Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0002040 Simmondsia chinensis HOM05D000343 ORTHO05D002777 8.4e-79 297.0 151 100.0
Sc22g0003160 Simmondsia chinensis HOM05D000343 ORTHO05D002777 1.8e-44 183.0 225 52.0
Ah.01g022360 Amaranthus hybridus HOM05D000343 ORTHO05D002777 1.2e-40 170.2 225 47.1
AUR62010134 Chenopodium quinoa HOM05D000343 ORTHO05D002777 2.0e-40 169.5 225 47.1
AUR62013126 Chenopodium quinoa HOM05D000343 ORTHO05D002777 2.6e-40 169.1 225 47.6
Hund00062 Selenicereus undatus HOM05D000343 ORTHO05D002777 4.2e-38 161.8 222 47.3
EL10Ac9g21477 Beta vulgaris HOM05D000343 ORTHO05D002777 5.5e-38 161.4 225 45.3
Aqoxy6G00797 Aquilegia oxysepala HOM05D000343 ORTHO05D002777 2.3e-36 156.0 225 46.7
CSS0044959 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D002777 3.9e-36 155.2 226 45.6
Lj9A353G63 Lonicera japonica HOM05D000343 ORTHO05D002777 5.1e-36 154.8 221 46.6
Cfa005601 Carpinus fangiana HOM05D000343 ORTHO05D002777 1.1e-35 153.7 226 45.6
CANSAT11G1697 Cannabis sativa HOM05D000343 ORTHO05D002777 3.3e-35 152.1 226 45.1
TAR628G1020 Trochodendron aralioides HOM05D000343 ORTHO05D002777 4.3e-35 151.8 226 45.1
QL11p020866 Quercus lobata HOM05D000343 ORTHO05D002777 5.7e-35 151.4 225 44.4
Manes.06G012600 Manihot esculenta HOM05D000343 ORTHO05D002777 1.6e-34 149.8 226 43.8
TWI59G0918 Tripterygium wilfordii HOM05D000343 ORTHO05D002777 1.6e-34 149.8 226 43.4
CiPaw.06G153500 Carya illinoinensis HOM05D000343 ORTHO05D002777 2.2e-34 149.4 225 43.6
Atru.chr6.1136 Acer truncatum HOM05D000343 ORTHO05D002777 3.7e-34 148.7 227 44.1
vmacro01824 Vaccinium macrocarpon HOM05D000343 ORTHO05D002777 3.7e-34 148.7 227 45.4
ClCG10G009250 Citrullus lanatus HOM05D000343 ORTHO05D002777 4.8e-34 148.3 226 42.5
Dinv24191 Davidia involucrata HOM05D000343 ORTHO05D002777 6.3e-34 147.9 226 43.4
Gohir.A03G173900 Gossypium hirsutum HOM05D000343 ORTHO05D002777 8.2e-34 147.5 220 45.0
Hma1.2p1_0704F.1_g206650 Hydrangea macrophylla HOM05D000343 ORTHO05D002777 8.2e-34 147.5 226 45.6
Potri.001G205400 Populus trichocarpa HOM05D000343 ORTHO05D002777 8.2e-34 147.5 226 43.4
Lalb_Chr04g0256531 Lupinus albus HOM05D000343 ORTHO05D002777 1.1e-33 147.1 226 44.2
COL.COLO4_24940 Corchorus olitorius HOM05D000343 ORTHO05D002777 1.4e-33 146.7 220 45.0
Potri.003G024000 Populus trichocarpa HOM05D000343 ORTHO05D002777 1.8e-33 146.4 226 43.8
arahy.Tifrunner.gnm1.ann1.KT5IG2 Arachis hypogaea HOM05D000343 ORTHO05D002777 3.1e-33 145.6 226 43.8
ECA240G1089 Erigeron canadensis HOM05D000343 ORTHO05D002777 3.1e-33 145.6 226 43.4
Cpa.g.sc42.54 Carica papaya HOM05D000343 ORTHO05D002777 5.3e-33 144.8 226 43.4
Lalb_Chr10g0097841 Lupinus albus HOM05D000343 ORTHO05D002777 5.3e-33 144.8 226 44.2
Prupe.8G060400 Prunus persica HOM05D000343 ORTHO05D002777 5.3e-33 144.8 226 44.7
Cc02_g21550 Coffea canephora HOM05D000343 ORTHO05D002777 9.1e-33 144.1 221 43.4
Lsat_1_v5_gn_9_117160 Lactuca sativa HOM05D000343 ORTHO05D002777 9.1e-33 144.1 227 43.2
PSO541G1663 Papaver somniferum HOM05D000343 ORTHO05D002777 1.2e-32 143.7 227 42.7
PSO781G0273 Papaver somniferum HOM05D000343 ORTHO05D002777 1.2e-32 143.7 227 42.7
Sed0012395 Sechium edule HOM05D000343 ORTHO05D002777 1.5e-32 143.3 225 42.2
Actinidia00268 Actinidia chinensis HOM05D000343 ORTHO05D002777 2.0e-32 142.9 226 44.2
Lj4g0019087 Lotus japonicus HOM05D000343 ORTHO05D002777 2.0e-32 142.9 226 43.8
Phvul.002G208800 Phaseolus vulgaris HOM05D000343 ORTHO05D002777 2.0e-32 142.9 226 43.4
MD05G1044900 Malus domestica HOM05D000343 ORTHO05D002777 2.6e-32 142.5 226 43.8
MELO3C019011.2 Cucumis melo HOM05D000343 ORTHO05D002777 3.4e-32 142.1 225 41.8
Duzib132G0085 Durio zibethinus HOM05D000343 ORTHO05D002777 3.4e-32 142.1 152 55.9
Oeu000247.4 Olea europaea HOM05D000343 ORTHO05D002777 3.4e-32 142.1 226 43.4
PGR042G3206 Punica granatum HOM05D000343 ORTHO05D002777 3.4e-32 142.1 226 42.5
RcHm_v2.0_Chr6g0271821 Rosa chinensis HOM05D000343 ORTHO05D002777 3.4e-32 142.1 226 43.4
GSVIVG01038742001 Vitis vinifera HOM05D000343 ORTHO05D002777 3.4e-32 142.1 226 42.5
Migut.B00610 Erythranthe guttata HOM05D000343 ORTHO05D002777 4.5e-32 141.7 227 42.3
Solyc01g105160.4 Solanum lycopersicum HOM05D000343 ORTHO05D002777 4.5e-32 141.7 227 44.5
Sopen01g047690 Solanum pennellii HOM05D000343 ORTHO05D002777 4.5e-32 141.7 227 44.5
Eucgr.G00769 Eucalyptus grandis HOM05D000343 ORTHO05D002777 5.9e-32 141.4 226 41.2
THA.LOC104804410 Tarenaya hassleriana HOM05D000343 ORTHO05D002777 7.7e-32 141.0 226 42.5
HanXRQChr03g0066901 Helianthus annuus HOM05D000343 ORTHO05D002777 1.0e-31 140.6 228 43.0
Sp7g31260 Schrenkiella parvula HOM05D000343 ORTHO05D002777 1.0e-31 140.6 225 40.9
CsaV3_4G009440 Cucumis sativus L. HOM05D000343 ORTHO05D002777 1.7e-31 139.8 225 40.4
Glyma.08G072400 Glycine max HOM05D000343 ORTHO05D002777 1.7e-31 139.8 226 42.9
Thecc.02G138700 Theobroma cacao HOM05D000343 ORTHO05D002777 1.7e-31 139.8 220 42.7
Actinidia23995 Actinidia chinensis HOM05D000343 ORTHO05D002777 2.2e-31 139.4 226 42.9
Ca_18353_v3 Cicer arietinum L. HOM05D000343 ORTHO05D002777 2.2e-31 139.4 226 41.6
SGA_v2.0_scaffold14G07121 Striga asiatica HOM05D000343 ORTHO05D002777 2.2e-31 139.4 226 42.0
Medtr4g094232 Medicago truncatula HOM05D000343 ORTHO05D002777 3.8e-31 138.7 226 41.6
Glyma.05G117400 Glycine max HOM05D000343 ORTHO05D002777 5.0e-31 138.3 226 42.5
Nitab4.5_0002576g0010 Nicotiana tabacum HOM05D000343 ORTHO05D002777 6.5e-31 137.9 227 43.6
ATR0118G027 Amborella trichopoda HOM05D000343 ORTHO05D002777 8.5e-31 137.5 221 41.2
AL7G18010 Arabidopsis lyrata HOM05D000343 ORTHO05D002777 1.1e-30 137.1 224 40.6
AT4G33520 Arabidopsis thaliana HOM05D000343 ORTHO05D002777 1.1e-30 137.1 224 40.6
A01p04740 Brassica napus HOM05D000343 ORTHO05D002777 1.1e-30 137.1 221 42.1
Thhalv10024339m.g Eutrema salsugineum HOM05D000343 ORTHO05D002777 1.1e-30 137.1 224 40.6
MBI02_g08720_MAGBIO Magnolia biondii HOM05D000343 ORTHO05D002777 1.4e-30 136.7 232 41.8
Aa31sc280G30 Aethionema arabicum HOM05D000343 ORTHO05D002777 1.9e-30 136.3 224 41.1
BolC1t00495H Brassica oleracea HOM05D000343 ORTHO05D002777 2.5e-30 136.0 221 41.6
BraA01t00457Z Brassica rapa HOM05D000343 ORTHO05D002777 2.5e-30 136.0 221 41.6
SalBow5G0065 Salvia bowleyana HOM05D000343 ORTHO05D002777 2.5e-30 136.0 225 40.9
SalBow5G1460 Salvia bowleyana HOM05D000343 ORTHO05D002777 2.5e-30 136.0 225 40.9
BcaC09g52169 Brassica carinata HOM05D000343 ORTHO05D002777 4.2e-30 135.2 221 41.6
C01p05150 Brassica napus HOM05D000343 ORTHO05D002777 4.2e-30 135.2 221 41.6
Peaxi162Scf00001g01039 Petunia axillaris HOM05D000343 ORTHO05D002777 7.2e-30 134.4 226 42.0
CAN.G523.72 Capsicum annuum HOM05D000343 ORTHO05D002777 9.4e-30 134.0 226 42.5
Zm00001eb199150 Zea mays HOM05D000343 ORTHO05D002777 9.4e-30 134.0 225 39.6
arahy.Tifrunner.gnm1.ann1.8T0CRQ Arachis hypogaea HOM05D000343 ORTHO05D002777 1.2e-29 133.7 261 37.9
Haze_10703 Corylus avellana HOM05D010280 ORTHO05D002777 1.2e-29 133.7 284 36.3
FvH4_2g11930 Fragaria vesca HOM05D000343 ORTHO05D002777 2.1e-29 132.9 226 41.2
FAN15G3294 Fragaria x ananassa HOM05D000343 ORTHO05D002777 2.1e-29 132.9 226 41.2
FAN24G2206 Fragaria x ananassa HOM05D000343 ORTHO05D002777 2.1e-29 132.9 226 41.2
FAN27G2388 Fragaria x ananassa HOM05D000343 ORTHO05D002777 7.9e-29 131.0 226 40.7
FAN20G2112 Fragaria x ananassa HOM05D000343 ORTHO05D002777 2.3e-28 129.4 226 40.3
Rhsim11G0136600 Rhododendron simsii HOM05D000343 ORTHO05D002777 1.1e-27 127.1 262 36.3
TPR.G10457 Trifolium pratense HOM05D000343 ORTHO05D002777 2.0e-27 126.3 251 37.5
HPP92_002330 Vanilla planifolia HOM05D000343 ORTHO05D002777 1.1e-25 120.6 227 37.9
Ciclev10030175m.g Citrus clementina HOM05D000343 ORTHO05D009884 1.8e-25 119.8 160 47.5
Mapoly0071s0034 Marchantia polymorpha HOM05D000343 ORTHO05D002777 6.5e-23 111.3 210 34.3
Nn5g30120 Nelumbo nucifera HOM05D000343 ORTHO05D002777 8.5e-23 110.9 84 70.2
VMungo0251G0418 Vigna mungo HOM05D000343 ORTHO05D009884 1.4e-22 110.2 108 59.3
AagrBONN_evm.TU.Sc2ySwM_117.4043 Anthoceros agrestis HOM05D000208 ORTHO05D000130 1.9e-22 109.8 211 36.0
CSS0021171 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D002777 4.2e-22 108.6 92 64.1
Pp3c18_10710 Physcomitrium patens HOM05D000343 ORTHO05D002777 2.7e-21 105.9 207 33.8
Pp3c22_10860 Physcomitrium patens HOM05D000343 ORTHO05D002777 3.6e-21 105.5 207 34.3
Gorai.005G220200 Gossypium raimondii HOM05D000343 ORTHO05D002777 7.9e-21 104.4 84 65.5
SEGI_22608 Sequoiadendron giganteum HOM05D000343 ORTHO05D002777 9.1e-17 90.9 90 55.6
CBR_g20392 Chara braunii HOM05D000343 ORTHO05D002777 5.9e-16 88.2 211 28.9
Gohir.D02G197100 Gossypium hirsutum HOM05D000343 ORTHO05D002777 1.2e-13 80.5 161 39.1
SMO011G0027 Selaginella moellendorffii HOM05D000343 ORTHO05D002777 6.1e-13 78.2 89 49.4
Carub.0007s0693 Capsella rubella HOM05D000343 ORTHO05D002777 3.0e-12 75.9 165 35.8
Psat7g098280 Pisum sativum HOM05D000343 ORTHO05D002777 1.5e-11 73.6 167 34.7
CDE12G0847 Ceratophyllum demersum HOM05D000343 ORTHO05D002777 3.3e-11 72.4 191 35.1
Gorai.005G220300 Gossypium raimondii HOM05D000343 ORTHO05D002777 9.7e-11 70.9 85 48.2
Nitab4.5_0002533g0050 Nicotiana tabacum HOM05D000343 ORTHO05D002777 1.8e-09 66.6 92 46.7
unitig_749.g14154 Utricularia gibba HOM05D000343 ORTHO05D002777 3.1e-09 65.9 89 44.9
Cre10.g424775 Chlamydomonas reinhardtii HOM05D000343 ORTHO05D002777 7.0e-09 64.7 75 46.7
SEGI_13611 Sequoiadendron giganteum HOM05D000343 ORTHO05D002777 1.2e-08 63.9 112 38.4
Duzib150G1472 Durio zibethinus HOM05D000343 ORTHO05D002777 1.3e-07 60.5 185 27.0
Sed0004786 Sechium edule HOM05D000343 ORTHO05D002777 3.8e-07 58.9 70 35.7
SMO358G0202 Selaginella moellendorffii HOM05D000343 ORTHO05D002777 5.0e-07 58.5 71 39.4
SGA_v2.0_scaffold20G09154 Striga asiatica HOM05D000343 ORTHO05D002777 6.5e-07 58.2 146 26.0
HanXRQChr03g0065671 Helianthus annuus HOM05D000343 ORTHO05D002777 8.5e-07 57.8 69 37.7
Nitab4.5_0000446g0160 Nicotiana tabacum HOM05D000343 ORTHO05D002777 8.5e-07 57.8 198 24.2
FAN15G2596 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.1e-06 57.4 154 26.6
Lsat_1_v5_gn_7_58281 Lactuca sativa HOM05D000343 ORTHO05D002777 1.5e-06 57.0 62 40.3
CAN.G117.6 Capsicum annuum HOM05D000343 ORTHO05D002777 3.2e-06 55.8 220 21.8
Pp3c16_16360 Physcomitrium patens HOM05D000343 ORTHO05D002777 3.2e-06 55.8 67 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1654 Anthoceros agrestis HOM05D000343 ORTHO05D002777 4.2e-06 55.5 67 37.3
HanXRQChr17g0556951 Helianthus annuus HOM05D000343 ORTHO05D002777 4.2e-06 55.5 34 76.5
Mapoly0079s0021 Marchantia polymorpha HOM05D000343 ORTHO05D002777 5.5e-06 55.1 61 41.0
Thecc.09G063900 Theobroma cacao HOM05D000343 ORTHO05D002777 5.5e-06 55.1 67 37.3
CANSAT25G0648 Cannabis sativa HOM05D000343 ORTHO05D002777 7.2e-06 54.7 71 39.4
Cpa.g.sc126.19 Carica papaya HOM05D000343 ORTHO05D002777 7.2e-06 54.7 63 41.3
Rhsim02G0200800 Rhododendron simsii HOM05D000343 ORTHO05D002777 7.2e-06 54.7 62 41.9
Sed0027862 Sechium edule HOM05D000343 ORTHO05D002777 7.2e-06 54.7 69 33.3


User provided reference genes

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