Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 4.9e-129 464.5 247 100.0
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 5.4e-35 152.1 236 40.7
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 7.1e-35 151.8 236 40.7
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.5e-32 144.1 240 41.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 1.5e-32 144.1 240 41.2
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.3e-32 142.9 227 42.3
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 5.6e-32 142.1 240 39.6
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 7.3e-32 141.7 238 40.8
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 9.6e-32 141.4 249 41.0
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 3.6e-31 139.4 245 39.2
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 3.6e-31 139.4 234 41.0
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 4.5e-29 132.5 243 37.9
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 7.6e-29 131.7 235 37.9
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.2e-28 130.2 226 39.8
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.9e-28 129.0 182 45.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 8.4e-28 128.3 231 40.3
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 3.2e-27 126.3 252 37.7
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 5.5e-27 125.6 224 37.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 9.3e-27 124.8 197 41.6
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 3.5e-26 122.9 248 36.3
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.5e-26 122.9 247 38.9
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 6.0e-26 122.1 235 36.6
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 7.9e-26 121.7 211 41.7
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 1.3e-25 120.9 221 41.2
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 2.3e-25 120.2 224 40.6
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 3.0e-25 119.8 241 36.9
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 5.1e-25 119.0 212 40.6
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 1.1e-24 117.9 188 42.6
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 1.9e-24 117.1 238 37.4
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 3.3e-24 116.3 236 37.7
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 4.3e-24 115.9 238 35.7
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 5.6e-24 115.5 214 39.3
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.6e-24 115.5 229 37.6
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 5.6e-24 115.5 245 38.0
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 9.6e-24 114.8 241 35.7
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 9.6e-24 114.8 200 42.0
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.6e-23 114.0 236 38.6
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.1e-23 113.6 237 38.8
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 3.7e-23 112.8 215 38.6
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.7e-23 112.8 229 37.1
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 4.8e-23 112.5 217 37.3
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 6.2e-23 112.1 195 39.5
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.1e-22 111.3 239 35.1
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 1.1e-22 111.3 193 40.4
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.8e-22 110.5 219 39.3
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.8e-22 110.5 242 36.8
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.4e-22 110.2 221 41.2
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.4e-22 110.2 221 41.2
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.4e-22 110.2 221 41.2
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 2.4e-22 110.2 215 38.6
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 2.4e-22 110.2 187 40.1
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 3.1e-22 109.8 195 42.1
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 3.1e-22 109.8 215 38.1
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 3.1e-22 109.8 184 39.7
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 4.0e-22 109.4 249 36.5
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 4.0e-22 109.4 235 35.3
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.3e-22 109.0 229 36.7
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 6.9e-22 108.6 222 37.8
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 9.0e-22 108.2 198 38.4
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 9.0e-22 108.2 198 38.4
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 9.0e-22 108.2 210 37.6
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 9.0e-22 108.2 248 33.1
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 1.2e-21 107.8 185 41.1
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.5e-21 107.5 240 35.8
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 2.0e-21 107.1 224 35.3
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.0e-21 107.1 222 35.1
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.0e-21 107.1 222 38.7
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 2.6e-21 106.7 219 38.8
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 2.6e-21 106.7 224 36.6
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 4.5e-21 105.9 234 35.9
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 7.6e-21 105.1 242 36.0
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.7e-20 104.0 221 36.2
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 1.7e-20 104.0 178 42.1
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 4.9e-20 102.4 200 37.0
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 6.5e-20 102.1 222 34.7
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 8.4e-20 101.7 200 38.5
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 1.4e-19 100.9 220 38.2
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.9e-19 100.5 218 34.4
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 5.5e-19 99.0 197 37.1
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 9.3e-19 98.2 152 42.8
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 9.3e-19 98.2 238 35.3
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 9.3e-19 98.2 218 33.9
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 2.1e-18 97.1 234 35.5
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.1e-18 97.1 191 36.1
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 2.1e-18 97.1 217 37.3
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 3.5e-18 96.3 182 35.2
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 4.6e-18 95.9 220 31.8
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 6.0e-18 95.5 194 35.1
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 7.9e-18 95.1 221 33.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 1.1e-16 91.3 239 33.9
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 5.7e-16 89.0 189 34.4
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 9.6e-16 88.2 98 49.0
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.6e-15 87.4 210 32.9
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 4.8e-15 85.9 143 40.6
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.8e-15 85.9 167 37.1
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 3.4e-13 79.7 92 48.9
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 7.2e-11 72.0 200 32.0
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 7.9e-10 68.6 162 30.2
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 8.7e-09 65.1 165 32.1
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 8.7e-09 65.1 166 28.9
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 4.3e-08 62.8 242 27.7
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.6e-07 60.8 163 32.5
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.6e-07 60.8 162 32.1


User provided reference genes

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