Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002320 Simmondsia chinensis HOM05D005429 ORTHO05D006697 7.9e-64 247.3 158 100.0
TAR624G1317 Trochodendron aralioides HOM05D005429 ORTHO05D006697 9.4e-49 197.2 154 81.2
GSVIVG01036692001 Vitis vinifera HOM05D005429 ORTHO05D006697 2.7e-48 195.7 126 81.0
QL11p022585 Quercus lobata HOM05D005429 ORTHO05D006697 4.0e-47 191.8 128 78.9
Prupe.7G260300 Prunus persica HOM05D005429 ORTHO05D006697 8.8e-47 190.7 124 81.5
Hund11041 Selenicereus undatus HOM05D005429 ORTHO05D006697 8.8e-47 190.7 159 81.1
Potri.008G080700 Populus trichocarpa HOM05D005429 ORTHO05D006697 1.2e-46 190.3 154 80.5
Cpa.g.sc16.3 Carica papaya HOM05D005429 ORTHO05D006697 1.5e-46 189.9 156 79.5
CSS0004524 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.0e-46 189.5 153 80.4
CSS0015948 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.0e-46 189.5 153 82.4
CSS0034504 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.0e-46 189.5 153 82.4
Dinv42877 Davidia involucrata HOM05D005429 ORTHO05D006697 2.0e-46 189.5 155 80.6
Dinv43223 Davidia involucrata HOM05D005429 ORTHO05D006697 2.0e-46 189.5 155 80.6
Duzib116G0688 Durio zibethinus HOM05D005429 ORTHO05D006697 2.0e-46 189.5 122 81.1
Gohir.D02G066500 Gossypium hirsutum HOM05D005429 ORTHO05D006697 2.0e-46 189.5 121 81.8
CiPaw.05G164700 Carya illinoinensis HOM05D005429 ORTHO05D006697 4.4e-46 188.3 124 79.8
Ciclev10022715m.g Citrus clementina HOM05D005429 ORTHO05D006697 5.7e-46 188.0 124 79.8
Gorai.005G075400 Gossypium raimondii HOM05D005429 ORTHO05D006697 5.7e-46 188.0 121 81.0
Psat1g130720 Pisum sativum HOM05D005429 ORTHO05D006697 7.5e-46 187.6 124 79.8
Medtr2g062860 Medicago truncatula HOM05D005429 ORTHO05D006697 9.8e-46 187.2 124 80.6
COL.COLO4_05834 Corchorus olitorius HOM05D005429 ORTHO05D006697 1.3e-45 186.8 121 80.2
Gohir.A02G061000 Gossypium hirsutum HOM05D005429 ORTHO05D006697 2.2e-45 186.0 119 82.4
Lj7A456T20 Lonicera japonica HOM05D005429 ORTHO05D006697 2.2e-45 186.0 128 77.3
EL10Ac5g12584 Beta vulgaris HOM05D005429 ORTHO05D006697 2.8e-45 185.7 125 78.4
Cfa010706 Carpinus fangiana HOM05D005429 ORTHO05D006697 2.8e-45 185.7 124 79.0
AUR62006203 Chenopodium quinoa HOM05D005429 ORTHO05D006697 2.8e-45 185.7 128 78.9
AUR62030412 Chenopodium quinoa HOM05D005429 ORTHO05D006697 2.8e-45 185.7 128 78.9
LjContig00222g0019384 Lotus japonicus HOM05D005429 ORTHO05D006697 3.7e-45 185.3 153 77.8
Rhsim03G0256400 Rhododendron simsii HOM05D005429 ORTHO05D006697 3.7e-45 185.3 124 79.8
Rhsim10G0195600 Rhododendron simsii HOM05D005429 ORTHO05D006697 3.7e-45 185.3 124 79.8
Thecc.05G251100 Theobroma cacao HOM05D005429 ORTHO05D006697 4.8e-45 184.9 125 77.6
Dinv44073 Davidia involucrata HOM05D005429 ORTHO05D006697 6.3e-45 184.5 156 80.8
Eucgr.C03287 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.1e-44 183.7 124 78.2
VMungo1080G0054 Vigna mungo HOM05D005429 ORTHO05D006697 1.1e-44 183.7 154 78.6
Lsat_1_v5_gn_2_59100 Lactuca sativa HOM05D005429 ORTHO05D006697 1.4e-44 183.3 124 77.4
BcaB02g06622 Brassica carinata HOM05D005429 ORTHO05D006697 1.8e-44 183.0 121 78.5
ClCG11G011870 Citrullus lanatus HOM05D005429 ORTHO05D006697 1.8e-44 183.0 126 77.0
Ca_03324_v3 Cicer arietinum L. HOM05D005429 ORTHO05D006697 2.4e-44 182.6 124 77.4
Eucgr.C04279 Eucalyptus grandis HOM05D005429 ORTHO05D006697 2.4e-44 182.6 124 78.2
Nitab4.5_0009812g0020 Nicotiana tabacum HOM05D005429 ORTHO05D006697 2.4e-44 182.6 155 78.7
TWI18G1141 Tripterygium wilfordii HOM05D005429 ORTHO05D006697 2.4e-44 182.6 123 78.0
Cc02_g22920 Coffea canephora HOM05D005429 ORTHO05D006697 3.1e-44 182.2 155 78.7
Eucgr.F00079 Eucalyptus grandis HOM05D005429 ORTHO05D006697 3.1e-44 182.2 124 77.4
THA.LOC104812397 Tarenaya hassleriana HOM05D005429 ORTHO05D006697 3.1e-44 182.2 154 77.9
Manes.03G077300 Manihot esculenta HOM05D005429 ORTHO05D006697 4.1e-44 181.8 154 76.0
Nitab4.5_0000548g0210 Nicotiana tabacum HOM05D005429 ORTHO05D006697 4.1e-44 181.8 126 76.2
MSTRG.26291 Avicennia marina HOM05D005429 ORTHO05D006697 5.4e-44 181.4 125 77.6
Phvul.005G043700 Phaseolus vulgaris HOM05D005429 ORTHO05D006697 5.4e-44 181.4 123 77.2
Actinidia23548 Actinidia chinensis HOM05D005429 ORTHO05D006697 7.0e-44 181.0 123 78.0
ECA238G3108 Erigeron canadensis HOM05D005429 ORTHO05D006697 7.0e-44 181.0 152 75.0
Sp1g14580 Schrenkiella parvula HOM05D005429 ORTHO05D006697 7.0e-44 181.0 121 77.7
vmacro06089 Vaccinium macrocarpon HOM05D005429 ORTHO05D006697 7.0e-44 181.0 121 80.2
BraA06t24400Z Brassica rapa HOM05D005429 ORTHO05D006697 9.1e-44 180.6 123 75.6
MELO3C021751.2 Cucumis melo HOM05D005429 ORTHO05D006697 9.1e-44 180.6 123 77.2
DCAR_027354 Daucus carota HOM05D005429 ORTHO05D006697 9.1e-44 180.6 124 77.4
Glyma.08G160100 Glycine max HOM05D005429 ORTHO05D006697 9.1e-44 180.6 155 78.7
CsaV3_1G046300 Cucumis sativus L. HOM05D005429 ORTHO05D006697 1.2e-43 180.3 126 75.4
Aqoxy3G02759 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 1.6e-43 179.9 153 78.4
HanXRQChr14g0437971 Helianthus annuus HOM05D005429 ORTHO05D006697 1.6e-43 179.9 122 77.0
BcaC05g25573 Brassica carinata HOM05D005429 ORTHO05D006697 2.0e-43 179.5 121 76.0
C05p14630 Brassica napus HOM05D005429 ORTHO05D006697 2.0e-43 179.5 121 76.0
BolC5t30184H Brassica oleracea HOM05D005429 ORTHO05D006697 2.0e-43 179.5 121 76.0
Thecc.08G200900 Theobroma cacao HOM05D005429 ORTHO05D006697 2.7e-43 179.1 123 75.6
Aa31LG7G970 Aethionema arabicum HOM05D005429 ORTHO05D006697 4.5e-43 178.3 152 75.0
A06p12360 Brassica napus HOM05D005429 ORTHO05D006697 4.5e-43 178.3 121 75.2
Glyma.15G204300 Glycine max HOM05D005429 ORTHO05D006697 4.5e-43 178.3 157 75.8
arahy.Tifrunner.gnm1.ann1.WT0EG6 Arachis hypogaea HOM05D005429 ORTHO05D006697 7.7e-43 177.6 154 79.2
Sabra08G0060000 Salix brachista HOM05D005429 ORTHO05D006697 7.7e-43 177.6 154 76.6
Lalb_Chr01g0015641 Lupinus albus HOM05D005429 ORTHO05D006697 1.0e-42 177.2 153 77.8
Solyc03g083300.3 Solanum lycopersicum HOM05D005429 ORTHO05D006697 1.0e-42 177.2 155 72.3
Sopen03g023050 Solanum pennellii HOM05D005429 ORTHO05D006697 1.0e-42 177.2 155 72.3
Atru.chr3.2997 Acer truncatum HOM05D005429 ORTHO05D006697 1.3e-42 176.8 165 63.0
AL1G28560 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 1.3e-42 176.8 121 75.2
PGSC0003DMG400009083 Solanum tuberosum HOM05D005429 ORTHO05D006697 1.3e-42 176.8 155 72.3
arahy.Tifrunner.gnm1.ann1.9U3PF1 Arachis hypogaea HOM05D005429 ORTHO05D006697 1.7e-42 176.4 151 80.1
Migut.N01785 Erythranthe guttata HOM05D005429 ORTHO05D006697 2.2e-42 176.0 152 79.6
TPR.G39484 Trifolium pratense HOM05D005429 ORTHO05D006697 2.2e-42 176.0 124 75.0
AT1G07950 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 5.0e-42 174.9 121 75.2
AT1G16430 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 5.0e-42 174.9 123 73.2
CARHR016900 Cardamine hirsuta HOM05D005429 ORTHO05D006697 5.0e-42 174.9 121 75.2
Nn4g23117 Nelumbo nucifera HOM05D005429 ORTHO05D006697 5.0e-42 174.9 123 76.4
Sed0018631 Sechium edule HOM05D005429 ORTHO05D006697 8.5e-42 174.1 122 74.6
PSO832G0230 Papaver somniferum HOM05D005429 ORTHO05D006697 1.5e-41 173.3 124 75.0
PGR083G0776 Punica granatum HOM05D005429 ORTHO05D006697 1.5e-41 173.3 126 73.0
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 1.9e-41 172.9 125 75.2
Ah.04g163250 Amaranthus hybridus HOM05D005429 ORTHO05D006697 2.5e-41 172.6 127 74.0
AL1G18280 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 2.5e-41 172.6 121 74.4
Carub.0001s0730 Capsella rubella HOM05D005429 ORTHO05D006697 2.5e-41 172.6 121 74.4
CDE02G4404 Ceratophyllum demersum HOM05D005429 ORTHO05D006697 2.5e-41 172.6 127 70.1
PSO210G6955 Papaver somniferum HOM05D005429 ORTHO05D006697 3.2e-41 172.2 124 74.2
PSO384G3609 Papaver somniferum HOM05D005429 ORTHO05D006697 3.2e-41 172.2 124 73.4
CANSAT56G3386 Cannabis sativa HOM05D005429 ORTHO05D006697 4.2e-41 171.8 122 73.0
SGA_v2.0_scaffold147G36309 Striga asiatica HOM05D005429 ORTHO05D006697 5.5e-41 171.4 152 77.6
Peaxi162Scf03254g00010 Petunia axillaris HOM05D005429 ORTHO05D006697 4.7e-40 168.3 125 74.4
Thhalv10008938m.g Eutrema salsugineum HOM05D005429 ORTHO05D006697 6.1e-40 167.9 130 68.5
PSO339G4006 Papaver somniferum HOM05D005429 ORTHO05D006697 1.4e-39 166.8 124 71.8
RcHm_v2.0_Chr5g0022991 Rosa chinensis HOM05D005429 ORTHO05D006697 3.0e-39 165.6 119 72.3
HPP92_024623 Vanilla planifolia HOM05D005429 ORTHO05D006697 1.2e-38 163.7 123 69.9
FAN16G2737 Fragaria x ananassa HOM05D005429 ORTHO05D006697 5.7e-38 161.4 148 70.9
Carub.0001s1617 Capsella rubella HOM05D005429 ORTHO05D006697 9.8e-38 160.6 121 71.1
FvH4_3g13800 Fragaria vesca HOM05D005429 ORTHO05D006697 9.8e-38 160.6 119 70.6
FAN11G0784 Fragaria x ananassa HOM05D005429 ORTHO05D006697 9.8e-38 160.6 119 70.6
FAN21G1331 Fragaria x ananassa HOM05D005429 ORTHO05D006697 9.8e-38 160.6 119 70.6
unitig_749.g13420 Utricularia gibba HOM05D005429 ORTHO05D006697 2.2e-37 159.5 118 67.8
DCAR_014816 Daucus carota HOM05D005429 ORTHO05D006697 2.8e-37 159.1 119 69.7
FAN25G2434 Fragaria x ananassa HOM05D005429 ORTHO05D006697 2.8e-37 159.1 119 69.7
QL04p071374 Quercus lobata HOM05D005429 ORTHO05D006697 2.8e-37 159.1 103 81.6
SGA_v2.0_scaffold19G08578 Striga asiatica HOM05D005429 ORTHO05D006697 2.8e-37 159.1 116 72.4
Hma1.2p1_0817F.1_g223090 Hydrangea macrophylla HOM05D005429 ORTHO05D006697 6.3e-37 157.9 155 71.6
Peaxi162Scf00003g03942 Petunia axillaris HOM05D005429 ORTHO05D006697 8.3e-37 157.5 125 69.6
QL02p100061 Quercus lobata HOM05D005429 ORTHO05D006697 1.1e-36 157.1 199 49.7
ATR0019G018 Amborella trichopoda HOM05D005429 ORTHO05D006697 1.4e-36 156.8 122 66.4
Oeu051694.1 Olea europaea HOM05D005429 ORTHO05D006697 9.2e-36 154.1 109 75.2
Haze_03266 Corylus avellana HOM05D005429 ORTHO05D006697 2.0e-35 152.9 103 79.6
Peaxi162Scf00003g04025 Petunia axillaris HOM05D005429 ORTHO05D006697 1.7e-34 149.8 102 79.4
SEGI_11251 Sequoiadendron giganteum HOM05D005429 ORTHO05D006697 2.3e-34 149.4 159 52.2
unitig_26.g9672 Utricularia gibba HOM05D005429 ORTHO05D006697 2.3e-34 149.4 125 61.6
Os08g0480500 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 6.6e-34 147.9 126 62.7
Haze_03271 Corylus avellana HOM05D005429 ORTHO05D001402 3.3e-33 145.6 99 77.8
Peaxi162Scf03393g00016 Petunia axillaris HOM05D005429 ORTHO05D006697 1.6e-32 143.3 93 81.7
Zm00001eb335330 Zea mays HOM05D005429 ORTHO05D006697 1.4e-31 140.2 122 62.3
MD02G1009700 Malus domestica HOM05D005429 ORTHO05D006697 2.3e-31 139.4 124 62.1
Mapoly0161s0019 Marchantia polymorpha HOM05D005429 ORTHO05D006697 7.5e-30 134.4 120 58.3
Eucgr.C04273 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.3e-29 133.7 94 74.5
Os01g0132700 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 2.0e-27 126.3 126 54.8
Pp3c20_1390 Physcomitrium patens HOM05D005429 ORTHO05D006697 5.9e-27 124.8 122 53.3
Pp3c24_19620 Physcomitrium patens HOM05D005429 ORTHO05D006697 5.9e-27 124.8 124 51.6
SMO141G0142 Selaginella moellendorffii HOM05D005429 ORTHO05D006697 5.0e-26 121.7 123 52.8
Aqoxy3G02314 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 1.9e-25 119.8 83 77.1
AagrBONN_evm.TU.Sc2ySwM_117.1673 Anthoceros agrestis HOM05D005429 ORTHO05D006697 4.3e-25 118.6 121 50.4
Oeu050474.1 Olea europaea HOM05D005429 ORTHO05D006697 8.3e-21 104.4 83 67.5
Peaxi162Scf03393g00018 Petunia axillaris HOM05D005429 ORTHO05D006697 4.6e-19 98.6 67 76.1
Eucgr.L02967 Eucalyptus grandis HOM05D005429 ORTHO05D006697 6.0e-19 98.2 101 56.4
CAN.G1618.6 Capsicum annuum HOM05D005429 ORTHO05D006697 1.3e-18 97.1 91 56.0
CAN.G584.55 Capsicum annuum HOM05D005429 ORTHO05D006697 1.3e-18 97.1 91 56.0
Eucgr.C04269 Eucalyptus grandis HOM05D005429 ORTHO05D006697 9.5e-17 90.9 96 57.3
SGA_v2.0_scaffold19G08613 Striga asiatica HOM05D005429 ORTHO05D006697 6.0e-11 71.6 70 62.9
SGA_v2.0_scaffold19G08607 Striga asiatica HOM05D005429 ORTHO05D006697 1.0e-10 70.9 83 55.4
SGA_v2.0_scaffold711G53500 Striga asiatica HOM05D005429 ORTHO05D006697 1.0e-10 70.9 83 55.4
Zm00001eb228470 Zea mays HOM05D005429 ORTHO05D006697 1.5e-09 67.0 50 64.0
Peaxi162Scf00003g04026 Petunia axillaris HOM05D000011 ORTHO05D011267 1.9e-09 66.6 49 69.4


User provided reference genes

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