Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 4.3e-89 332.0 274 100.0
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.0e-42 177.9 282 67.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 7.4e-41 171.8 277 70.8
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 2.1e-40 170.2 281 68.3
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 8.1e-40 168.3 282 68.4
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.4e-39 167.5 283 68.6
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 9.0e-39 164.9 278 67.6
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.2e-38 164.5 278 66.2
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.5e-38 164.1 279 65.9
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 3.4e-38 162.9 280 64.3
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 4.5e-38 162.5 290 63.4
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.4e-36 157.5 274 58.4
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.4e-36 157.5 278 66.9
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.9e-36 157.1 279 67.4
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.9e-36 157.1 283 70.3
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 9.3e-36 154.8 278 66.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.2e-35 154.5 278 68.0
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.7e-35 153.3 278 68.0
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.7e-35 153.3 283 66.1
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.3e-34 151.0 279 61.3
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.8e-34 150.6 282 64.9
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.8e-34 150.6 285 61.4
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 3.0e-34 149.8 277 70.4
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 3.0e-34 149.8 285 65.3
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 5.1e-34 149.1 263 69.2
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 1.1e-33 147.9 280 55.7
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.5e-33 147.5 243 70.8
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.5e-33 147.5 285 65.3
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.5e-33 146.7 276 66.7
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 2.5e-33 146.7 285 63.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 2.5e-33 146.7 301 60.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 2.5e-33 146.7 278 65.1
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.8e-32 143.3 275 66.5
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 8.2e-32 141.7 261 72.4
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 3.1e-31 139.8 277 62.1
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 5.3e-31 139.0 280 60.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.2e-30 137.9 288 57.3
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.5e-30 137.5 260 71.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 2.0e-30 137.1 287 57.1
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.5e-30 136.0 287 53.3
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.0e-29 134.8 291 64.6
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.3e-29 134.4 284 62.0
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.3e-29 134.4 284 62.7
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 2.2e-29 133.7 278 63.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.8e-29 132.9 286 58.0
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 4.9e-29 132.5 277 62.1
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 8.4e-29 131.7 317 57.4
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 7.1e-28 128.6 240 64.6
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.7e-27 126.7 277 61.7
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.6e-27 125.9 278 57.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.0e-26 124.8 150 74.7
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.0e-26 124.8 276 60.9
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.0e-26 124.8 282 62.4
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.8e-26 124.0 236 61.4
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 3.0e-26 123.2 280 61.1
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 3.0e-26 123.2 282 59.2
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 3.0e-26 123.2 284 57.0
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 3.9e-26 122.9 289 63.3
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 3.9e-26 122.9 229 67.7
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.9e-26 122.9 278 52.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.9e-26 122.9 278 52.2
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.9e-26 122.9 282 44.3
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 6.7e-26 122.1 291 59.8
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 6.7e-26 122.1 251 69.7
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 6.7e-26 122.1 290 53.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 3.3e-25 119.8 286 62.2
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 5.7e-25 119.0 283 52.3
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 7.4e-25 118.6 276 57.6
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 7.4e-25 118.6 311 48.2
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 9.7e-25 118.2 275 56.7
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.6e-24 117.5 278 57.6
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 3.7e-24 116.3 274 58.8
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.1e-23 113.2 150 64.0
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.9e-23 112.1 149 65.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 9.0e-23 111.7 231 55.0
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.2e-22 111.3 128 66.4
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 2.0e-22 110.5 276 35.5
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.6e-22 110.2 270 57.4
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 5.9e-22 109.0 285 56.5
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.0e-21 108.2 276 60.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.0e-21 108.2 278 40.6
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 2.2e-21 107.1 103 62.1
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 6.5e-21 105.5 152 48.0
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.9e-20 104.0 308 48.7
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 3.2e-20 103.2 98 60.2
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 3.2e-20 103.2 98 60.2
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 7.2e-20 102.1 99 57.6
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 7.2e-20 102.1 285 55.8
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.2e-19 101.3 270 60.4
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.6e-19 100.9 278 60.1
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 2.1e-19 100.5 97 58.8
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 2.1e-19 100.5 97 58.8
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 3.6e-19 99.8 99 57.6
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 4.6e-19 99.4 99 56.6
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.0e-18 98.2 99 55.6
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.3e-16 91.3 292 54.8
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.4e-15 87.0 286 58.7
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.5e-14 84.3 99 52.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.4e-10 71.2 160 62.5
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 5.1e-10 69.3 99 50.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.5e-09 67.8 45 66.7
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.3e-08 64.7 114 46.5
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.2e-08 63.9 98 51.0
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.1e-07 61.6 57 49.1
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.4e-07 61.2 44 54.5
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.4e-07 61.2 281 36.3
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 4.5e-06 56.2 34 61.8


User provided reference genes

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