Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0004650 Simmondsia chinensis HOM05D001312 ORTHO05D001832 1.9e-187 659.1 337 100.0
Sc12g0003890 Simmondsia chinensis HOM05D001312 ORTHO05D001832 8.4e-63 245.0 312 49.7
Hund07715 Selenicereus undatus HOM05D001312 ORTHO05D001832 1.0e-60 238.0 349 41.0
EL10Ac9g21057 Beta vulgaris HOM05D001312 ORTHO05D001832 1.8e-60 237.3 344 41.3
AUR62023958 Chenopodium quinoa HOM05D001312 ORTHO05D001832 5.5e-54 215.7 342 39.8
AUR62031754 Chenopodium quinoa HOM05D001312 ORTHO05D001832 5.1e-52 209.1 348 39.4
Dinv29412 Davidia involucrata HOM05D001312 ORTHO05D001832 4.8e-50 202.6 362 38.7
FAN11G4030 Fragaria x ananassa HOM05D001312 ORTHO05D001832 1.7e-47 194.1 348 36.5
FvH4_3g30100 Fragaria vesca HOM05D001312 ORTHO05D001832 2.2e-47 193.7 348 36.2
Dinv12534 Davidia involucrata HOM05D001312 ORTHO05D001832 8.4e-47 191.8 350 37.7
FAN16G2071 Fragaria x ananassa HOM05D001312 ORTHO05D001832 5.5e-46 189.1 348 35.6
FAN25G0002 Fragaria x ananassa HOM05D001312 ORTHO05D001832 7.2e-46 188.7 348 35.9
MD03G1132800 Malus domestica HOM05D001312 ORTHO05D001832 2.7e-45 186.8 338 37.0
Sabra04G0128400 Salix brachista HOM05D001312 ORTHO05D001832 1.0e-44 184.9 347 36.3
RcHm_v2.0_Chr5g0055621 Rosa chinensis HOM05D001312 ORTHO05D001832 1.3e-44 184.5 350 36.6
CiPaw.13G141900 Carya illinoinensis HOM05D001312 ORTHO05D001832 2.3e-44 183.7 365 35.1
FAN21G2146 Fragaria x ananassa HOM05D001312 ORTHO05D001832 3.0e-44 183.3 348 35.3
CSS0005615 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D001832 5.1e-44 182.6 341 37.5
Gorai.006G108600 Gossypium raimondii HOM05D001312 ORTHO05D001832 1.1e-43 181.4 333 36.3
Prupe.6G117600 Prunus persica HOM05D001312 ORTHO05D001832 1.1e-43 181.4 354 37.3
Potri.004G189600 Populus trichocarpa HOM05D001312 ORTHO05D001832 1.5e-43 181.0 351 36.5
GSVIVG01031411001 Vitis vinifera HOM05D001312 ORTHO05D001832 1.5e-43 181.0 341 35.5
Gohir.D09G091966 Gossypium hirsutum HOM05D001312 ORTHO05D001832 9.7e-43 178.3 333 35.7
Lalb_Chr01g0004711 Lupinus albus HOM05D001312 ORTHO05D001832 1.3e-42 177.9 338 36.4
Thecc.09G293200 Theobroma cacao HOM05D001312 ORTHO05D001832 1.3e-42 177.9 369 34.4
Ciclev10027677m.g Citrus clementina HOM05D001312 ORTHO05D001832 2.2e-42 177.2 367 35.7
Ah.01g016710 Amaranthus hybridus HOM05D001312 ORTHO05D001832 3.7e-42 176.4 355 37.5
QL01p014004 Quercus lobata HOM05D001312 ORTHO05D001832 3.7e-42 176.4 382 33.2
Lj3g0003552 Lotus japonicus HOM05D001312 ORTHO05D001832 6.3e-42 175.6 338 37.3
Haze_23465 Corylus avellana HOM05D001312 ORTHO05D001832 1.1e-41 174.9 363 35.0
MD11G1155100 Malus domestica HOM05D001312 ORTHO05D001832 1.1e-41 174.9 341 36.1
Cfa010099 Carpinus fangiana HOM05D001312 ORTHO05D001832 1.4e-41 174.5 365 34.2
BraA02t05684Z Brassica rapa HOM05D001312 ORTHO05D001832 4.1e-41 172.9 339 33.9
COL.COLO4_19275 Corchorus olitorius HOM05D001312 ORTHO05D001832 4.1e-41 172.9 358 34.4
AT5G35210 Arabidopsis thaliana HOM05D001312 ORTHO05D001832 5.3e-41 172.6 332 34.6
BolC2t07191H Brassica oleracea HOM05D001312 ORTHO05D001832 5.3e-41 172.6 337 33.8
Manes.04G010300 Manihot esculenta HOM05D001312 ORTHO05D001832 6.9e-41 172.2 355 34.4
Nn6g35082 Nelumbo nucifera HOM05D001312 ORTHO05D001832 6.9e-41 172.2 341 34.6
AL6G33760 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 9.0e-41 171.8 339 35.1
TAR623G0291 Trochodendron aralioides HOM05D001312 ORTHO05D001832 1.2e-40 171.4 352 33.8
BcaC03g13911 Brassica carinata HOM05D001312 ORTHO05D001832 1.5e-40 171.0 336 33.6
C02p11220 Brassica napus HOM05D001312 ORTHO05D001832 1.5e-40 171.0 336 33.6
Gohir.A09G092100 Gossypium hirsutum HOM05D001312 ORTHO05D001832 2.0e-40 170.6 322 35.7
BNapus_Darmor_BZH_scaffold_38p00420 Brassica napus HOM05D001312 ORTHO05D001832 2.6e-40 170.2 337 34.4
Cc01_g09930 Coffea canephora HOM05D001312 ORTHO05D001832 3.4e-40 169.9 350 35.4
CARHR190830 Cardamine hirsuta HOM05D001312 ORTHO05D001832 4.5e-40 169.5 335 34.0
Lalb_Chr03g0027881 Lupinus albus HOM05D001312 ORTHO05D001832 4.5e-40 169.5 342 38.6
Duzib168G2332 Durio zibethinus HOM05D001312 ORTHO05D001832 1.0e-39 168.3 356 34.6
THA.LOC104799531 Tarenaya hassleriana HOM05D001312 ORTHO05D001832 1.3e-39 167.9 333 33.3
Eucgr.J00416 Eucalyptus grandis HOM05D001312 ORTHO05D001832 2.2e-39 167.2 350 33.7
Carub.0005s1053 Capsella rubella HOM05D001312 ORTHO05D001832 5.0e-39 166.0 335 33.1
BcaB05g22698 Brassica carinata HOM05D001312 ORTHO05D001832 6.5e-39 165.6 344 33.1
Potri.009G150200 Populus trichocarpa HOM05D001312 ORTHO05D001832 8.5e-39 165.2 349 34.4
Actinidia00821 Actinidia chinensis HOM05D001312 ORTHO05D001832 1.4e-38 164.5 356 32.9
Carub.0006s2047 Capsella rubella HOM05D001312 ORTHO05D001832 1.9e-38 164.1 341 32.6
AL5G23240 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 3.2e-38 163.3 331 34.7
CsaV3_6G014620 Cucumis sativus L. HOM05D001312 ORTHO05D001832 3.2e-38 163.3 340 33.2
Manes.11G155800 Manihot esculenta HOM05D001312 ORTHO05D001832 3.2e-38 163.3 352 32.1
Cpa.g.sc47.58 Carica papaya HOM05D001312 ORTHO05D001832 5.5e-38 162.5 351 34.5
TWI79G1536 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 5.5e-38 162.5 341 35.5
ClCG02G021830 Citrullus lanatus HOM05D001312 ORTHO05D001832 1.2e-37 161.4 349 33.8
arahy.Tifrunner.gnm1.ann1.UY40LW Arachis hypogaea HOM05D001312 ORTHO05D001832 1.6e-37 161.0 340 35.3
arahy.Tifrunner.gnm1.ann1.A1GHB6 Arachis hypogaea HOM05D001312 ORTHO05D001832 2.7e-37 160.2 344 34.3
Glyma.12G180700 Glycine max HOM05D001312 ORTHO05D001832 2.7e-37 160.2 337 34.7
Sp6g22660 Schrenkiella parvula HOM05D001312 ORTHO05D001832 6.1e-37 159.1 341 32.8
VMungo1127G0568 Vigna mungo HOM05D001312 ORTHO05D001832 6.1e-37 159.1 351 32.5
Ca_19363_v3 Cicer arietinum L. HOM05D001312 ORTHO05D001832 7.9e-37 158.7 344 33.4
Ca_30478_v3 Cicer arietinum L. HOM05D001312 ORTHO05D001832 7.9e-37 158.7 344 33.4
Thhalv10012428m.g Eutrema salsugineum HOM05D001312 ORTHO05D001832 7.9e-37 158.7 340 32.6
Aa31LG4G14290 Aethionema arabicum HOM05D001312 ORTHO05D001832 1.8e-36 157.5 339 32.7
Sabra09G0118900 Salix brachista HOM05D001312 ORTHO05D001832 1.8e-36 157.5 341 34.0
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 2.3e-36 157.1 319 33.9
BcaC09g49653 Brassica carinata HOM05D001312 ORTHO05D001832 6.7e-36 155.6 337 33.8
C01p34190 Brassica napus HOM05D001312 ORTHO05D001832 6.7e-36 155.6 337 33.8
BolC1t03389H Brassica oleracea HOM05D001312 ORTHO05D001832 6.7e-36 155.6 337 33.8
PGR119G0461 Punica granatum HOM05D001312 ORTHO05D001832 1.5e-35 154.5 336 31.2
A01p26830 Brassica napus HOM05D001312 ORTHO05D001832 4.3e-35 152.9 337 33.8
BraA01t02612Z Brassica rapa HOM05D001312 ORTHO05D001832 4.3e-35 152.9 337 33.8
Sed0012905 Sechium edule HOM05D001312 ORTHO05D001832 4.3e-35 152.9 331 32.9
TWI75G0682 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 4.3e-35 152.9 343 32.9
Glyma.12G084300 Glycine max HOM05D001312 ORTHO05D001832 5.7e-35 152.5 379 31.7
Lsat_1_v5_gn_1_61921 Lactuca sativa HOM05D001312 ORTHO05D001832 5.7e-35 152.5 356 32.3
CAN.G644.40 Capsicum annuum HOM05D001312 ORTHO05D001832 1.3e-34 151.4 355 31.3
Glyma.11G190000 Glycine max HOM05D001312 ORTHO05D001832 2.2e-34 150.6 352 33.8
Nitab4.5_0002571g0030 Nicotiana tabacum HOM05D001312 ORTHO05D001832 3.7e-34 149.8 349 30.9
Glyma.13G320100 Glycine max HOM05D001312 ORTHO05D001832 4.8e-34 149.4 340 34.1
HanXRQChr01g0016711 Helianthus annuus HOM05D001312 ORTHO05D001832 4.8e-34 149.4 346 30.3
Nitab4.5_0000442g0240 Nicotiana tabacum HOM05D001312 ORTHO05D001832 6.3e-34 149.1 349 30.1
PSO339G1313 Papaver somniferum HOM05D001312 ORTHO05D001832 1.8e-33 147.5 399 29.1
Phvul.005G128100 Phaseolus vulgaris HOM05D001312 ORTHO05D001832 1.8e-33 147.5 333 33.3
HanXRQChr11g0346711 Helianthus annuus HOM05D001312 ORTHO05D001832 2.4e-33 147.1 342 30.1
vmacro14380 Vaccinium macrocarpon HOM05D001312 ORTHO05D001832 6.9e-33 145.6 396 29.5
DCAR_022735 Daucus carota HOM05D001312 ORTHO05D001832 9.1e-33 145.2 351 30.8
BcaB01g04696 Brassica carinata HOM05D001312 ORTHO05D001832 1.2e-32 144.8 328 32.3
PSO063G1518 Papaver somniferum HOM05D001312 ORTHO05D001832 1.2e-32 144.8 404 28.0
Peaxi162Scf00789g00216 Petunia axillaris HOM05D001312 ORTHO05D001832 1.5e-32 144.4 357 31.1
MSTRG.21070 Avicennia marina HOM05D001312 ORTHO05D001832 2.6e-32 143.7 379 28.0
unitig_46.g18236 Utricularia gibba HOM05D001312 ORTHO05D001832 2.6e-32 143.7 332 30.7
Nn2g13967 Nelumbo nucifera HOM05D001312 ORTHO05D001832 1.0e-31 141.7 350 30.6
Sopen11g026500 Solanum pennellii HOM05D001312 ORTHO05D001832 1.7e-31 141.0 370 30.3
Lj1C219T5 Lonicera japonica HOM05D001312 ORTHO05D001832 2.9e-31 140.2 346 32.9
Solyc11g066780.3 Solanum lycopersicum HOM05D001312 ORTHO05D001832 2.9e-31 140.2 370 30.5
DCAR_006144 Daucus carota HOM05D001312 ORTHO05D001832 3.8e-31 139.8 364 31.0
BcaC01g06570 Brassica carinata HOM05D001312 ORTHO05D001832 6.5e-31 139.0 332 31.3
C03p12520 Brassica napus HOM05D001312 ORTHO05D001832 6.5e-31 139.0 332 31.3
A03p10880 Brassica napus HOM05D001312 ORTHO05D001832 1.1e-30 138.3 328 31.7
BolC3t13720H Brassica oleracea HOM05D001312 ORTHO05D001832 1.1e-30 138.3 328 32.0
Aqoxy1G00966 Aquilegia oxysepala HOM05D001312 ORTHO05D001832 1.9e-30 137.5 353 32.3
PGSC0003DMG400007126 Solanum tuberosum HOM05D001312 ORTHO05D001832 4.2e-30 136.3 344 31.4
VMungo1080G0366 Vigna mungo HOM05D001312 ORTHO05D001832 5.5e-30 136.0 330 32.7
BraA03t10398Z Brassica rapa HOM05D001312 ORTHO05D001832 7.2e-30 135.6 331 31.1
Rhsim01G0209200 Rhododendron simsii HOM05D001312 ORTHO05D001832 9.4e-30 135.2 389 28.8
Solyc06g074640.2 Solanum lycopersicum HOM05D001312 ORTHO05D001832 9.4e-30 135.2 342 29.5
Migut.N02523 Erythranthe guttata HOM05D001312 ORTHO05D001832 1.6e-29 134.4 340 32.9
Sopen06g031060 Solanum pennellii HOM05D001312 ORTHO05D001832 2.7e-29 133.7 348 30.7
Phvul.011G089300 Phaseolus vulgaris HOM05D001312 ORTHO05D001832 6.1e-29 132.5 312 32.1
CAN.G919.4 Capsicum annuum HOM05D001312 ORTHO05D001832 1.0e-28 131.7 356 27.2
ECA248G2284 Erigeron canadensis HOM05D001312 ORTHO05D001832 1.0e-28 131.7 352 30.4
HPP92_017974 Vanilla planifolia HOM05D001312 ORTHO05D001832 2.3e-28 130.6 316 29.1
HPP92_026720 Vanilla planifolia HOM05D001312 ORTHO05D001832 2.3e-28 130.6 316 29.1
Rhsim13G0104700 Rhododendron simsii HOM05D001312 ORTHO05D001832 3.3e-27 126.7 338 30.2
SGA_v2.0_scaffold27G11600 Striga asiatica HOM05D001312 ORTHO05D001832 5.7e-27 125.9 347 28.5
Ca_01686_v3 Cicer arietinum L. HOM05D001312 ORTHO05D001832 9.7e-27 125.2 326 31.3
Psat7g143680 Pisum sativum HOM05D001312 ORTHO05D001832 1.3e-26 124.8 338 30.2
MELO3C021462.2 Cucumis melo HOM05D001312 ORTHO05D001832 8.2e-26 122.1 310 33.5
Medtr2g084615 Medicago truncatula HOM05D001312 ORTHO05D001832 8.2e-26 122.1 372 28.2
CANSAT64G1407 Cannabis sativa HOM05D001312 ORTHO05D001832 1.4e-25 121.3 358 29.3
TPR.G32362 Trifolium pratense HOM05D001312 ORTHO05D001832 1.4e-25 121.3 360 29.7
Os11g0148700 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D001832 4.1e-25 119.8 351 31.1
Zm00001eb406520 Zea mays HOM05D001312 ORTHO05D001832 3.5e-24 116.7 349 27.2
Migut.D02327 Erythranthe guttata HOM05D001312 ORTHO05D001832 1.0e-23 115.2 360 30.8
Actinidia07206 Actinidia chinensis HOM05D001312 ORTHO05D001832 3.8e-23 113.2 261 32.2
TPR.G20749 Trifolium pratense HOM05D001312 ORTHO05D001832 1.9e-22 110.9 394 27.7
Medtr2g084620 Medicago truncatula HOM05D001312 ORTHO05D001832 1.6e-21 107.8 444 25.0
CSS0034096 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D001832 8.0e-21 105.5 287 30.3
Atru.chr3.3400 Acer truncatum HOM05D001312 ORTHO05D001832 1.8e-20 104.4 226 33.6
Nitab4.5_0004926g0010 Nicotiana tabacum HOM05D001312 ORTHO05D001832 3.0e-20 103.6 309 27.2
CDE02G3010 Ceratophyllum demersum HOM05D001312 ORTHO05D001832 6.7e-20 102.4 324 25.3
Peaxi162Scf00157g00417 Petunia axillaris HOM05D001312 ORTHO05D001832 4.4e-19 99.8 318 26.4
SHI06140 Sapria himalayana HOM05D001312 ORTHO05D001832 2.4e-17 94.0 244 29.5
CDE06G0794 Ceratophyllum demersum HOM05D001312 ORTHO05D001832 3.1e-17 93.6 337 24.9
Actinidia24175 Actinidia chinensis HOM05D001312 ORTHO05D001832 2.9e-15 87.0 260 29.2
Psat5g255240 Pisum sativum HOM05D001312 ORTHO05D001832 2.9e-15 87.0 389 23.1
MSTRG.21072 Avicennia marina HOM05D001312 ORTHO05D001832 1.4e-12 78.2 123 35.0
Zm00001eb092810 Zea mays HOM05D001312 ORTHO05D001832 2.6e-11 73.9 252 25.0
Actinidia03681 Actinidia chinensis HOM05D001312 ORTHO05D001832 5.7e-11 72.8 52 59.6
DCAR_018746 Daucus carota HOM05D001312 ORTHO05D001832 5.7e-11 72.8 87 46.0
ATR0820G030 Amborella trichopoda HOM05D001312 ORTHO05D001832 5.9e-08 62.8 50 40.0
HanXRQChr01g0016741 Helianthus annuus HOM05D001312 ORTHO05D001832 7.7e-08 62.4 51 49.0
Os11g0148800 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D001832 7.7e-08 62.4 136 28.7
SMO115G0301 Selaginella moellendorffii HOM05D001312 ORTHO05D001832 1.1e-06 58.5 83 33.7
Sed0027883 Sechium edule HOM05D001312 ORTHO05D001832 4.2e-06 56.6 44 45.5
SEGI_18852 Sequoiadendron giganteum HOM05D001312 ORTHO05D001832 5.5e-06 56.2 54 42.6


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