Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 1.9e-209 732.3 364 100.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 9.9e-110 401.0 283 65.7
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 8.4e-109 397.9 300 63.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.9e-108 396.7 300 62.0
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 4.6e-107 392.1 281 62.6
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.0e-106 391.0 287 62.7
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.1e-106 388.7 282 63.1
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 8.7e-106 387.9 285 63.9
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.9e-105 386.7 285 63.5
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.9e-105 386.7 285 62.5
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 3.3e-105 386.0 294 60.9
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 7.3e-105 384.8 286 61.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 9.6e-105 384.4 296 61.1
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.4e-103 380.6 283 60.1
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.4e-103 379.8 287 62.4
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 5.3e-103 378.6 283 60.4
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.2e-102 377.5 295 59.7
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-102 377.5 293 59.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 2.6e-102 376.3 282 59.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.8e-102 375.2 285 60.0
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 7.6e-102 374.8 280 58.9
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.1e-100 370.9 283 61.5
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.4e-100 370.5 296 58.1
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 2.4e-100 369.8 281 60.9
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.4e-100 368.6 283 59.4
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 9.3e-100 367.9 284 61.3
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.5e-99 365.9 289 59.2
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 3.9e-98 362.5 299 58.5
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 1.1e-97 360.9 287 57.5
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.5e-97 360.5 300 57.7
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.5e-97 360.5 300 57.7
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 1.5e-97 360.5 285 57.9
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 7.4e-97 358.2 281 59.1
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 9.6e-97 357.8 287 58.9
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 9.6e-97 357.8 301 56.5
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.3e-96 357.5 294 58.2
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.3e-96 357.5 285 57.5
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.3e-96 357.5 279 57.0
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 2.8e-96 356.3 292 57.9
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 4.0e-95 352.4 266 60.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 3.4e-94 349.4 272 58.1
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 2.2e-93 346.7 283 55.5
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 6.0e-91 338.6 275 56.7
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 6.7e-90 335.1 273 56.4
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 6.7e-90 335.1 285 56.5
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 7.4e-89 331.6 283 54.8
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 6.2e-88 328.6 240 64.2
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 6.2e-88 328.6 295 54.9
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.4e-87 327.4 277 57.8
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.5e-86 322.4 281 50.5
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 7.6e-86 321.6 234 62.8
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.9e-85 319.7 270 56.3
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.9e-85 319.7 282 52.1
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.9e-84 317.0 278 54.7
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.0e-82 311.2 233 60.5
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 3.0e-82 309.7 276 52.9
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 5.1e-82 308.9 258 57.4
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 3.1e-79 299.7 275 51.6
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.9e-77 293.1 316 48.1
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 3.9e-74 282.7 314 43.6
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 4.1e-71 272.7 245 51.8
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.3e-66 256.9 219 56.6
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 6.7e-66 255.4 224 55.4
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 1.0e-61 241.5 219 51.6
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 9.4e-60 235.0 275 39.6
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.2e-59 234.6 274 40.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 3.6e-59 233.0 273 38.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 4.7e-59 232.6 184 59.2
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 2.3e-58 230.3 284 43.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 2.2e-56 223.8 210 51.4
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.1e-55 221.5 222 52.3
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 4.5e-54 216.1 240 46.2
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.1e-52 211.5 364 34.6
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 5.5e-44 182.6 229 43.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 7.5e-33 145.6 134 53.0
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 3.2e-31 140.2 104 63.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 7.8e-30 135.6 110 54.5
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 4.7e-27 126.3 369 27.9
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 3.2e-23 113.6 69 68.1
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.4e-15 88.2 180 35.0
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.1e-14 84.3 64 57.8


User provided reference genes

Program Settings