Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.1e-102 376.7 195 100.0
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 7.6e-32 141.4 104 66.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 2.4e-30 136.3 114 60.5
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 7.1e-30 134.8 104 64.4
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 9.3e-30 134.4 104 64.4
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.6e-29 133.7 112 63.4
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 3.5e-29 132.5 98 67.3
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 3.5e-29 132.5 114 59.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 4.6e-29 132.1 112 58.9
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.6e-29 132.1 112 58.9
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 7.8e-29 131.3 164 48.8
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.3e-28 130.6 124 55.6
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.3e-28 130.6 92 67.4
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.7e-28 130.2 123 52.8
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.7e-28 130.2 130 55.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 2.3e-28 129.8 112 59.8
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.0e-28 129.4 106 60.4
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 3.0e-28 129.4 104 61.5
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 1.1e-27 127.5 126 51.6
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.5e-27 127.1 112 57.1
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.9e-27 126.7 144 51.4
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 1.9e-27 126.7 126 55.6
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 3.3e-27 125.9 112 57.1
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 3.3e-27 125.9 112 57.1
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 4.3e-27 125.6 101 63.4
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 4.3e-27 125.6 127 52.8
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 5.6e-27 125.2 114 57.9
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 9.6e-27 124.4 96 60.4
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 9.6e-27 124.4 141 48.9
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 9.6e-27 124.4 138 54.3
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 9.6e-27 124.4 145 50.3
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.6e-26 123.6 138 51.4
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.1e-26 123.2 95 63.2
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 2.1e-26 123.2 141 50.4
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.8e-26 122.9 104 57.7
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.6e-26 122.5 170 46.5
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 8.1e-26 121.3 148 46.6
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.1e-25 120.9 141 50.4
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.1e-25 120.9 104 59.6
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.8e-25 120.2 118 52.5
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.4e-25 119.8 151 47.0
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 2.4e-25 119.8 143 49.0
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 2.4e-25 119.8 113 53.1
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.1e-25 119.4 112 54.5
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 4.0e-25 119.0 96 57.3
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 5.3e-25 118.6 102 55.9
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 5.3e-25 118.6 95 61.1
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 6.9e-25 118.2 103 60.2
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 6.9e-25 118.2 102 55.9
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 9.0e-25 117.9 107 54.2
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 9.0e-25 117.9 106 52.8
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 9.0e-25 117.9 130 49.2
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 9.0e-25 117.9 140 50.7
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 2.0e-24 116.7 172 44.8
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 2.0e-24 116.7 142 47.2
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 2.6e-24 116.3 98 60.2
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 4.5e-24 115.5 141 47.5
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 5.8e-24 115.2 172 44.8
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 5.8e-24 115.2 140 47.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.3e-23 114.0 92 59.8
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.7e-23 113.6 170 44.7
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 3.8e-23 112.5 166 42.8
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 3.8e-23 112.5 172 44.2
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 3.8e-23 112.5 137 49.6
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.1e-22 110.9 92 57.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 1.4e-22 110.5 101 53.5
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.9e-22 110.2 149 43.0
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 4.2e-22 109.0 91 57.1
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 5.4e-22 108.6 91 59.3
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 7.1e-22 108.2 147 44.9
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 9.3e-22 107.8 94 57.4
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.2e-21 107.5 86 60.5
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.2e-21 107.5 93 59.1
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.2e-21 107.5 104 52.9
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.6e-21 107.1 108 49.1
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 3.5e-21 105.9 112 53.6
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.0e-20 104.4 87 60.9
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 3.3e-19 99.4 78 60.3
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 5.3e-17 92.0 96 50.0
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 8.4e-15 84.7 120 45.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 8.4e-15 84.7 94 45.7
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.4e-14 83.2 91 45.1
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 5.5e-14 82.0 98 42.9
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.6e-13 80.5 171 35.7
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.3e-12 76.6 92 52.2
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.5e-11 73.9 172 35.5
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-08 62.0 67 46.3


User provided reference genes

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