Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.1e-81 305.8 176 100.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.2e-28 130.6 106 73.6
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-28 130.2 106 73.6
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 3.0e-27 125.9 106 67.9
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 5.1e-27 125.2 107 70.1
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.1e-26 124.0 106 72.6
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 3.3e-26 122.5 106 67.0
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 1.6e-25 120.2 106 67.0
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 2.1e-25 119.8 106 67.0
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 2.8e-25 119.4 106 67.0
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.8e-25 119.4 106 67.0
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.8e-25 119.4 106 67.0
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.8e-25 119.4 106 67.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 3.6e-25 119.0 107 66.4
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 4.7e-25 118.6 106 65.1
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 4.7e-25 118.6 106 71.7
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 6.2e-25 118.2 123 56.1
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 6.2e-25 118.2 106 64.2
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 8.1e-25 117.9 106 63.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 8.1e-25 117.9 106 67.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 1.4e-24 117.1 106 67.0
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 2.4e-24 116.3 107 60.7
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.4e-24 116.3 107 75.7
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 2.4e-24 116.3 106 66.0
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 3.1e-24 115.9 106 69.8
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 3.1e-24 115.9 106 63.2
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 3.1e-24 115.9 106 65.1
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 3.1e-24 115.9 106 66.0
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 3.1e-24 115.9 106 66.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 4.0e-24 115.5 106 64.2
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 9.0e-24 114.4 106 64.2
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 9.0e-24 114.4 104 62.5
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.2e-23 114.0 106 66.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-23 114.0 106 66.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-23 114.0 106 66.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.0e-23 113.2 106 63.2
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 2.6e-23 112.8 98 69.4
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 2.6e-23 112.8 108 75.0
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 3.4e-23 112.5 107 65.4
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 5.8e-23 111.7 108 66.7
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.8e-23 111.7 106 65.1
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 7.6e-23 111.3 108 63.9
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 9.9e-23 110.9 107 64.5
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.7e-22 110.2 106 64.2
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.7e-22 110.2 107 64.5
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.7e-22 110.2 109 63.3
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 2.2e-22 109.8 107 63.6
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 2.9e-22 109.4 106 65.1
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 2.9e-22 109.4 106 61.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.9e-22 109.4 106 61.3
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 3.8e-22 109.0 106 58.5
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 3.8e-22 109.0 106 64.2
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.9e-22 108.6 106 64.2
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.4e-22 108.2 106 62.3
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.4e-21 107.1 106 64.2
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.9e-21 106.7 106 59.4
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 2.4e-21 106.3 107 61.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 2.4e-21 106.3 107 61.7
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 2.4e-21 106.3 106 70.8
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 2.4e-21 106.3 107 68.2
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 2.4e-21 106.3 109 63.3
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 4.2e-21 105.5 106 63.2
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 5.4e-21 105.1 106 61.3
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 7.1e-21 104.8 107 62.6
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 9.3e-21 104.4 105 60.0
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 9.3e-21 104.4 107 66.4
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.2e-20 104.0 106 62.3
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 1.6e-20 103.6 106 68.9
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.0e-19 100.9 106 60.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 1.7e-19 100.1 116 56.9
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.7e-19 100.1 107 57.0
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 3.0e-19 99.4 107 59.8
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 3.9e-19 99.0 106 57.5
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 5.1e-19 98.6 104 56.7
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-18 97.4 107 57.9
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.1e-18 97.4 108 59.3
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.5e-18 97.1 107 57.9
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.9e-18 96.7 107 57.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 1.9e-18 96.7 107 57.9
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 3.3e-18 95.9 107 57.0
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 7.3e-18 94.7 107 57.0
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.6e-17 93.6 106 59.4
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 6.2e-17 91.7 106 54.7
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 8.1e-17 91.3 107 54.2
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.1e-16 90.9 99 57.6
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.4e-16 90.5 99 58.6
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 3.1e-16 89.4 85 64.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 4.0e-16 89.0 106 51.9
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 4.0e-16 89.0 106 52.8
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 4.0e-16 89.0 106 52.8
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 4.0e-16 89.0 103 52.4
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 6.9e-16 88.2 101 69.3
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 6.9e-16 88.2 98 57.1
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 6.9e-16 88.2 106 52.8
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-15 87.4 98 59.2
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 3.8e-14 82.4 58 77.6
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.2e-13 79.3 58 77.6
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 1.2e-12 77.4 113 57.5
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 6.0e-12 75.1 71 64.8
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 6.0e-12 75.1 58 70.7
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 7.9e-12 74.7 119 45.4
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.3e-11 73.2 112 42.0
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 6.7e-11 71.6 91 53.8
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 6.7e-11 71.6 72 54.2
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 2.5e-10 69.7 84 54.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 2.5e-10 69.7 72 59.7
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 4.3e-10 68.9 49 77.6
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 4.3e-10 68.9 49 77.6
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-09 67.4 49 75.5
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.6e-09 67.0 101 46.5
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-08 64.3 50 76.0
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-08 63.9 49 73.5
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.4e-08 63.9 49 71.4
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 1.4e-08 63.9 102 46.1
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.4e-08 63.2 49 75.5
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 3.1e-08 62.8 44 79.5
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 4.0e-08 62.4 96 53.1
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.2e-07 60.8 46 80.4
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-07 60.8 44 77.3
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 2.6e-07 59.7 111 40.5
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.4e-07 59.3 90 52.2
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 4.5e-07 58.9 44 75.0
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 6.4e-06 55.1 108 38.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 6.4e-06 55.1 67 58.2


User provided reference genes

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