Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0003130 Simmondsia chinensis HOM05D011296 ORTHO05D013264 1.9e-219 766.1 585 100.0
Hund00983 Selenicereus undatus HOM05D024247 ORTHO05D019537 1.2e-24 119.0 289 45.3
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 1.9e-22 111.7 312 36.2
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.2e-19 102.4 274 35.8
EL10Ac9g20880 Beta vulgaris HOM05D024247 ORTHO05D019537 1.9e-17 95.1 252 37.3
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 5.1e-15 87.0 293 33.1
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 8.7e-15 86.3 262 34.7
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 1.9e-14 85.1 261 35.6
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 6.2e-13 80.1 258 35.3
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 1.4e-12 79.0 302 30.5
Ah.01g003830 Amaranthus hybridus HOM05D024247 ORTHO05D019537 1.5e-11 75.5 310 31.3
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 5.8e-11 73.6 247 34.4
Nitab4.5_0002674g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 2.2e-10 71.6 128 41.4
MBI06_g45388_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 8.4e-10 69.7 86 45.3
PGSC0003DMG400019976 Solanum tuberosum HOM05D011296 ORTHO05D013264 5.4e-09 67.0 182 35.7
Lalb_Chr22g0356841 Lupinus albus HOM05D012920 ORTHO05D012188 1.6e-08 65.5 232 34.9
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 2.1e-08 65.1 248 31.5
CSS0046433 Camellia sinensis var. sinensis HOM05D011296 ORTHO05D013264 2.7e-08 64.7 97 52.6
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 6.0e-08 63.5 187 33.2
MBI06_g18002_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 1.0e-07 62.8 95 44.2
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 1.8e-07 62.0 242 31.8
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 1.8e-07 62.0 231 29.9
AUR62037387 Chenopodium quinoa HOM05D024247 ORTHO05D019537 2.3e-07 61.6 264 32.6
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 3.0e-07 61.2 321 28.0
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 3.0e-07 61.2 235 30.6
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 3.0e-07 61.2 331 29.3
Eucgr.K01100 Eucalyptus grandis HOM05D020995 ORTHO05D010442 3.0e-07 61.2 325 29.8
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 3.9e-07 60.8 231 29.9
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 2.5e-06 58.2 224 30.4
Peaxi162Scf00384g00512 Petunia axillaris HOM05D011296 ORTHO05D022206 3.3e-06 57.8 207 31.9
HPP92_008741 Vanilla planifolia HOM05D039233 ORTHO05D013264 3.3e-06 57.8 79 46.8
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 4.3e-06 57.4 257 32.3
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.3e-06 57.4 236 32.6
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 5.6e-06 57.0 261 33.3
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 5.6e-06 57.0 228 31.6
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 5.6e-06 57.0 284 28.9
AUR62042308 Chenopodium quinoa HOM05D024247 ORTHO05D019537 9.6e-06 56.2 361 28.0


User provided reference genes

Program Settings