Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 0.0e+00 1529.2 1026 100.0
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 0.0e+00 1148.7 1030 81.3
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 0.0e+00 1131.3 1028 81.7
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.2e-301 1040.0 1037 77.1
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 5.5e-299 1031.2 1060 74.6
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.8e-295 1018.8 1030 77.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 5.9e-293 1011.1 1046 75.0
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.2e-280 970.3 1052 72.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 5.7e-280 968.0 1046 72.5
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 1.4e-278 963.4 1064 72.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.4e-278 963.4 1064 71.2
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 7.0e-278 961.1 1111 68.7
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.1e-278 960.7 1081 71.7
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 7.7e-277 957.6 1086 70.7
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.3e-276 956.1 1045 71.9
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.9e-276 955.7 1106 69.6
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.1e-275 953.7 1045 73.1
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.5e-275 953.4 1047 71.8
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 9.5e-275 950.7 1048 71.8
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.0e-273 947.2 1032 72.4
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.3e-273 946.0 1048 71.4
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.3e-273 946.0 1048 71.4
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.2e-273 944.9 1045 71.7
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 8.9e-273 944.1 1105 69.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 5.7e-272 941.4 1053 61.3
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 5.7e-272 941.4 1048 71.2
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 9.8e-272 940.6 1064 70.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.8e-271 939.1 1102 69.5
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 4.9e-271 938.3 1107 68.1
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.6e-269 933.3 1049 71.3
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.0e-269 932.9 1087 69.4
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 5.9e-269 931.4 1064 70.0
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.8e-269 931.0 1052 70.5
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.3e-268 930.2 1050 70.5
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 3.8e-268 928.7 1111 67.9
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.8e-268 928.7 1056 69.9
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.1e-267 927.2 1132 67.4
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 7.3e-267 924.5 1111 68.0
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.2e-266 923.7 1109 68.3
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.8e-266 922.5 1049 70.1
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.6e-266 922.2 1112 67.6
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.0e-265 920.6 1110 68.3
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.0e-265 918.7 1031 71.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.5e-264 916.8 1045 70.7
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 2.0e-264 916.4 1052 69.3
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.0e-264 916.4 1111 67.7
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 3.4e-264 915.6 1050 69.0
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 4.1e-262 908.7 1106 67.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 9.2e-262 907.5 1048 69.6
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.5e-261 905.6 1029 71.1
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 3.0e-260 902.5 1043 70.5
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.9e-260 902.1 1082 67.2
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 3.3e-259 899.0 1031 70.2
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.6e-258 896.7 1044 69.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.6e-258 895.6 1047 69.9
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.4e-257 893.6 1040 70.2
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 5.2e-257 891.7 1060 68.9
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-256 890.6 1048 68.9
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 3.7e-255 885.6 1050 68.7
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1081 68.3
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.9e-254 883.2 1081 68.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.5e-251 873.6 1041 68.0
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.5e-251 873.6 1022 69.2
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.2e-250 870.5 1087 66.8
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 8.1e-250 867.8 1051 65.3
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.1e-250 867.8 1070 68.0
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-249 867.1 1059 65.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.4e-249 867.1 1059 65.3
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 1.8e-249 866.7 1049 66.3
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.3e-249 866.3 1070 68.3
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 5.2e-249 865.1 1078 64.3
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 8.3e-247 857.8 1053 67.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 2.1e-245 853.2 1058 61.6
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 4.6e-245 852.0 1047 68.1
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 6.0e-245 851.7 1045 68.3
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.0e-244 850.9 1211 47.6
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-244 850.5 1050 65.1
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.1e-241 840.9 1110 65.3
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 3.1e-241 839.3 1063 61.9
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 4.0e-241 839.0 1057 67.1
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.5e-240 837.0 1133 45.7
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 7.6e-240 834.7 1084 63.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 4.2e-238 828.9 1064 66.5
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 4.6e-237 825.5 1050 65.8
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 3.9e-236 822.4 1059 63.8
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 8.1e-234 814.7 1057 63.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 4.0e-233 812.4 1020 65.3
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 7.1e-222 775.0 1052 65.7
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 7.9e-221 771.5 485 75.5
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 8.7e-220 768.1 913 72.3
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 4.9e-215 752.3 911 70.8
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 8.4e-215 751.5 486 72.8
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 3.5e-213 746.1 487 72.3
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.8e-212 743.8 488 73.4
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.5e-208 730.7 1033 55.4
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.5e-205 719.5 1030 58.7
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-203 714.5 809 64.3
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 7.4e-203 711.8 487 71.0
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.3e-202 711.1 990 58.9
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.7e-194 684.1 1027 60.2
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 1.0e-172 611.7 916 63.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 7.5e-171 605.5 483 62.5
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.5e-166 591.3 829 70.6
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 2.7e-165 587.0 959 56.3
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.5e-147 528.1 445 62.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 8.9e-140 502.3 1032 45.3
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 2.3e-135 487.6 1021 47.2
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 5.1e-127 459.9 770 68.6
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.1e-105 389.0 253 70.4
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.2e-96 359.0 533 38.5
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 7.9e-88 329.7 495 41.8
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.3e-87 328.2 205 75.1
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 5.7e-86 323.6 701 57.3
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 1.2e-83 315.8 202 74.8
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 3.8e-82 310.8 335 54.6
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 2.5e-73 281.6 347 49.3
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.3e-71 275.0 340 51.2
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.5e-65 255.0 452 35.4
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-61 242.7 493 34.7
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-59 236.1 166 71.7
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 7.7e-59 233.4 299 49.2
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 2.2e-58 231.9 266 50.0
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 4.0e-47 194.5 162 63.0
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 7.7e-43 180.3 132 62.1
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 5.6e-41 174.1 99 80.8
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 5.4e-36 157.5 139 56.1
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.0e-36 157.1 112 69.6
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 9.2e-36 156.8 139 56.1
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 2.0e-35 155.6 122 66.4
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.6e-35 154.5 90 81.1
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 7.8e-35 153.7 182 49.5
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.3e-33 147.9 93 76.3
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.4e-30 137.9 74 77.0
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.3e-26 126.3 76 78.9
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 6.6e-26 124.0 93 63.4
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.2e-22 113.2 164 43.3
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 3.9e-18 98.2 102 56.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 5.2e-15 87.8 127 40.9
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.2e-14 86.7 120 41.7
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.4e-12 79.0 45 82.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.7e-10 72.8 61 62.3
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 9.6e-09 67.0 187 28.3


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