Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.3e-242 841.3 418 100.0
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.5e-207 726.1 359 100.0
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.4e-168 596.7 419 72.6
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.2e-167 593.6 419 72.3
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.6e-167 593.2 417 71.0
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 2.7e-167 592.4 422 71.3
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 4.5e-167 591.7 422 71.3
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 4.5e-167 591.7 422 71.3
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 5.0e-166 588.2 421 70.8
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.5e-165 586.6 422 71.1
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.6e-164 582.0 421 69.6
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 4.7e-164 581.6 419 69.2
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 1.8e-163 579.7 422 70.6
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 5.2e-163 578.2 425 70.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 6.8e-163 577.8 426 69.5
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 8.9e-163 577.4 419 69.9
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 1.2e-162 577.0 426 70.2
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 9.8e-162 573.9 421 69.6
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.3e-161 573.5 423 69.5
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 6.4e-161 571.2 423 68.8
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 8.3e-161 570.9 423 69.0
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 8.3e-161 570.9 423 68.8
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.4e-160 570.1 423 68.8
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.8e-160 569.7 425 69.6
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.4e-160 569.3 423 68.6
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.4e-160 569.3 423 68.8
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 5.4e-160 568.2 423 69.0
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 7.0e-160 567.8 423 68.8
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.6e-159 566.6 416 70.0
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.0e-159 566.2 423 69.5
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.7e-159 565.8 432 68.1
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.6e-159 565.1 421 69.1
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 4.6e-159 565.1 427 67.4
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 7.8e-159 564.3 423 69.3
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 6.6e-158 561.2 427 67.7
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.1e-157 560.5 436 64.9
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.5e-157 559.3 424 67.0
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.3e-157 558.9 425 68.5
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.8e-156 555.8 426 68.3
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 8.0e-156 554.3 424 65.3
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.0e-155 553.9 427 67.9
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 1.4e-155 553.5 420 68.8
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-155 553.5 446 65.9
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.3e-155 552.7 422 68.7
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 4.0e-155 552.0 418 68.9
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 5.2e-155 551.6 423 68.1
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.2e-154 550.4 430 67.2
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 2.0e-154 549.7 424 66.3
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.6e-154 549.3 425 65.6
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.6e-154 549.3 424 65.3
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 3.4e-154 548.9 426 65.7
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 6.4e-153 544.7 421 66.3
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 6.4e-153 544.7 421 66.5
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 8.3e-153 544.3 426 65.0
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.9e-152 543.1 424 64.6
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 4.1e-152 542.0 421 68.4
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 5.4e-152 541.6 420 64.5
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 2.7e-151 539.3 425 64.9
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.7e-150 536.6 424 64.6
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 3.0e-150 535.8 424 64.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 5.0e-150 535.0 420 65.2
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 6.6e-150 534.6 422 64.9
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 8.6e-150 534.3 424 64.2
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 8.6e-150 534.3 424 64.2
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 8.6e-150 534.3 424 64.2
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 7.3e-149 531.2 423 66.9
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 7.3e-149 531.2 421 64.6
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 7.3e-149 531.2 420 67.6
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 7.3e-149 531.2 420 67.6
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 9.5e-149 530.8 421 64.4
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.6e-148 530.0 425 64.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 2.8e-148 529.3 428 65.2
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 8.1e-148 527.7 420 67.1
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 6.8e-147 524.6 421 66.0
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.2e-146 523.9 432 63.7
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 3.4e-146 522.3 423 64.1
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 3.7e-145 518.8 424 65.3
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 3.5e-143 512.3 421 64.8
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.3e-142 509.6 418 62.7
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 6.6e-142 508.1 418 63.6
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 9.5e-141 504.2 419 63.7
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 4.0e-139 498.8 420 62.6
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 5.2e-139 498.4 406 65.3
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.8e-138 495.0 416 62.5
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 7.6e-138 494.6 415 65.1
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.7e-137 493.4 419 64.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.8e-137 492.3 420 64.0
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.9e-136 490.0 415 64.1
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.7e-135 486.1 388 66.2
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.0e-134 484.2 421 62.2
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 8.6e-134 481.1 413 63.2
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 5.8e-130 468.4 477 55.8
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 4.6e-127 458.8 419 60.1
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 3.0e-126 456.1 419 59.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.4e-114 416.0 419 56.1
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.4e-112 410.6 464 50.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 6.0e-111 405.2 255 80.8
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 8.4e-105 384.8 260 76.5
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 5.1e-102 375.6 255 75.3
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 8.5e-97 358.2 426 48.4
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.4e-96 357.5 466 44.0
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 6.7e-94 348.6 239 74.9
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.2e-92 341.7 307 60.6
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.2e-90 337.8 428 46.7
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.6e-90 336.7 467 44.3
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.9e-88 330.5 247 69.6
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.3e-73 281.2 447 40.0
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 3.2e-72 276.6 304 54.6
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 8.8e-62 241.9 184 70.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.2e-46 189.5 180 49.4
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.6e-34 151.4 489 27.4
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 5.6e-32 142.9 120 60.0
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.6e-31 141.4 158 49.4
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.8e-31 140.6 473 28.1
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 6.8e-30 136.0 494 23.7
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 3.7e-28 130.2 198 44.9
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.1e-26 124.4 107 56.1
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.4e-22 111.7 98 59.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 2.6e-21 107.5 70 74.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 2.4e-14 84.3 113 42.5


User provided reference genes

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