Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0005690 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.3e-134 482.3 243 100.0
Sc13g0005730 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.1e-88 330.5 239 70.7
Sc13g0005740 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.1e-59 232.6 242 55.0
Sc19g0000250 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.4e-35 154.1 244 41.4
Sc07g0006550 Simmondsia chinensis HOM05D000051 ORTHO05D000015 5.5e-32 142.1 242 39.7
Sc13g0005630 Simmondsia chinensis HOM05D000051 ORTHO05D000015 7.2e-32 141.7 242 41.3
Sc13g0005430 Simmondsia chinensis HOM05D000051 ORTHO05D000015 6.1e-31 138.7 245 38.8
Sc13g0005440 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.6e-29 133.3 245 37.6
Sc07g0006530 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.1e-27 126.3 241 34.9
Sc13g0005680 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.1e-27 126.3 243 37.0
Sc13g0005510 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.8e-25 119.4 245 37.1
Sc13g0005570 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.2e-23 114.4 248 37.5
Sc13g0005620 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.3e-22 110.2 247 35.6
AUR62020682 Chenopodium quinoa HOM05D000051 ORTHO05D000015 4.1e-19 99.4 255 32.2
Sc13g0005650 Simmondsia chinensis HOM05D000051 ORTHO05D000015 4.5e-18 95.9 250 33.6
AUR62028040 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.6e-15 86.3 255 29.0
AUR62020687 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.3e-14 83.6 263 29.3
AUR62036321 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.3e-14 83.6 255 30.6
AUR62009060 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.6e-13 80.1 254 30.3
Sc13g0005350 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.6e-13 80.1 148 37.2
AUR62028061 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.8e-13 79.0 256 31.2
AUR62044538 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.8e-13 79.0 256 31.2
AUR62020676 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.3e-12 77.8 257 31.5
AUR62020678 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.2e-12 77.0 259 28.2
Ah.13g072830 Amaranthus hybridus HOM05D000051 ORTHO05D000015 2.9e-12 76.6 251 28.3
AUR62020685 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.7e-12 76.3 253 27.7
AUR62020677 Chenopodium quinoa HOM05D000051 ORTHO05D000015 8.3e-12 75.1 259 27.8
Ah.13g072820 Amaranthus hybridus HOM05D000051 ORTHO05D000015 1.1e-11 74.7 255 29.0
Sc24g0001550 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.4e-11 74.3 163 37.4
AUR62038426 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-11 73.9 221 28.5
EL10Ac8g19263 Beta vulgaris HOM05D000051 ORTHO05D000015 1.2e-10 71.2 254 30.3
AUR62028057 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.0e-10 70.5 255 29.8
EL10Ac8g19262 Beta vulgaris HOM05D000051 ORTHO05D000015 7.8e-10 68.6 255 27.8
AUR62028056 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.0e-09 68.2 247 27.9
AUR62041875 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.0e-09 68.2 275 28.4
GSVIVG01038076001 Vitis vinifera HOM05D000051 ORTHO05D000015 1.0e-09 68.2 244 26.2
Aqoxy1G03331 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.3e-09 67.8 249 26.5
AUR62014044 Chenopodium quinoa HOM05D047215 ORTHO05D000015 1.7e-09 67.4 250 28.8
Dinv17489 Davidia involucrata HOM05D000051 ORTHO05D000015 2.3e-09 67.0 255 23.9
Duzib213G0573 Durio zibethinus HOM05D000051 ORTHO05D000015 2.3e-09 67.0 220 29.5
COL.COLO4_09415 Corchorus olitorius HOM05D000051 ORTHO05D000015 3.9e-09 66.2 262 27.5
Sc13g0005450 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.9e-09 66.2 71 52.1
AUR62044537 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.0e-09 65.9 266 28.2
Gohir.A02G008550 Gossypium hirsutum HOM05D000051 ORTHO05D000015 8.6e-09 65.1 239 29.7
Hund11311 Selenicereus undatus HOM05D000051 ORTHO05D000015 1.1e-08 64.7 225 30.7
Sc13g0005560 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.5e-08 64.3 82 43.9
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 2.5e-08 63.5 176 29.0
FAN25G2060 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.5e-08 63.5 259 25.5
Gorai.006G269100 Gossypium raimondii HOM05D000051 ORTHO05D000015 2.5e-08 63.5 236 27.1
AUR62010440 Chenopodium quinoa HOM05D033118 ORTHO05D000015 3.3e-08 63.2 256 23.4
Gohir.D02G008900 Gossypium hirsutum HOM05D000051 ORTHO05D000015 4.3e-08 62.8 241 29.0
Lsat_1_v5_gn_4_29041 Lactuca sativa HOM05D000051 ORTHO05D000015 4.3e-08 62.8 241 26.1
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 4.3e-08 62.8 260 26.9
COL.COLO4_16357 Corchorus olitorius HOM05D000051 ORTHO05D000015 5.6e-08 62.4 267 25.1
Ciclev10011664m.g Citrus clementina HOM05D000051 ORTHO05D000015 9.5e-08 61.6 256 26.6
Gohir.D02G008800 Gossypium hirsutum HOM05D000051 ORTHO05D000015 9.5e-08 61.6 240 29.6
Gorai.005G010500 Gossypium raimondii HOM05D000051 ORTHO05D000015 9.5e-08 61.6 240 29.2
AUR62028049 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.2e-07 61.2 134 32.1
SGA_v2.0_scaffold25G10773 Striga asiatica HOM05D000051 ORTHO05D000015 1.6e-07 60.8 258 26.0
Cc01_g01350 Coffea canephora HOM05D000051 ORTHO05D000015 2.1e-07 60.5 257 23.3
Gorai.005G010400 Gossypium raimondii HOM05D000051 ORTHO05D000015 2.1e-07 60.5 204 30.9
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 2.8e-07 60.1 247 24.7
EL10Ac5g12254 Beta vulgaris HOM05D033118 ORTHO05D000015 4.7e-07 59.3 208 28.4
Medtr6g045333 Medicago truncatula HOM05D000051 ORTHO05D000015 6.2e-07 58.9 254 25.2
Gohir.D02G008725 Gossypium hirsutum HOM05D000051 ORTHO05D000015 8.0e-07 58.5 204 29.9
AUR62028041 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.4e-06 57.8 99 32.3
Thecc.07G080700 Theobroma cacao HOM05D000051 ORTHO05D000015 1.4e-06 57.8 242 24.4
AT2G42730 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.3e-06 57.0 269 25.7
RcHm_v2.0_Chr4g0417391 Rosa chinensis HOM05D000051 ORTHO05D000015 2.3e-06 57.0 252 25.0
RcHm_v2.0_Chr4g0417401 Rosa chinensis HOM05D000051 ORTHO05D000015 2.3e-06 57.0 257 25.7
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 3.1e-06 56.6 245 25.7
Peaxi162Scf00853g00215 Petunia axillaris HOM05D000051 ORTHO05D011342 4.0e-06 56.2 208 26.0
HanXRQChr17g0564731 Helianthus annuus HOM05D000051 ORTHO05D000015 5.2e-06 55.8 241 23.7
AT1G66320 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.8e-06 55.5 230 24.8
Cfa000229 Carpinus fangiana HOM05D000051 ORTHO05D000015 6.8e-06 55.5 260 27.3
Phvul.008G129800 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 6.8e-06 55.5 220 26.4
QL05p062747 Quercus lobata HOM05D000051 ORTHO05D000015 6.8e-06 55.5 253 25.3
Migut.M00541 Erythranthe guttata HOM05D000051 ORTHO05D000015 8.9e-06 55.1 237 23.6


User provided reference genes

Program Settings