Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 3.4e-189 664.8 338 100.0
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 1.4e-28 131.3 257 38.1
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 4.4e-27 126.3 248 37.9
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 1.4e-25 121.3 125 53.6
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 5.3e-25 119.4 198 42.9
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 9.1e-25 118.6 229 38.4
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 2.0e-24 117.5 211 41.2
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 1.3e-23 114.8 156 43.6
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 2.9e-23 113.6 131 50.4
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 5.0e-23 112.8 231 38.5
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 5.0e-23 112.8 136 45.6
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 6.5e-23 112.5 144 47.2
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 1.1e-22 111.7 222 38.3
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 2.5e-22 110.5 143 44.1
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.5e-22 110.5 222 36.9
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 2.5e-22 110.5 231 37.2
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 3.2e-22 110.2 165 43.0
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 3.2e-22 110.2 168 44.0
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 9.4e-22 108.6 195 39.0
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 1.2e-21 108.2 124 50.8
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 1.2e-21 108.2 239 37.7
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 1.6e-21 107.8 201 38.8
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 2.7e-21 107.1 192 39.6
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 2.7e-21 107.1 343 32.7
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 3.6e-21 106.7 192 39.6
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 4.7e-21 106.3 223 37.7
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 4.7e-21 106.3 195 38.5
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 4.7e-21 106.3 214 36.4
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 6.1e-21 105.9 219 36.5
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 1.0e-20 105.1 205 38.0
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 1.0e-20 105.1 188 37.8
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.0e-20 105.1 188 37.8
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 1.8e-20 104.4 160 39.4
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 2.3e-20 104.0 211 35.5
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 2.3e-20 104.0 246 32.9
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 2.3e-20 104.0 190 37.9
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 2.3e-20 104.0 190 39.5
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 3.0e-20 103.6 125 44.0
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 4.0e-20 103.2 232 34.5
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.0e-19 100.9 250 34.4
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 2.6e-19 100.5 217 34.6
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 2.6e-19 100.5 116 45.7
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 3.4e-19 100.1 128 43.8
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 3.4e-19 100.1 128 43.8
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 7.5e-19 99.0 113 49.6
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 1.3e-18 98.2 203 37.9
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 1.7e-18 97.8 113 48.7
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 1.7e-18 97.8 192 34.4
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 2.8e-18 97.1 126 46.0
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 3.7e-18 96.7 126 46.8
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 4.8e-18 96.3 206 34.0
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 1.4e-17 94.7 123 44.7
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.4e-17 94.7 242 31.0
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 3.1e-17 93.6 180 38.3
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 4.1e-17 93.2 188 36.2
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 4.1e-17 93.2 110 44.5
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 7.0e-17 92.4 137 39.4
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 9.1e-17 92.0 192 36.5
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.2e-16 91.7 128 42.2
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 2.7e-16 90.5 145 41.4
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 3.5e-16 90.1 194 36.6
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 1.3e-15 88.2 294 30.6
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 2.9e-15 87.0 127 45.7
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 3.8e-15 86.7 161 41.6
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 6.5e-15 85.9 153 37.9
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 1.1e-14 85.1 181 33.1
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 2.5e-14 84.0 198 31.8
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 4.2e-14 83.2 113 38.9
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 7.2e-14 82.4 182 31.9
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 2.1e-13 80.9 181 33.1
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 2.1e-13 80.9 181 33.1
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 2.1e-13 80.9 181 33.1
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 2.8e-13 80.5 114 37.7
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 4.7e-13 79.7 193 34.2
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 1.0e-12 78.6 85 55.3
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 1.2e-11 75.1 144 34.7
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.5e-11 74.7 117 39.3
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 2.0e-11 74.3 83 47.0
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 2.6e-11 73.9 117 37.6
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 3.4e-11 73.6 179 30.7
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 4.4e-11 73.2 136 36.0
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 7.5e-11 72.4 179 30.7
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 2.2e-10 70.9 144 33.3
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 3.7e-10 70.1 144 34.0
Sp4g17100 Schrenkiella parvula HOM05D003734 ORTHO05D004270 7.0e-09 65.9 235 26.4
C03p22570 Brassica napus HOM05D003734 ORTHO05D004270 9.2e-09 65.5 145 32.4
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 9.2e-09 65.5 90 38.9
A03p19320 Brassica napus HOM05D003734 ORTHO05D004270 1.6e-08 64.7 145 29.7
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 2.0e-08 64.3 79 45.6
BcaC02g11564 Brassica carinata HOM05D003734 ORTHO05D004270 2.0e-08 64.3 136 33.1
A05p10840 Brassica napus HOM05D003734 ORTHO05D004270 2.0e-08 64.3 136 33.1
BolC3t14654H Brassica oleracea HOM05D003734 ORTHO05D004270 2.0e-08 64.3 137 31.4
BraA05t20029Z Brassica rapa HOM05D003734 ORTHO05D004270 2.0e-08 64.3 136 33.1
Thhalv10017751m.g Eutrema salsugineum HOM05D003734 ORTHO05D004270 2.0e-08 64.3 221 26.7
Cfa019641 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.7e-08 63.9 123 33.3
Migut.M01923 Erythranthe guttata HOM05D003734 ORTHO05D004270 2.7e-08 63.9 150 33.3
AL4G30800 Arabidopsis lyrata HOM05D003734 ORTHO05D004270 3.5e-08 63.5 165 29.1
SGA_v2.0_scaffold1G00292 Striga asiatica HOM05D003734 ORTHO05D004270 5.9e-08 62.8 216 28.2
C04p13940 Brassica napus HOM05D003734 ORTHO05D004270 7.8e-08 62.4 136 32.4
BolC4t22983H Brassica oleracea HOM05D003734 ORTHO05D004270 7.8e-08 62.4 136 32.4
FAN25G3016 Fragaria x ananassa HOM05D003734 ORTHO05D004270 1.3e-07 61.6 196 28.1
HPP92_007297 Vanilla planifolia HOM05D003734 ORTHO05D004270 1.3e-07 61.6 51 58.8
A04p26590 Brassica napus HOM05D003734 ORTHO05D004270 2.3e-07 60.8 170 28.8
C04p64010 Brassica napus HOM05D003734 ORTHO05D004270 2.3e-07 60.8 170 28.8
BraA03t11188Z Brassica rapa HOM05D003734 ORTHO05D004270 2.3e-07 60.8 139 31.7
FAN21G1749 Fragaria x ananassa HOM05D003734 ORTHO05D004270 2.3e-07 60.8 202 28.7
unitig_32.g10876 Utricularia gibba HOM05D003734 ORTHO05D004270 2.3e-07 60.8 95 41.1
Cfa021139 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.9e-07 60.5 123 30.1
Phvul.001G006100 Phaseolus vulgaris HOM05D003734 ORTHO05D004270 2.9e-07 60.5 216 26.9
HanXRQChr02g0033271 Helianthus annuus HOM05D003734 ORTHO05D004270 3.8e-07 60.1 61 50.8
RcHm_v2.0_Chr5g0018101 Rosa chinensis HOM05D003734 ORTHO05D004270 3.8e-07 60.1 139 36.7
FvH4_3g11190 Fragaria vesca HOM05D003734 ORTHO05D004270 5.0e-07 59.7 163 31.9
MD10G1243500 Malus domestica HOM05D003734 ORTHO05D004270 5.0e-07 59.7 120 38.3
AT2G34820 Arabidopsis thaliana HOM05D003734 ORTHO05D004270 6.6e-07 59.3 160 29.4
Prupe.4G100400 Prunus persica HOM05D003734 ORTHO05D004270 6.6e-07 59.3 51 54.9
MD05G1265500 Malus domestica HOM05D003734 ORTHO05D004270 8.6e-07 58.9 64 50.0
PGR042G0132 Punica granatum HOM05D007657 ORTHO05D009471 8.6e-07 58.9 67 52.2
Nitab4.5_0009906g0010 Nicotiana tabacum HOM05D003734 ORTHO05D004270 1.1e-06 58.5 66 45.5
Atru.chr1.975 Acer truncatum HOM05D003734 ORTHO05D004270 1.5e-06 58.2 103 35.0
ECA247G3303 Erigeron canadensis HOM05D000850 ORTHO05D000266 1.5e-06 58.2 87 35.6
Migut.H01308 Erythranthe guttata HOM05D003734 ORTHO05D004270 1.5e-06 58.2 100 36.0
Glyma.08G156000 Glycine max HOM05D000850 ORTHO05D000266 1.5e-06 58.2 62 48.4
Lsat_1_v5_gn_1_36620 Lactuca sativa HOM05D000850 ORTHO05D000266 1.5e-06 58.2 87 36.8
Aa31LG10G6480 Aethionema arabicum HOM05D003734 ORTHO05D004270 1.9e-06 57.8 133 30.1
BraA04t18164Z Brassica rapa HOM05D003734 ORTHO05D004270 1.9e-06 57.8 166 28.9
CARHR128980 Cardamine hirsuta HOM05D003734 ORTHO05D004270 1.9e-06 57.8 143 28.0
CDE07G1862 Ceratophyllum demersum HOM05D003734 ORTHO05D004270 1.9e-06 57.8 291 24.7
COL.COLO4_22896 Corchorus olitorius HOM05D003734 ORTHO05D004270 1.9e-06 57.8 105 35.2
Eucgr.D01630 Eucalyptus grandis HOM05D003734 ORTHO05D004270 1.9e-06 57.8 120 35.0
FAN16G0318 Fragaria x ananassa HOM05D003734 ORTHO05D004270 1.9e-06 57.8 202 27.7
Cfa022977 Carpinus fangiana HOM05D003734 ORTHO05D004270 2.5e-06 57.4 120 31.7
CDE03G0447 Ceratophyllum demersum HOM05D003734 ORTHO05D004270 2.5e-06 57.4 49 53.1
DCAR_026367 Daucus carota HOM05D000850 ORTHO05D000266 2.5e-06 57.4 58 46.6
Glyma.15G260500 Glycine max HOM05D003734 ORTHO05D004270 2.5e-06 57.4 124 33.9
Zm00001eb002350 Zea mays HOM05D003734 ORTHO05D004270 2.5e-06 57.4 112 33.9
Atru.chr1.1007 Acer truncatum HOM05D003734 ORTHO05D004270 3.3e-06 57.0 51 52.9
ATR0680G317 Amborella trichopoda HOM05D003734 ORTHO05D004270 3.3e-06 57.0 71 40.8
BcaB02g09505 Brassica carinata HOM05D003734 ORTHO05D004270 3.3e-06 57.0 136 30.9
Cpa.g.sc489.6 Carica papaya HOM05D003734 ORTHO05D004270 3.3e-06 57.0 228 27.6
HanXRQChr04g0095941 Helianthus annuus HOM05D000850 ORTHO05D000266 3.3e-06 57.0 101 34.7
SHI24799 Sapria himalayana HOM05D003734 ORTHO05D004270 3.3e-06 57.0 56 50.0
AT1G30670 Arabidopsis thaliana HOM05D003734 ORTHO05D004270 4.3e-06 56.6 228 24.6
CANSAT35G0546 Cannabis sativa HOM05D003734 ORTHO05D004270 4.3e-06 56.6 146 30.8
Ca_17646_v3 Cicer arietinum L. HOM05D000850 ORTHO05D000266 4.3e-06 56.6 58 50.0
Haze_07817 Corylus avellana HOM05D003734 ORTHO05D004270 4.3e-06 56.6 108 33.3
FvH4_3g14980 Fragaria vesca HOM05D003734 ORTHO05D004270 4.3e-06 56.6 99 37.4
Glyma.05G190600 Glycine max HOM05D000850 ORTHO05D000266 4.3e-06 56.6 61 47.5
Phvul.002G271000 Phaseolus vulgaris HOM05D000850 ORTHO05D000266 4.3e-06 56.6 62 46.8
VMungo0251G2518 Vigna mungo HOM05D000850 ORTHO05D000266 4.3e-06 56.6 62 46.8
SalBow3G3793 Salvia bowleyana HOM05D003734 ORTHO05D004270 5.6e-06 56.2 159 28.3
SEGI_09905 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 5.6e-06 56.2 161 30.4
TWI34G1793 Tripterygium wilfordii HOM05D003734 ORTHO05D004270 5.6e-06 56.2 136 29.4
AL1G44730 Arabidopsis lyrata HOM05D003734 ORTHO05D004270 7.3e-06 55.8 199 27.6
Psat7g046520 Pisum sativum HOM05D000850 ORTHO05D000266 7.3e-06 55.8 63 44.4
QL04p088510 Quercus lobata HOM05D003734 ORTHO05D004270 7.3e-06 55.8 70 45.7
QL04p088957 Quercus lobata HOM05D003734 ORTHO05D004270 7.3e-06 55.8 70 45.7
Sabra11G0142400 Salix brachista HOM05D003734 ORTHO05D004270 7.3e-06 55.8 228 27.2
Sc16g0004680 Simmondsia chinensis HOM05D000850 ORTHO05D000266 7.3e-06 55.8 74 44.6
Aqoxy7G03787 Aquilegia oxysepala HOM05D003734 ORTHO05D004270 9.5e-06 55.5 118 35.6
CiPaw.02G143300 Carya illinoinensis HOM05D000850 ORTHO05D000266 9.5e-06 55.5 51 49.0
CiPaw.02G143500 Carya illinoinensis HOM05D000850 ORTHO05D000266 9.5e-06 55.5 54 50.0
COL.COLO4_32255 Corchorus olitorius HOM05D000859 ORTHO05D000668 9.5e-06 55.5 163 29.4
DCAR_031419 Daucus carota HOM05D000850 ORTHO05D000266 9.5e-06 55.5 161 29.8
Duzib187G1153 Durio zibethinus HOM05D003734 ORTHO05D004270 9.5e-06 55.5 63 44.4
FAN25G0834 Fragaria x ananassa HOM05D003734 ORTHO05D004270 9.5e-06 55.5 122 33.6
Lalb_Chr13g0296551 Lupinus albus HOM05D000850 ORTHO05D000266 9.5e-06 55.5 58 48.3
PSO541G1280 Papaver somniferum HOM05D003734 ORTHO05D004270 9.5e-06 55.5 51 49.0
Peaxi162Scf00014g01814 Petunia axillaris HOM05D001080 ORTHO05D004270 9.5e-06 55.5 85 35.3
Potri.011G157700 Populus trichocarpa HOM05D003734 ORTHO05D004270 9.5e-06 55.5 200 28.5
Rhsim08G0230000 Rhododendron simsii HOM05D000850 ORTHO05D000266 9.5e-06 55.5 174 28.2
TPR.G37301 Trifolium pratense HOM05D000850 ORTHO05D000266 9.5e-06 55.5 58 48.3


User provided reference genes

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