Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 5.6e-72 274.2 145 100.0
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 2.9e-60 235.3 145 84.1
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 3.7e-60 235.0 145 84.8
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 4.9e-60 234.6 145 84.1
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 6.4e-60 234.2 142 85.9
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 2.4e-59 232.3 145 83.4
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 2.4e-59 232.3 145 84.8
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 3.2e-59 231.9 145 84.1
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 4.1e-59 231.5 145 84.1
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 5.4e-59 231.1 145 84.1
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 9.2e-59 230.3 145 82.8
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 1.2e-58 229.9 142 83.8
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 1.2e-58 229.9 145 82.8
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 1.6e-58 229.6 145 81.4
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 1.6e-58 229.6 145 82.8
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 1.6e-58 229.6 145 82.8
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 2.1e-58 229.2 145 82.1
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 2.7e-58 228.8 144 81.9
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 4.6e-58 228.0 145 82.8
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 6.0e-58 227.6 145 81.4
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 6.0e-58 227.6 142 83.8
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 7.8e-58 227.3 138 84.8
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 7.8e-58 227.3 145 81.4
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 1.0e-57 226.9 145 80.0
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 1.0e-57 226.9 145 82.1
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.3e-57 226.5 145 81.4
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 1.3e-57 226.5 144 81.2
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.3e-57 226.5 142 83.1
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 1.3e-57 226.5 142 83.1
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 1.3e-57 226.5 143 82.5
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 1.7e-57 226.1 145 78.6
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 3.0e-57 225.3 145 80.7
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 3.9e-57 224.9 145 80.7
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.9e-57 224.9 145 80.7
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 3.9e-57 224.9 145 80.0
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 5.1e-57 224.6 138 84.8
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 6.6e-57 224.2 145 81.4
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 8.6e-57 223.8 145 80.7
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 1.1e-56 223.4 145 79.3
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 1.1e-56 223.4 145 79.3
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 1.5e-56 223.0 145 79.3
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.9e-56 222.6 145 80.0
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 1.9e-56 222.6 145 80.0
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 1.9e-56 222.6 145 80.0
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 1.9e-56 222.6 145 80.0
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.5e-56 222.2 145 80.7
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 3.3e-56 221.9 141 79.4
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 3.3e-56 221.9 145 80.0
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 3.3e-56 221.9 145 78.6
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 3.3e-56 221.9 145 80.0
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 4.3e-56 221.5 145 80.0
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 4.3e-56 221.5 145 80.0
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 5.6e-56 221.1 145 80.0
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 5.6e-56 221.1 145 80.0
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 7.3e-56 220.7 145 77.9
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 9.5e-56 220.3 145 77.2
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 9.5e-56 220.3 145 80.7
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 1.2e-55 219.9 145 79.3
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 1.2e-55 219.9 147 80.3
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 1.6e-55 219.5 145 78.6
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 1.6e-55 219.5 145 79.3
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 2.1e-55 219.2 145 77.2
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 8.1e-55 217.2 145 78.6
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 8.1e-55 217.2 145 78.6
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 8.1e-55 217.2 145 78.6
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 8.1e-55 217.2 145 78.6
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 8.1e-55 217.2 144 75.7
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 8.1e-55 217.2 145 78.6
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 1.1e-54 216.9 185 67.0
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 1.1e-54 216.9 145 77.2
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 1.1e-54 216.9 144 75.7
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 1.4e-54 216.5 145 75.9
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 1.4e-54 216.5 145 76.6
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 1.4e-54 216.5 145 75.9
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 1.8e-54 216.1 136 83.1
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 1.8e-54 216.1 145 78.6
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 1.8e-54 216.1 144 78.5
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 1.8e-54 216.1 145 75.9
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 2.4e-54 215.7 145 76.6
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 2.4e-54 215.7 145 76.6
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 2.4e-54 215.7 145 75.9
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 2.4e-54 215.7 144 77.8
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 3.1e-54 215.3 145 76.6
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 3.1e-54 215.3 145 76.6
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 3.1e-54 215.3 145 76.6
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 3.1e-54 215.3 145 77.2
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 3.1e-54 215.3 147 78.9
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 6.8e-54 214.2 138 79.7
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 8.9e-54 213.8 145 75.2
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 1.5e-53 213.0 139 80.6
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 3.4e-53 211.8 145 77.2
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 3.4e-53 211.8 145 74.5
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 1.7e-52 209.5 145 76.6
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 2.9e-52 208.8 145 74.5
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 3.8e-52 208.4 145 74.5
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 6.4e-52 207.6 150 72.7
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 1.1e-51 206.8 145 70.3
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 1.1e-51 206.8 148 75.7
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 1.1e-51 206.8 145 73.8
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.2e-50 203.4 130 76.9
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.7e-50 202.2 129 77.5
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 3.5e-50 201.8 145 73.1
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 2.3e-49 199.1 142 73.2
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 6.6e-49 197.6 142 72.5
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 2.5e-48 195.7 142 72.5
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 3.3e-48 195.3 138 68.1
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.4e-46 189.9 145 67.6
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 9.0e-46 187.2 130 70.0
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 2.0e-45 186.0 128 73.4
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 4.4e-45 184.9 123 78.9
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 7.6e-45 184.1 141 72.3
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 2.9e-44 182.2 111 81.1
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 6.4e-44 181.0 111 83.8
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 1.4e-43 179.9 111 81.1
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 3.2e-43 178.7 142 70.4
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 2.3e-41 172.6 111 76.6
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 2.3e-41 172.6 137 62.8
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 1.5e-40 169.9 137 64.2
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 2.8e-39 165.6 144 56.2
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 4.8e-39 164.9 147 63.3
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 2.4e-38 162.5 112 76.8
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 1.1e-35 153.7 112 70.5
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 1.1e-32 143.7 137 54.0
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 2.8e-31 139.0 89 80.9
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 1.8e-30 136.3 142 55.6
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 7.6e-29 131.0 84 79.8
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 3.5e-26 122.1 109 55.0
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.3e-23 113.6 77 77.9
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 1.8e-22 109.8 78 74.4
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 4.5e-21 105.1 96 58.3
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 1.0e-20 104.0 66 81.8
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 2.5e-16 89.4 55 76.4
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 6.3e-15 84.7 66 71.2
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 8.2e-15 84.3 49 81.6


User provided reference genes

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