224 781.6 875 50.6
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.0e-223 780.8 871 52.0
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 3.9e-223 778.9 882 53.1
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.1e-222 777.3 877 50.2
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.5e-222 776.2 917 50.9
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 1.6e-221 773.5 869 50.4
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 1.6e-221 773.5 763 56.6
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 3.6e-221 772.3 807 54.3
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.1e-220 770.8 893 52.2
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.2e-219 767.3 870 52.0
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 7.6e-219 764.6 885 52.9
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.7e-218 763.5 842 53.4
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.9e-218 762.7 818 52.7
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 6.4e-218 761.5 868 50.8
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.9e-217 760.0 882 52.4
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 2.4e-217 759.6 776 53.4
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 7.1e-217 758.1 889 51.0
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.7e-216 756.1 811 52.7
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 3.5e-216 755.7 881 49.8
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 2.3e-215 753.1 911 50.7
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 3.9e-215 752.3 792 54.0
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 6.6e-215 751.5 798 53.3
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 8.7e-215 751.1 800 53.8
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 1.9e-214 750.0 872 50.3
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 1.9e-214 750.0 792 54.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.4e-212 743.8 855 52.4
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 3.1e-212 742.7 785 54.5
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.2e-211 740.7 788 54.3
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.5e-211 740.3 776 52.7
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.7e-210 736.9 888 50.7
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 6.4e-210 734.9 794 53.1
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.1e-209 734.2 773 53.0
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.9e-209 733.4 808 51.7
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.9e-209 733.4 791 53.0
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 4.6e-208 728.8 827 51.5
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 3.3e-206 722.6 751 53.1
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 3.7e-205 719.2 849 51.8
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 4.8e-205 718.8 825 51.5
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 4.8e-205 718.8 840 51.8
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 2.6e-203 713.0 789 51.3
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 3.8e-202 709.1 919 46.6
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 5.3e-196 688.7 775 49.8
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 6.9e-196 688.3 762 53.4
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 6.0e-192 675.2 791 50.6
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.8e-188 663.7 865 48.6
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 6.5e-178 628.6 775 46.6
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 5.7e-174 615.5 651 54.4
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 3.8e-170 602.8 766 49.1
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 1.0e-167 594.7 683 51.7
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.6e-166 590.1 808 45.3
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 2.0e-163 580.5 848 42.3
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.2e-162 577.0 696 49.0
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 8.5e-162 575.1 697 50.1
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.7e-152 543.5 446 62.3
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 9.1e-148 528.5 475 57.7
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 7.7e-147 525.4 408 63.2
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.1e-137 495.0 838 43.1
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.5e-137 494.6 578 49.3
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.5e-134 484.6 547 54.3
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 5.8e-118 429.5 403 56.8
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 5.6e-113 412.9 502 50.6
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 8.1e-104 382.5 751 36.9
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.3e-85 322.0 611 35.4
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 4.9e-85 320.1 222 70.3
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 2.4e-79 301.2 592 34.1
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.0e-77 295.8 518 42.3
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 3.5e-75 287.3 337 53.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.6e-72 278.5 784 30.5
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 9.0e-71 272.7 1002 28.7
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 2.0e-62 245.0 220 63.6
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 2.3e-58 231.5 284 47.2
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.0e-53 216.1 144 73.6
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 6.1e-35 153.7 190 46.8
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.2e-34 150.6 157 56.7
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 2.2e-32 145.2 249 41.8
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.7e-21 109.0 63 76.2
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 5.2e-18 97.4 152 46.7
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 1.7e-16 92.4 94 55.3
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 4.9e-16 90.9 133 42.1
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 1.2e-11 76.3 79 53.2
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 1.2e-11 76.3 79 53.2
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.2e-11 76.3 77 57.1
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 1.4e-10 72.8 170 35.3
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.5e-09 69.3 116 46.6
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 1.3e-08 66.2 246 23.2


User provided reference genes

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