Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 4.2e-170 601.3 308 100.0
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 7.1e-117 424.5 259 81.1
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 2.1e-116 422.9 239 85.4
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 6.0e-116 421.4 249 83.1
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 6.0e-116 421.4 249 83.1
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 7.8e-116 421.0 239 86.2
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.3e-115 420.2 239 85.4
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.7e-115 419.9 258 79.5
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 3.9e-115 418.7 238 84.9
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 3.9e-115 418.7 233 87.1
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.5e-114 416.8 238 84.5
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 1.5e-114 416.8 239 84.5
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 3.3e-114 415.6 239 84.1
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 3.3e-114 415.6 239 84.5
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 5.6e-114 414.8 255 80.4
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 5.6e-114 414.8 241 84.2
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 5.6e-114 414.8 255 80.4
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.6e-114 414.8 239 84.1
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 5.6e-114 414.8 239 84.5
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 7.3e-114 414.5 236 84.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 9.6e-114 414.1 239 84.9
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.2e-113 413.7 241 84.2
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 2.1e-113 412.9 229 86.5
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 2.8e-113 412.5 254 80.7
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.1e-113 411.0 227 87.2
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.1e-112 410.6 250 81.2
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.1e-112 410.6 259 79.9
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.4e-112 410.2 239 82.8
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 3.1e-112 409.1 229 86.5
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 3.1e-112 409.1 239 83.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 4.0e-112 408.7 242 83.1
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 4.0e-112 408.7 227 87.2
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 5.2e-112 408.3 248 81.5
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 5.2e-112 408.3 229 86.9
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 2.0e-111 406.4 237 84.8
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.0e-111 406.4 256 79.7
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.0e-111 406.4 227 87.7
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 2.0e-111 406.4 228 86.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 2.0e-111 406.4 227 86.8
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.0e-111 406.4 230 84.8
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 2.0e-111 406.4 227 86.8
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 5.8e-111 404.8 228 86.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 7.6e-111 404.4 234 85.0
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 7.6e-111 404.4 228 87.3
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 7.6e-111 404.4 228 87.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 9.9e-111 404.1 284 73.6
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 9.9e-111 404.1 276 74.3
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.7e-110 403.3 240 82.9
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.7e-110 403.3 229 84.3
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 2.2e-110 402.9 239 82.8
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.2e-110 402.9 239 82.0
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.9e-110 402.5 228 87.3
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 2.9e-110 402.5 241 82.2
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 6.4e-110 401.4 227 86.3
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.1e-109 400.6 227 86.3
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.9e-109 399.8 240 81.2
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.9e-109 399.8 255 80.0
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.9e-109 399.8 249 79.9
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.2e-109 399.1 259 77.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 3.2e-109 399.1 260 76.9
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 5.4e-109 398.3 227 85.9
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 9.3e-109 397.5 233 83.3
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 9.3e-109 397.5 239 81.2
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 9.3e-109 397.5 236 84.3
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 6.0e-108 394.8 229 83.4
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.0e-107 394.0 251 80.1
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 3.0e-107 392.5 227 84.6
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 3.9e-107 392.1 237 81.0
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 3.3e-106 389.0 256 76.2
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 3.3e-106 389.0 227 83.7
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 7.3e-106 387.9 278 72.3
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.3e-105 387.1 255 78.4
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.3e-105 387.1 226 82.7
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.6e-105 386.7 264 75.0
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.3e-104 381.7 295 68.1
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 1.2e-103 380.6 262 73.7
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.6e-103 379.4 239 78.7
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 7.6e-103 377.9 230 80.0
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.8e-102 375.6 262 72.9
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 6.4e-102 374.8 266 74.4
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 9.3e-101 370.9 212 85.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.9e-99 365.5 209 84.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 3.3e-98 362.5 237 75.9
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.3e-98 362.5 281 66.2
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.8e-94 349.0 219 77.2
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 4.9e-94 348.6 227 77.5
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.1e-92 343.2 228 72.8
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 6.0e-92 341.7 229 74.7
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 6.0e-92 341.7 230 72.6
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.3e-91 339.7 230 70.9
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 4.3e-90 335.5 227 76.7
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 6.2e-89 331.6 259 66.8
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 6.9e-88 328.2 245 69.0
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.5e-87 327.0 233 72.1
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.5e-87 327.0 229 68.6
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 7.6e-87 324.7 238 71.8
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 7.6e-87 324.7 234 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 2.1e-84 316.6 229 66.8
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 7.4e-82 308.1 340 52.4
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 4.1e-80 302.4 220 67.3
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.2e-79 300.8 172 84.3
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 5.9e-79 298.5 231 69.3
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 6.3e-73 278.5 226 61.5
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 2.0e-71 273.5 164 78.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.4e-67 260.8 204 66.2
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 5.7e-66 255.4 227 60.8
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.7e-65 253.8 175 72.6
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 7.0e-64 248.4 176 68.8
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.0e-62 244.6 157 79.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.7e-60 236.5 146 78.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 6.7e-59 231.9 139 82.0
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.1e-56 224.6 120 88.3
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.4e-56 224.2 223 54.3
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.8e-56 223.8 120 87.5
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 7.0e-48 195.3 410 34.6
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.7e-46 190.7 113 80.5
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.5e-42 177.6 104 83.7
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 2.9e-38 163.3 97 81.4
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.7e-31 140.2 78 85.9
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 6.6e-30 135.6 193 38.3
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 4.7e-28 129.4 66 89.4
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.4e-24 117.1 58 94.8
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 7.0e-24 115.5 56 96.4
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.0e-23 114.0 66 83.3
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.7e-23 113.6 63 84.1
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.3e-22 111.3 64 82.8
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 8.6e-22 108.6 70 71.4
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 1.5e-21 107.8 63 82.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.5e-21 107.8 211 29.9
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 2.8e-20 103.6 174 35.6
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 8.0e-20 102.1 66 75.8
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.2e-17 94.0 146 43.2
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 2.3e-11 73.9 43 81.4
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.0e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 7.8e-07 58.9 55 52.7
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 3.9e-06 56.6 110 32.7
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 5.1e-06 56.2 102 32.4
Aa31LG7G6950 Aethionema arabicum HOM05D005536 ORTHO05D006999 6.6e-06 55.8 90 34.4
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 6.6e-06 55.8 102 31.4
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 8.6e-06 55.5 111 30.6


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