Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 0.0e+00 1092.8 540 100.0
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 8.6e-219 763.8 407 86.7
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 1.6e-217 759.6 465 79.1
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 1.8e-216 756.1 483 76.2
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 2.4e-216 755.7 469 79.3
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 3.4e-215 751.9 465 78.1
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 3.8e-214 748.4 440 81.1
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 8.4e-214 747.3 471 76.4
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 3.2e-213 745.3 444 79.1
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 7.1e-213 744.2 461 77.4
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.6e-212 743.0 481 75.5
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 3.5e-212 741.9 467 76.2
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 4.6e-212 741.5 478 77.4
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.7e-211 739.6 434 81.6
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 2.3e-211 739.2 486 75.1
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 3.0e-211 738.8 402 86.3
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 3.9e-211 738.4 437 79.9
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 5.1e-211 738.0 467 75.4
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 8.6e-211 737.3 472 76.9
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.1e-210 736.9 482 75.7
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.5e-210 736.5 469 76.8
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 3.3e-210 735.3 434 80.9
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 1.2e-209 733.4 473 75.5
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 1.6e-209 733.0 423 80.4
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 1.6e-209 733.0 476 75.8
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 3.6e-209 731.9 434 80.6
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.6e-209 731.9 462 76.4
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.6e-209 731.9 462 76.4
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 3.6e-209 731.9 435 81.4
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 4.7e-209 731.5 425 82.1
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.4e-208 729.9 475 74.1
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.8e-208 729.6 434 80.2
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 2.4e-208 729.2 442 79.4
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 6.9e-208 727.6 485 76.9
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 6.9e-208 727.6 506 70.9
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 1.2e-207 726.9 485 76.9
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 2.0e-207 726.1 428 80.6
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 9.9e-207 723.8 459 76.3
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 2.9e-206 722.2 408 83.3
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 6.4e-206 721.1 409 82.6
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 1.1e-205 720.3 411 82.5
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 2.4e-205 719.2 473 74.6
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 4.2e-205 718.4 467 75.8
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 7.1e-205 717.6 462 75.3
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 9.3e-205 717.2 467 74.9
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.6e-204 716.5 457 76.1
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 2.1e-204 716.1 409 82.4
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 4.6e-204 714.9 463 75.8
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 6.0e-204 714.5 406 82.5
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 7.8e-204 714.1 402 84.6
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 7.8e-204 714.1 482 72.6
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 3.0e-203 712.2 408 81.4
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 5.1e-203 711.4 466 75.3
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 5.1e-203 711.4 408 82.6
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 1.1e-202 710.3 408 81.9
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 2.5e-202 709.1 450 76.7
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 3.3e-202 708.8 476 73.5
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 7.3e-202 707.6 445 76.4
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 1.6e-201 706.4 462 74.5
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 3.6e-201 705.3 408 81.4
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.4e-200 703.4 411 80.8
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.8e-200 703.0 419 80.0
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 3.1e-200 702.2 408 81.6
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 6.9e-200 701.0 486 72.8
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 1.2e-199 700.3 436 77.5
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 3.4e-199 698.7 407 80.6
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 3.4e-199 698.7 450 74.9
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 4.5e-199 698.4 407 80.6
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 7.6e-199 697.6 470 73.8
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 9.9e-199 697.2 471 73.2
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 1.7e-198 696.4 448 75.4
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.7e-198 696.4 481 71.7
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 2.9e-198 695.7 479 72.2
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 3.8e-198 695.3 464 73.1
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 3.8e-198 695.3 485 72.8
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 6.4e-198 694.5 453 75.3
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.4e-197 693.3 407 80.1
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.4e-197 693.3 407 80.1
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 7.1e-197 691.0 479 71.6
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.0e-195 687.2 444 75.7
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.0e-195 687.2 505 70.7
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 1.8e-192 676.4 428 72.9
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 2.4e-192 676.0 471 71.8
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.2e-190 669.5 471 70.5
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 4.9e-190 668.3 482 68.3
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 1.4e-189 666.8 381 82.2
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.2e-188 663.7 396 77.5
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 2.7e-188 662.5 488 68.6
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.6e-185 653.3 360 85.8
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 4.0e-184 648.7 481 66.5
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 6.5e-182 641.3 471 66.9
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 3.3e-178 629.0 637 57.5
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.3e-177 627.1 471 66.2
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.0e-174 617.5 359 80.5
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 8.5e-174 614.4 450 66.7
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 1.8e-168 596.7 504 62.3
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 2.6e-167 592.8 380 74.7
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 1.1e-162 577.4 406 70.9
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.7e-158 563.5 432 67.1
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 5.5e-157 558.5 483 61.1
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 5.9e-143 511.9 490 58.8
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 1.7e-142 510.4 345 69.0
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 7.2e-141 505.0 441 57.8
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 2.3e-139 500.0 262 87.8
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 3.0e-139 499.6 272 86.0
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 3.5e-135 486.1 433 55.7
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 1.3e-134 484.2 380 61.3
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 9.5e-133 478.0 414 57.5
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.0e-127 460.3 338 69.2
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 4.5e-127 459.1 254 84.3
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 3.8e-126 456.1 258 84.1
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 5.4e-120 435.6 324 67.3
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 8.9e-115 418.3 248 79.8
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 1.3e-113 414.5 437 49.9
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 5.4e-112 409.1 384 54.2
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 5.8e-106 389.0 395 50.4
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.6e-103 380.9 234 78.6
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 3.4e-98 363.2 529 40.1
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 4.6e-95 352.8 266 66.2
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 3.9e-94 349.7 454 43.4
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 1.3e-73 281.6 190 70.5
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 1.9e-72 277.7 175 76.6
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 9.3e-72 275.4 252 56.3
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.8e-60 236.5 140 78.6
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 7.9e-55 219.2 289 45.7
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 8.8e-54 215.7 184 62.0
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 1.7e-52 211.5 235 54.0
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 1.1e-51 208.8 316 37.7
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 1.9e-48 198.0 184 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 3.2e-48 197.2 303 36.6
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 1.0e-46 192.2 360 33.1
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 4.8e-44 183.3 112 75.0
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 6.3e-44 183.0 143 62.9
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 4.5e-42 176.8 349 35.2
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 2.1e-39 167.9 333 34.2
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 2.2e-36 157.9 307 32.2
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 2.4e-35 154.5 148 58.8
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 1.7e-33 148.3 150 50.0
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 1.4e-27 128.6 117 59.8
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.6e-26 125.2 92 68.5
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.7e-25 121.7 113 59.3
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 2.2e-25 121.3 255 36.9
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.0e-21 108.2 102 50.0
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 1.8e-19 101.7 99 57.6
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 2.3e-14 84.7 109 52.3
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 8.9e-14 82.8 108 47.2
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 1.0e-09 69.3 147 30.6
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.3e-09 68.2 38 86.8
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 2.1e-07 61.6 31 83.9
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 2.8e-07 61.2 95 37.9
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 2.8e-07 61.2 95 37.9
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 3.6e-07 60.8 95 36.8


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