Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 1.5e-89 333.2 214 100.0
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.8e-66 256.5 152 81.6
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 3.7e-64 248.8 152 80.9
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 4.8e-64 248.4 152 78.9
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.3e-61 240.4 152 78.3
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 6.5e-61 238.0 152 77.6
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.5e-60 236.9 152 75.7
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 2.5e-60 236.1 152 77.0
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 4.2e-60 235.3 151 78.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 9.4e-60 234.2 152 75.7
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 1.4e-58 230.3 164 71.3
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 1.8e-58 229.9 152 73.0
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.3e-58 229.6 152 74.3
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 2.3e-58 229.6 152 74.3
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 4.0e-58 228.8 149 76.5
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 6.8e-58 228.0 154 74.7
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 6.8e-58 228.0 152 72.4
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 6.8e-58 228.0 151 76.2
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 6.8e-58 228.0 152 75.0
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 8.8e-58 227.6 152 74.3
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 1.5e-57 226.9 152 73.0
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 1.5e-57 226.9 152 73.7
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 3.4e-57 225.7 152 72.4
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.4e-57 225.3 150 72.0
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 7.5e-57 224.6 152 70.4
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.7e-56 223.4 151 72.2
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.2e-56 223.0 153 73.2
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 2.8e-56 222.6 152 72.4
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 3.7e-56 222.2 152 72.4
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.7e-56 222.2 152 71.7
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 4.8e-56 221.9 152 71.7
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.8e-56 221.9 150 70.0
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 8.3e-56 221.1 152 70.4
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 8.3e-56 221.1 152 72.4
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 1.8e-55 219.9 157 72.0
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 2.4e-55 219.5 151 71.5
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 3.1e-55 219.2 156 69.9
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 3.1e-55 219.2 153 71.9
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 7.0e-55 218.0 152 69.1
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.2e-54 217.2 152 68.4
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 2.0e-54 216.5 152 71.1
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 3.5e-54 215.7 155 67.1
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 4.5e-54 215.3 155 69.0
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 5.9e-54 214.9 151 70.9
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.0e-53 214.2 151 69.5
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.0e-53 214.2 152 67.8
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 1.3e-53 213.8 153 69.3
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 1.3e-53 213.8 151 68.2
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 1.7e-53 213.4 152 68.4
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.7e-53 213.4 146 70.5
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 2.2e-53 213.0 154 68.8
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 3.8e-53 212.2 153 67.3
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 5.0e-53 211.8 150 68.7
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 8.5e-53 211.1 148 70.3
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 8.5e-53 211.1 152 67.8
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.1e-52 210.7 155 68.4
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 1.9e-52 209.9 152 69.1
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 2.5e-52 209.5 152 65.8
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 4.2e-52 208.8 168 63.1
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 5.5e-52 208.4 152 65.8
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 7.2e-52 208.0 155 67.1
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 2.1e-51 206.5 142 72.5
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 2.7e-51 206.1 152 65.1
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 2.7e-51 206.1 152 65.8
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 3.6e-51 205.7 148 66.9
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 3.6e-51 205.7 147 66.0
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 3.6e-51 205.7 153 67.3
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 1.4e-50 203.8 152 64.5
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.4e-50 203.8 152 65.8
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 1.8e-50 203.4 151 68.2
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.8e-50 203.4 151 66.2
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 2.3e-50 203.0 177 59.9
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 3.0e-50 202.6 150 65.3
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 4.0e-50 202.2 149 67.8
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 5.2e-50 201.8 152 66.4
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 6.8e-50 201.4 148 64.9
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 8.8e-50 201.1 152 63.8
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 1.5e-49 200.3 153 64.7
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 2.0e-49 199.9 152 65.8
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 3.4e-49 199.1 151 62.9
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 3.4e-49 199.1 145 66.9
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 4.4e-49 198.7 151 64.9
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 5.7e-49 198.4 153 64.7
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 5.7e-49 198.4 153 64.7
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 7.5e-49 198.0 151 63.6
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 9.8e-49 197.6 152 63.2
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 9.8e-49 197.6 152 63.8
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 1.7e-48 196.8 152 61.8
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.2e-48 196.4 152 65.1
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 2.8e-48 196.1 152 62.5
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 2.8e-48 196.1 150 63.3
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 3.7e-48 195.7 153 62.1
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 6.3e-48 194.9 151 64.2
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 6.3e-48 194.9 152 63.2
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 8.3e-48 194.5 157 61.1
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-47 194.1 153 62.7
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-47 194.1 152 63.8
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 1.1e-47 194.1 160 61.2
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 1.1e-47 194.1 153 62.7
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 1.1e-47 194.1 130 73.1
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.4e-47 193.7 152 65.1
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.4e-47 193.0 152 64.5
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 3.1e-47 192.6 153 62.7
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 3.1e-47 192.6 153 62.7
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 3.1e-47 192.6 153 62.7
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 3.1e-47 192.6 147 63.9
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 4.1e-47 192.2 152 64.5
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 5.4e-47 191.8 156 61.5
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 2.7e-46 189.5 151 63.6
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 3.5e-46 189.1 163 57.1
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 3.5e-46 189.1 152 63.2
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 5.9e-46 188.3 185 52.4
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.7e-45 186.8 152 63.8
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 2.3e-45 186.4 144 66.0
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 2.9e-45 186.0 149 62.4
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-45 186.0 160 58.8
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 3.8e-45 185.7 147 63.3
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 5.0e-45 185.3 165 59.4
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.6e-45 184.9 159 58.5
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 8.6e-45 184.5 157 59.2
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.1e-44 184.1 156 59.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 3.3e-44 182.6 152 61.2
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 5.6e-44 181.8 165 56.4
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 2.1e-43 179.9 160 56.9
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 3.6e-43 179.1 150 61.3
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.0e-42 177.6 145 60.0
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.0e-41 173.3 151 59.6
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 4.4e-41 172.2 151 58.9
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 5.7e-41 171.8 151 55.6
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 1.7e-40 170.2 157 55.4
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 2.2e-40 169.9 131 61.1
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 6.4e-40 168.3 154 59.7
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 9.2e-39 164.5 151 57.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 1.2e-38 164.1 106 75.5
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 2.0e-38 163.3 107 72.9
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.6e-37 157.9 142 56.3
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 1.0e-34 151.0 128 56.2
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 8.3e-32 141.4 148 50.0
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 2.4e-31 139.8 149 51.7
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 1.0e-29 134.4 109 63.3
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 3.7e-24 115.9 148 41.2
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 1.4e-23 114.0 73 75.3
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 2.5e-20 103.2 134 47.0
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 8.1e-19 98.2 112 53.6
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 1.8e-18 97.1 56 80.4
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 5.8e-17 92.0 62 64.5
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 8.4e-16 88.2 76 57.9
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 1.9e-15 87.0 55 70.9
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.6e-14 84.0 69 60.9
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 1.1e-12 77.8 51 68.6
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 6.4e-08 62.0 50 54.0
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.9e-07 60.5 50 56.0
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 1.9e-07 60.5 68 50.0
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 5.4e-07 58.9 73 39.7
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 5.4e-07 58.9 44 61.4
MCO03G325 Micromonas commoda HOM05D004719 ORTHO05D005519 7.8e-06 55.1 146 34.2


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