Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 1.1e-62 243.4 148 100.0
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 2.5e-43 179.1 118 78.8
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 1.8e-41 172.9 118 75.4
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 5.2e-41 171.4 118 75.4
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.2e-40 170.2 117 76.1
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 3.4e-40 168.7 120 72.5
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 3.4e-40 168.7 118 74.6
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 9.8e-40 167.2 118 74.6
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 9.8e-40 167.2 118 72.9
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.3e-39 166.8 118 73.7
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.2e-39 166.0 118 72.0
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 4.9e-39 164.9 146 64.4
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 8.3e-39 164.1 116 73.3
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 1.4e-38 163.3 117 73.5
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 3.1e-38 162.2 114 73.7
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 5.4e-38 161.4 120 71.7
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 5.4e-38 161.4 118 69.5
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 5.4e-38 161.4 117 72.6
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 7.0e-38 161.0 119 73.1
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 9.2e-38 160.6 118 70.3
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.2e-37 160.2 146 63.7
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.2e-37 160.2 118 71.2
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.6e-37 159.8 118 68.6
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 4.5e-37 158.3 114 71.9
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.9e-37 157.9 117 71.8
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 7.8e-37 157.5 141 61.0
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.0e-36 157.1 118 67.8
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.7e-36 156.4 118 66.9
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.7e-36 156.4 115 71.3
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.7e-36 156.4 115 71.3
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 2.9e-36 155.6 118 69.5
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 6.6e-36 154.5 153 59.5
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 8.6e-36 154.1 118 69.5
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 8.6e-36 154.1 118 69.5
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 1.1e-35 153.7 120 69.2
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.1e-35 153.7 118 69.5
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 1.5e-35 153.3 120 69.2
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.5e-35 153.3 118 68.6
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.5e-35 153.3 118 68.6
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.9e-35 152.9 118 69.5
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.9e-35 152.9 118 68.6
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.9e-35 152.9 134 62.7
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 2.5e-35 152.5 140 60.7
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 3.3e-35 152.1 114 69.3
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 3.3e-35 152.1 108 73.1
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.6e-35 151.4 118 67.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 7.3e-35 151.0 127 67.7
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 7.3e-35 151.0 146 58.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 9.5e-35 150.6 118 65.3
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 9.5e-35 150.6 153 57.5
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 1.6e-34 149.8 140 60.0
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.6e-34 149.8 116 67.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 2.1e-34 149.4 135 66.7
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 2.8e-34 149.1 112 70.5
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 2.8e-34 149.1 112 70.5
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 2.8e-34 149.1 140 60.0
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 4.7e-34 148.3 119 67.2
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 6.1e-34 147.9 118 66.1
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 6.1e-34 147.9 128 63.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 8.0e-34 147.5 112 69.6
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 8.0e-34 147.5 119 65.5
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 1.4e-33 146.7 112 69.6
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 1.4e-33 146.7 112 69.6
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 1.4e-33 146.7 112 69.6
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 1.8e-33 146.4 112 68.8
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 2.3e-33 146.0 109 73.4
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 4.0e-33 145.2 119 65.5
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.2e-33 144.8 118 63.6
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 5.2e-33 144.8 109 69.7
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 6.8e-33 144.4 140 56.4
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 3.4e-32 142.1 109 68.8
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 3.4e-32 142.1 106 67.9
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 4.4e-32 141.7 109 69.7
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 5.8e-32 141.4 116 63.8
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 5.8e-32 141.4 139 59.0
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 9.8e-32 140.6 119 64.7
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.3e-31 140.2 110 68.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.7e-31 139.8 109 70.6
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 3.7e-31 138.7 120 62.5
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 3.7e-31 138.7 103 72.8
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 8.3e-31 137.5 94 73.4
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.1e-30 137.1 127 61.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.4e-30 136.0 107 67.3
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 2.4e-30 136.0 117 63.2
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 5.4e-30 134.8 107 66.4
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 7.0e-30 134.4 94 75.5
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.6e-29 133.3 113 62.8
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 2.7e-29 132.5 109 65.1
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.6e-29 131.7 106 69.8
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 4.6e-29 131.7 112 66.1
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 6.0e-29 131.3 90 77.8
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.7e-28 129.8 90 76.7
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 8.6e-28 127.5 106 67.0
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 1.2e-26 123.6 149 48.3
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.8e-26 122.5 94 67.0
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.8e-25 119.8 143 53.1
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.5e-24 116.7 75 77.3
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.5e-24 116.7 75 77.3
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 8.3e-23 110.9 104 57.7
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.3e-23 110.9 84 69.0
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 3.2e-22 109.0 112 55.4
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 4.1e-22 108.6 108 55.6
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.2e-21 107.1 82 68.3
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 2.7e-21 105.9 95 63.2
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 6.0e-21 104.8 70 72.9
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.3e-19 99.0 75 69.3
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 2.3e-17 92.8 67 67.2
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.5e-16 87.8 137 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 9.9e-16 87.4 98 45.9
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 2.9e-15 85.9 77 62.3
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.9e-14 83.2 128 41.4
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 8.1e-10 67.8 105 39.0
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 4.0e-09 65.5 39 82.1
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 4.2e-06 55.5 72 47.2


User provided reference genes

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