Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 5.0e-196 687.6 346 100.0
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 5.8e-176 620.9 339 92.3
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 4.7e-170 601.3 343 88.0
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.4e-169 599.7 333 89.2
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.8e-169 599.4 334 89.2
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 3.1e-169 598.6 333 89.5
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-168 596.7 334 88.0
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-168 596.7 334 88.6
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 1.5e-168 596.3 339 88.2
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 2.0e-168 595.9 339 87.9
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.6e-168 595.5 339 88.2
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 4.4e-168 594.7 341 87.4
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 4.4e-168 594.7 342 86.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.8e-168 594.3 339 87.6
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.8e-168 594.3 339 87.6
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.8e-168 594.3 339 87.6
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 5.8e-168 594.3 339 87.6
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 7.6e-168 594.0 339 87.0
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 7.6e-168 594.0 339 87.0
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 1.3e-167 593.2 338 87.3
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 3.8e-167 591.7 339 87.3
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 3.8e-167 591.7 337 86.9
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 6.4e-167 590.9 334 87.4
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 6.4e-167 590.9 339 87.0
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 8.4e-167 590.5 337 87.8
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 1.1e-166 590.1 339 86.4
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 1.9e-166 589.3 339 87.0
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 2.4e-166 589.0 339 85.5
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 3.2e-166 588.6 339 85.8
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 3.2e-166 588.6 330 88.8
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 4.2e-166 588.2 339 86.4
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 4.2e-166 588.2 337 87.2
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 5.4e-166 587.8 339 85.8
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 7.1e-166 587.4 339 85.8
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 9.3e-166 587.0 340 86.5
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 9.3e-166 587.0 339 85.3
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.2e-165 586.6 337 88.4
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 86.4
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 85.5
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 86.1
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 86.1
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 1.6e-165 586.3 340 86.5
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.6e-165 586.3 339 87.6
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 2.7e-165 585.5 339 85.5
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 2.7e-165 585.5 339 85.8
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 2.7e-165 585.5 339 85.5
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.5e-165 585.1 331 88.8
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 4.6e-165 584.7 342 86.0
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 4.6e-165 584.7 339 85.5
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 7.8e-165 583.9 341 85.6
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 1.0e-164 583.6 342 86.0
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 1.0e-164 583.6 342 85.7
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 1.0e-164 583.6 339 86.1
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 1.7e-164 582.8 338 85.5
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 2.3e-164 582.4 330 88.5
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 2.3e-164 582.4 334 86.8
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 3.0e-164 582.0 342 85.7
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 3.0e-164 582.0 339 85.3
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 3.9e-164 581.6 340 85.6
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.9e-164 581.6 339 85.5
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 3.9e-164 581.6 338 85.8
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 3.9e-164 581.6 339 85.0
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.1e-164 581.3 339 85.8
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 5.1e-164 581.3 339 85.5
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 5.1e-164 581.3 339 84.4
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 6.6e-164 580.9 333 86.5
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.1e-163 580.1 339 84.1
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.5e-163 578.9 339 85.5
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 3.3e-163 578.6 339 84.1
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 4.3e-163 578.2 339 83.8
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 4.3e-163 578.2 339 85.5
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 5.6e-163 577.8 339 85.3
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 7.3e-163 577.4 339 84.4
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 1.3e-162 576.6 338 86.1
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.6e-162 576.2 334 85.3
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 2.1e-162 575.9 342 84.8
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 3.6e-162 575.1 339 84.1
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 8.1e-162 573.9 318 90.3
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 3.1e-161 572.0 328 86.3
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 5.3e-161 571.2 339 83.8
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 9.0e-161 570.5 339 83.2
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.2e-160 570.1 345 81.7
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 1.2e-160 570.1 364 79.7
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.5e-160 569.7 328 86.0
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.7e-159 566.2 331 85.2
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.2e-159 565.8 327 85.0
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 2.2e-159 565.8 341 82.4
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 4.9e-159 564.7 376 77.1
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 6.4e-159 564.3 339 82.9
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 1.1e-158 563.5 339 82.9
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 1.4e-158 563.1 345 80.6
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 1.9e-158 562.8 330 84.5
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 3.2e-158 562.0 332 84.0
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 5.4e-158 561.2 339 82.3
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 7.1e-158 560.8 339 82.0
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 7.1e-158 560.8 329 83.6
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 1.6e-157 559.7 339 82.9
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 1.8e-156 556.2 339 82.0
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 2.5e-155 552.4 339 78.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.3e-155 551.6 315 86.7
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 5.6e-155 551.2 339 79.6
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 1.6e-154 549.7 340 77.4
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 5.3e-153 544.7 362 77.1
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 6.9e-153 544.3 328 81.7
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 1.3e-151 540.0 372 75.0
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 5.5e-150 534.6 339 77.3
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 7.9e-149 530.8 339 77.9
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.0e-148 530.4 340 77.4
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.1e-147 526.9 394 70.8
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 5.3e-145 518.1 339 76.1
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 6.9e-145 517.7 338 74.9
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 2.5e-142 509.2 312 80.8
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 6.0e-141 504.6 343 74.1
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 2.3e-140 502.7 339 76.1
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 2.8e-138 495.7 334 74.0
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.5e-134 482.6 326 73.6
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 9.7e-131 470.7 312 73.7
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 6.7e-124 448.0 319 69.0
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 1.3e-122 443.7 333 69.4
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 6.1e-117 424.9 248 83.9
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 3.0e-116 422.5 339 67.3
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 2.2e-114 416.4 252 81.0
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 2.8e-114 416.0 239 84.9
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.2e-110 402.1 249 80.7
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 2.0e-107 393.3 245 80.8
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 5.9e-104 381.7 327 63.3
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 7.7e-104 381.3 219 86.3
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 1.3e-103 380.6 233 80.3
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 2.5e-102 376.3 220 85.5
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 1.4e-100 370.5 208 87.5
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 9.1e-97 357.8 194 90.7
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 1.1e-94 350.9 310 58.7
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.0e-91 340.1 188 88.8
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 1.7e-87 327.0 193 81.9
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 1.1e-86 324.3 332 53.6
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 1.3e-82 310.8 242 66.9
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.4e-76 290.8 171 85.4
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 5.8e-75 285.4 195 69.2
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 5.6e-62 242.3 145 83.4
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 7.3e-62 241.9 135 89.6
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.2e-53 214.5 151 69.5
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 1.5e-51 207.6 155 65.8
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 3.2e-41 173.3 148 64.9
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.0e-35 154.1 87 87.4
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.5e-35 152.9 102 75.5
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 1.1e-33 148.3 96 76.0
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 6.7e-31 139.0 101 74.3
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.6e-29 134.4 74 87.8
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 3.1e-28 130.2 78 78.2
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.2e-27 128.3 104 61.5
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 1.5e-27 127.9 87 73.6
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 9.3e-25 118.6 86 69.8
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 3.9e-23 113.2 127 54.3
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.5e-19 99.8 108 52.8
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.9e-19 99.4 77 67.5
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 1.3e-18 98.2 124 52.4
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 6.5e-18 95.9 293 29.0
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 7.2e-17 92.4 319 25.7
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 9.4e-17 92.0 231 29.9
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.4e-15 88.2 281 29.2
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 1.1e-14 85.1 74 59.5
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 3.7e-13 80.1 267 28.1
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.0e-10 72.0 103 45.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.2e-10 70.9 53 67.9
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 4.2e-09 66.6 59 57.6
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 5.5e-09 66.2 196 28.6
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 7.2e-09 65.9 42 71.4


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