Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 3.4e-115 418.3 207 100.0
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.9e-57 226.5 190 54.7
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 4.2e-57 225.3 210 51.4
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.6e-56 223.4 217 52.5
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 3.6e-56 222.2 191 56.0
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 6.1e-56 221.5 219 52.1
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.0e-55 220.7 217 52.5
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.8e-55 219.9 217 52.1
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.2e-54 217.2 213 51.2
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.6e-54 216.1 156 62.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 5.7e-54 214.9 217 52.1
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 5.7e-54 214.9 179 55.9
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 5.7e-54 214.9 197 52.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.7e-53 213.4 191 51.3
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 2.8e-53 212.6 199 50.3
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 2.8e-53 212.6 199 50.3
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 2.8e-53 212.6 157 59.2
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 3.7e-53 212.2 192 50.5
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 4.8e-53 211.8 157 59.2
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 6.3e-53 211.5 165 59.4
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 6.3e-53 211.5 163 58.9
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.3e-53 211.5 163 58.9
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 6.3e-53 211.5 217 50.7
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 8.3e-53 211.1 170 56.5
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.1e-52 210.7 190 53.7
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.1e-52 210.7 163 58.9
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.4e-52 210.3 174 54.6
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.8e-52 209.9 217 49.8
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.8e-52 209.9 163 58.9
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 3.1e-52 209.1 191 50.3
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.1e-52 208.8 219 51.1
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 7.0e-52 208.0 218 51.4
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 7.0e-52 208.0 157 59.2
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 7.0e-52 208.0 156 62.2
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 7.0e-52 208.0 205 50.7
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 9.1e-52 207.6 157 56.1
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 9.1e-52 207.6 155 58.1
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.2e-51 207.2 204 51.0
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.6e-51 206.8 165 56.4
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.6e-51 206.8 194 51.5
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.6e-51 206.8 195 50.8
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 2.0e-51 206.5 218 50.9
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.0e-51 206.5 157 58.6
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 2.7e-51 206.1 165 57.0
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 2.7e-51 206.1 211 50.2
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.7e-51 206.1 164 58.5
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 3.5e-51 205.7 158 58.9
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 4.5e-51 205.3 206 49.5
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 5.9e-51 204.9 157 59.2
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.9e-51 204.9 190 51.6
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 7.7e-51 204.5 156 60.3
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.3e-50 203.8 218 50.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 1.3e-50 203.8 217 49.8
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.3e-50 203.8 222 49.1
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.7e-50 203.4 157 57.3
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 2.9e-50 202.6 218 49.1
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 3.8e-50 202.2 157 58.0
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 3.8e-50 202.2 217 49.8
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 5.0e-50 201.8 203 50.7
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.0e-50 201.8 219 50.2
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 8.6e-50 201.1 194 47.9
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.1e-49 200.7 190 50.0
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 1.5e-49 200.3 156 58.3
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.9e-49 199.9 163 55.2
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.3e-49 199.1 156 56.4
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 3.3e-49 199.1 157 56.7
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 3.3e-49 199.1 185 51.9
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.3e-49 199.1 207 50.2
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 7.2e-49 198.0 213 47.9
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 9.5e-49 197.6 157 56.1
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 3.6e-48 195.7 148 59.5
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.7e-48 195.3 218 48.2
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 6.1e-48 194.9 213 49.3
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.0e-47 194.1 148 58.8
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 1.0e-47 194.1 162 55.6
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.8e-47 193.4 217 48.4
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 4.0e-47 192.2 147 59.2
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.2e-46 190.7 192 49.0
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.2e-46 190.7 192 49.0
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.2e-46 190.7 210 48.1
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.5e-46 190.3 189 50.3
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 3.4e-46 189.1 217 47.0
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 7.5e-46 188.0 217 47.0
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.2e-45 186.4 159 54.7
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 6.3e-45 184.9 211 47.9
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 9.2e-44 181.0 206 50.5
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 2.3e-42 176.4 148 56.1
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 5.0e-42 175.3 157 51.6
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 6.6e-42 174.9 211 44.5
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 3.3e-41 172.6 154 51.9
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.2e-40 170.6 145 54.5
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 8.0e-40 167.9 177 45.8
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.0e-39 166.0 134 56.7
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 6.4e-37 158.3 161 47.2
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.9e-33 146.7 135 48.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 6.2e-32 141.7 157 44.6
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 5.2e-31 138.7 161 46.0
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 1.1e-28 131.0 135 45.2
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 4.1e-28 129.0 120 50.8
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.3e-23 113.2 80 62.5
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.7e-21 107.1 122 39.3
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.1e-19 100.1 141 42.6
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.0e-18 97.8 113 41.6
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.6e-16 90.5 148 33.1
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 2.8e-16 89.7 52 73.1
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 5.4e-12 75.5 54 63.0
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 9.6e-09 64.7 44 63.6


User provided reference genes

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