Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 3.4e-211 738.0 367 100.0
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 8.1e-152 540.8 368 70.9
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 3.5e-147 525.4 368 68.2
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.6e-145 517.3 370 66.5
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 6.9e-143 511.1 373 67.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 1.3e-141 506.9 367 66.2
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.0e-138 497.3 364 65.1
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.7e-138 496.5 371 64.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 5.1e-138 495.0 371 63.3
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 3.3e-137 492.3 371 62.8
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 9.6e-137 490.7 367 63.5
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.1e-136 489.6 364 64.0
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 8.1e-136 487.6 371 63.6
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.9e-133 479.2 371 60.6
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 3.8e-133 478.8 368 62.5
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 1.4e-132 476.9 367 62.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 9.3e-132 474.2 369 62.1
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.1e-131 473.0 361 61.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.5e-131 472.2 365 61.4
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.5e-131 472.2 368 60.1
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.0e-131 471.5 371 60.4
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.0e-130 470.7 372 61.0
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.3e-130 470.3 362 62.4
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.3e-130 469.5 415 56.6
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.7e-130 468.0 370 58.6
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 1.1e-129 467.2 366 61.5
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 3.3e-129 465.7 361 61.8
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 4.3e-129 465.3 372 59.9
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 5.6e-129 464.9 371 60.1
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.4e-129 464.5 372 59.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.3e-128 463.8 368 58.7
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.6e-128 463.4 365 59.2
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.6e-128 463.4 367 59.9
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.6e-128 463.4 368 59.0
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 2.1e-128 463.0 365 60.5
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 2.8e-128 462.6 368 59.2
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 3.7e-128 462.2 370 59.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 3.7e-128 462.2 368 58.2
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 3.7e-128 462.2 364 60.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 4.8e-128 461.8 368 60.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.8e-128 461.8 368 58.7
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 4.8e-128 461.8 369 59.3
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 6.2e-128 461.5 361 61.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 6.2e-128 461.5 367 59.7
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 8.1e-128 461.1 367 60.2
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 8.1e-128 461.1 368 61.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.1e-127 460.7 367 60.2
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.8e-127 459.9 368 60.6
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.8e-127 459.9 368 58.4
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.1e-127 459.1 372 59.7
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 5.3e-127 458.4 366 60.4
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 5.3e-127 458.4 368 60.3
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 6.9e-127 458.0 368 60.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 6.9e-127 458.0 366 60.1
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 9.0e-127 457.6 368 59.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.2e-126 457.2 364 59.9
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.2e-126 457.2 362 59.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.6e-126 456.1 368 58.4
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 3.4e-126 455.7 366 59.8
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.4e-126 455.7 367 59.9
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 5.8e-126 454.9 362 59.7
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 7.6e-126 454.5 362 60.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.9e-125 451.8 361 59.8
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 8.4e-125 451.1 369 60.2
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.9e-124 449.9 361 59.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 4.2e-124 448.7 380 58.2
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.5e-124 448.4 333 64.6
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 7.1e-124 448.0 339 64.3
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 2.1e-123 446.4 367 59.4
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 6.0e-123 444.9 365 57.8
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 6.0e-123 444.9 361 59.0
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.3e-122 443.7 368 56.8
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.3e-122 443.0 365 57.0
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.3e-121 439.1 388 54.1
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 7.4e-121 438.0 368 58.7
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 6.2e-120 434.9 365 55.9
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 6.2e-120 434.9 362 56.1
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 8.2e-120 434.5 364 56.6
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.5e-118 430.3 360 56.9
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.8e-117 425.6 365 55.1
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 8.4e-117 424.5 342 59.9
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.5e-115 419.1 325 64.6
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 4.6e-115 418.7 393 54.2
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 5.1e-114 415.2 370 55.1
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 6.7e-114 414.8 368 54.9
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 8.7e-114 414.5 365 53.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 7.4e-113 411.4 335 59.1
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.4e-111 406.4 336 59.8
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.9e-108 396.7 371 52.8
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 2.5e-108 396.4 335 56.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.8e-106 390.2 402 50.0
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.3e-105 386.0 369 54.5
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 9.7e-105 384.4 335 54.3
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-104 384.0 299 62.9
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.3e-104 384.0 315 58.4
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.4e-103 379.8 367 52.0
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 7.2e-100 368.2 365 49.9
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.3e-95 352.1 278 61.9
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 5.2e-90 335.5 259 62.9
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.4e-82 310.8 363 42.7
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.0e-82 309.7 221 65.6
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.7e-80 302.8 380 41.6
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.0e-77 292.4 307 50.5
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 8.8e-74 281.6 364 39.0
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 3.4e-73 279.6 255 56.5
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 2.4e-71 273.5 343 41.1
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.1e-50 204.9 220 49.5
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.5e-44 183.7 141 62.4
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 2.5e-44 183.7 447 30.9
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.4e-42 177.9 274 40.1
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 8.6e-37 158.7 397 30.0
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 9.9e-33 145.2 101 65.3
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 9.2e-31 138.7 114 58.8
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.3e-29 134.8 116 55.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.1e-26 125.2 367 27.5
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.2e-23 113.6 87 60.9
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 7.3e-20 102.4 90 48.9
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.1e-14 84.3 69 53.6
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.3e-13 81.6 67 61.2
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.1e-12 78.6 47 68.1
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.8e-11 73.9 51 62.7
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 1.7e-08 64.7 45 57.8
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 6.0e-06 56.2 77 40.3


User provided reference genes

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