Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0007730 Simmondsia chinensis HOM05D024065 ORTHO05D026145 3.7e-312 1074.7 537 100.0
Sc18g0005800 Simmondsia chinensis HOM05D024065 ORTHO05D000898 2.1e-76 290.8 182 76.4
Sc01g0004780 Simmondsia chinensis HOM05D024065 ORTHO05D000898 1.2e-55 221.9 252 49.6
Sc12g0007680 Simmondsia chinensis HOM05D024065 ORTHO05D000898 3.8e-49 200.3 123 80.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 2.6e-21 107.8 219 28.8
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 9.7e-21 105.9 258 29.1
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.8e-20 104.4 298 26.8
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 8.2e-20 102.8 258 28.7
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 1.4e-19 102.1 254 24.8
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 4.1e-19 100.5 254 24.4
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 5.3e-19 100.1 254 24.4
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 7.0e-19 99.8 287 25.8
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.6e-18 98.6 270 24.1
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.0e-18 98.2 258 27.9
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.6e-18 97.8 296 25.3
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 3.5e-18 97.4 245 25.7
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 1.3e-17 95.5 241 24.1
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 1.3e-17 95.5 269 22.7
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 2.2e-17 94.7 267 26.2
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 2.9e-17 94.4 245 27.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 2.9e-17 94.4 223 26.0
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 3.8e-17 94.0 244 25.4
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 6.5e-17 93.2 244 25.8
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 8.5e-17 92.8 257 27.2
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 8.5e-17 92.8 286 24.8
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 1.1e-16 92.4 245 25.3
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 1.9e-16 91.7 245 24.9
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 2.5e-16 91.3 194 24.7
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 3.2e-16 90.9 258 24.8
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 3.2e-16 90.9 273 23.8
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 3.2e-16 90.9 270 24.4
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 4.2e-16 90.5 244 24.6
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 4.2e-16 90.5 254 22.8
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 5.5e-16 90.1 244 25.8
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.2e-16 89.7 281 25.6
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 7.2e-16 89.7 259 25.9
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 7.2e-16 89.7 254 22.4
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 7.2e-16 89.7 254 22.4
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 7.2e-16 89.7 254 22.8
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 7.2e-16 89.7 254 22.8
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 9.4e-16 89.4 246 25.2
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 2.1e-15 88.2 257 26.5
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 2.7e-15 87.8 241 22.4
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 2.7e-15 87.8 262 23.7
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 3.6e-15 87.4 223 25.1
FAN06G0315 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.1e-15 86.7 244 27.0
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.0e-14 85.9 194 23.7
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.0e-14 85.9 198 25.8
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.4e-14 85.5 256 23.4
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-14 85.5 205 25.4
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.8e-14 85.1 254 24.0
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 3.0e-14 84.3 281 25.3
FvH4_5g30680 Fragaria vesca HOM05D007993 ORTHO05D000898 3.0e-14 84.3 245 26.5
AUR62025505 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.2e-14 83.6 208 28.4
FAN06G1622 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.2e-14 83.6 245 25.7
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.2e-14 83.6 281 25.3
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.7e-14 83.2 281 24.9
RcHm_v2.0_Chr7g0204351 Rosa chinensis HOM05D007993 ORTHO05D000898 6.7e-14 83.2 241 24.9
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-13 82.4 208 27.9
FAN27G2070 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-13 82.4 214 25.2
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 2.6e-13 81.3 283 25.1
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 3.3e-13 80.9 227 25.1
Sc06g0004430 Simmondsia chinensis HOM05D024065 ORTHO05D030610 3.3e-13 80.9 68 55.9
Sc06g0004610 Simmondsia chinensis HOM05D025603 ORTHO05D026145 5.7e-13 80.1 78 56.4
FAN20G2401 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.5e-13 79.7 447 21.9
Sc01g0005560 Simmondsia chinensis HOM05D025603 ORTHO05D026145 9.7e-13 79.3 167 34.7
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 1.3e-12 79.0 187 24.6
Sc12g0007690 Simmondsia chinensis HOM05D025603 ORTHO05D026145 1.3e-12 79.0 78 56.4
FAN27G3022 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-12 78.6 194 29.9
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.3e-12 76.6 203 28.1
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 6.3e-12 76.6 222 27.0
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 8.2e-12 76.3 183 24.6
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 8.2e-12 76.3 203 28.1
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 8.2e-12 76.3 231 27.7
FvH4_1g25481 Fragaria vesca HOM05D004096 ORTHO05D010213 2.4e-11 74.7 305 22.6
Hma1.2p1_0381F.1_g139960 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 3.1e-11 74.3 204 22.5
AUR62014182 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.1e-11 73.9 220 26.8
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 9.1e-11 72.8 188 28.2
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 1.2e-10 72.4 305 22.3
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 2.0e-10 71.6 197 25.9
RcHm_v2.0_Chr6g0281911 Rosa chinensis HOM05D004096 ORTHO05D000898 2.0e-10 71.6 193 23.3
AUR62041478 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-10 71.2 229 23.1
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 2.7e-10 71.2 208 23.6
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 3.5e-10 70.9 195 27.7
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.7e-10 69.7 190 23.7
RcHm_v2.0_Chr3g0478081 Rosa chinensis HOM05D004096 ORTHO05D000898 7.7e-10 69.7 194 26.8
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 1.0e-09 69.3 223 26.0
COL.COLO4_13993 Corchorus olitorius HOM05D019362 ORTHO05D013856 2.9e-09 67.8 199 24.1
GSVIVG01014620001 Vitis vinifera HOM05D007651 ORTHO05D013864 2.9e-09 67.8 194 22.7
AUR62019536 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-09 67.4 182 26.9
FvH4_4g28760 Fragaria vesca HOM05D007993 ORTHO05D000898 3.8e-09 67.4 190 23.2
Dinv13142 Davidia involucrata HOM05D008396 ORTHO05D000898 6.5e-09 66.6 197 25.9
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.5e-09 66.6 190 22.6
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.5e-09 66.6 190 23.2
FAN06G1954 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.5e-09 66.2 155 25.2
FAN12G1044 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.5e-09 66.2 190 22.6
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.5e-09 66.2 190 22.6
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 8.5e-09 66.2 189 23.3
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 8.5e-09 66.2 218 21.6
FvH4_1g29141 Fragaria vesca HOM05D007993 ORTHO05D000898 1.1e-08 65.9 190 23.2
AUR62040774 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.5e-08 65.5 183 23.0
FAN21G3110 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.5e-08 65.5 189 22.8
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 1.5e-08 65.5 217 21.7
FAN04G2812 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-08 64.7 190 21.6
FAN10G0819 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.5e-08 64.7 189 23.3
FAN28G0955 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.5e-08 64.7 191 23.0
Atru.chr11.572 Acer truncatum HOM05D007651 ORTHO05D000898 3.2e-08 64.3 189 23.3
FAN09G4582 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-08 64.3 190 22.6
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.2e-08 64.3 189 22.8
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-08 64.3 209 22.0
AUR62042658 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.2e-08 63.9 182 26.9
FAN03G2392 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.2e-08 63.9 190 22.6
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62008556 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62027688 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62029947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-08 63.5 197 26.4
Rhsim08G0168100 Rhododendron simsii HOM05D007651 ORTHO05D002997 5.5e-08 63.5 115 27.8
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 5.5e-08 63.5 197 22.8
FAN08G3199 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.2e-08 63.2 189 22.8
FAN28G0502 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.4e-08 62.8 190 21.6
FAN12G2805 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.2e-07 62.4 209 22.0
AUR62000886 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.6e-07 62.0 191 22.5
AUR62039973 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-07 62.0 200 24.5
FvH4_7g03531 Fragaria vesca HOM05D007993 ORTHO05D000898 1.6e-07 62.0 199 24.1
Rhsim01G0153500 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.6e-07 62.0 76 34.2
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-07 61.6 199 25.1
AUR62035231 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-07 61.6 206 24.3
AUR62040453 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.1e-07 61.6 185 23.2
FvH4_5g33480 Fragaria vesca HOM05D004096 ORTHO05D046227 2.1e-07 61.6 188 25.5
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 2.1e-07 61.6 213 20.7
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 2.1e-07 61.6 213 20.7
Rhsim02G0161600 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.1e-07 61.6 168 25.0
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.7e-07 61.2 189 22.8
FAN13G3014 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.6e-07 60.8 189 22.2
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 4.7e-07 60.5 208 20.7
AUR62012395 Chenopodium quinoa HOM05D006463 ORTHO05D002997 6.1e-07 60.1 190 22.6
Ciclev10029867m.g Citrus clementina HOM05D007993 ORTHO05D000898 6.1e-07 60.1 158 24.1
Atru.chr13.1926 Acer truncatum HOM05D007651 ORTHO05D000898 8.0e-07 59.7 203 24.6
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 8.0e-07 59.7 192 21.4
AUR62006153 Chenopodium quinoa HOM05D006463 ORTHO05D002997 8.0e-07 59.7 186 24.7
FvH4_5g37871 Fragaria vesca HOM05D007993 ORTHO05D000898 8.0e-07 59.7 159 23.9
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-06 59.3 202 23.8
AUR62004909 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.4e-06 58.9 185 22.2
AUR62008971 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.4e-06 58.9 179 23.5
FAN03G1695 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.4e-06 58.9 185 23.2
Ah.05g176190 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-06 58.5 192 20.8
AUR62026604 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.8e-06 58.5 185 22.2
Dinv14218 Davidia involucrata HOM05D008396 ORTHO05D000898 1.8e-06 58.5 154 24.0
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 1.8e-06 58.5 164 25.6
Potri.010G214500 Populus trichocarpa HOM05D007651 ORTHO05D000898 1.8e-06 58.5 199 21.6
AUR62026206 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.3e-06 58.2 192 20.8
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 2.3e-06 58.2 153 26.8
Dinv13152 Davidia involucrata HOM05D008396 ORTHO05D000898 2.3e-06 58.2 153 26.8
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 3.0e-06 57.8 102 28.4
AUR62005367 Chenopodium quinoa HOM05D006463 ORTHO05D002997 4.0e-06 57.4 197 22.3
AUR62014151 Chenopodium quinoa HOM05D006463 ORTHO05D002997 5.2e-06 57.0 192 20.8
FAN27G2446 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.2e-06 57.0 184 22.3
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62020656 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
AUR62044062 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.8e-06 56.6 193 25.4
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 6.8e-06 56.6 153 26.1
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 6.8e-06 56.6 102 28.4
AUR62028449 Chenopodium quinoa HOM05D006463 ORTHO05D002997 8.8e-06 56.2 198 22.7
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.8e-06 56.2 193 25.4
Rhsim04G0060600 Rhododendron simsii HOM05D007651 ORTHO05D000898 8.8e-06 56.2 146 26.0


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