Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 7.2e-161 570.5 276 100.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.6e-104 383.3 263 72.6
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 7.3e-97 357.8 270 68.9
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 9.5e-97 357.5 259 68.7
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 2.1e-96 356.3 273 68.9
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 2.8e-96 355.9 265 68.7
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 6.2e-96 354.8 258 69.8
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 8.1e-96 354.4 259 68.0
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.6e-94 349.4 277 67.1
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 2.6e-94 349.4 271 67.2
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 2.6e-94 349.4 267 66.7
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 3.4e-94 349.0 266 68.4
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 4.4e-94 348.6 260 66.5
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 7.5e-94 347.8 266 67.3
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 1.7e-93 346.7 224 74.6
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 2.2e-93 346.3 277 65.7
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.2e-93 346.3 259 67.2
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.9e-93 345.9 266 66.9
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 6.4e-93 344.7 208 77.4
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 8.3e-93 344.4 267 67.4
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 3.2e-92 342.4 272 65.8
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 4.1e-92 342.0 265 65.7
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 5.4e-92 341.7 255 68.2
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 5.4e-92 341.7 266 66.9
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 1.2e-91 340.5 270 66.7
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.7e-91 339.3 266 66.9
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 6.0e-91 338.2 252 68.7
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.3e-90 337.0 252 68.7
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 1.3e-90 337.0 210 74.8
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 1.3e-90 337.0 208 76.0
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 2.3e-90 336.3 276 64.5
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 3.0e-90 335.9 277 63.2
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 5.1e-90 335.1 232 73.3
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 5.1e-90 335.1 232 71.6
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 6.6e-90 334.7 279 63.4
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 8.6e-90 334.3 266 66.2
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 1.5e-89 333.6 262 66.0
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 2.5e-89 332.8 260 64.2
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 3.3e-89 332.4 267 64.8
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 4.3e-89 332.0 251 67.7
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 5.6e-89 331.6 259 68.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.6e-88 330.1 252 65.5
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 3.6e-88 328.9 227 71.4
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 4.7e-88 328.6 226 72.6
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 1.4e-87 327.0 261 67.0
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.0e-87 325.5 207 74.4
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.0e-87 325.5 207 74.4
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 5.2e-87 325.1 252 67.5
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.2e-86 323.9 218 70.6
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 2.0e-86 323.2 220 71.4
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 3.4e-86 322.4 221 71.9
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 3.4e-86 322.4 265 63.8
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 7.6e-86 321.2 230 67.4
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 9.9e-86 320.9 269 62.8
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-85 319.3 266 61.7
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-85 319.3 266 61.7
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 4.9e-85 318.5 215 69.8
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 6.4e-85 318.2 267 60.7
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 8.4e-85 317.8 245 66.1
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 4.1e-84 315.5 212 72.6
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.1e-83 313.2 224 69.2
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 4.6e-83 312.0 203 74.9
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.3e-82 310.5 198 74.2
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.7e-82 310.1 209 68.9
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 3.0e-82 309.3 214 68.7
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.1e-81 307.4 234 66.7
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 1.1e-81 307.4 201 71.1
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.9e-81 306.6 196 71.9
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 2.5e-81 306.2 196 71.9
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 3.3e-81 305.8 196 71.4
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.3e-81 305.8 252 65.1
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 1.2e-80 303.9 227 67.4
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.6e-80 303.5 209 70.3
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.1e-80 303.1 218 68.3
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 4.7e-80 302.0 214 65.9
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 8.1e-80 301.2 188 77.1
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.8e-79 300.1 188 76.6
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 9.0e-79 297.7 222 66.7
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 1.2e-78 297.4 211 68.2
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.3e-77 293.9 176 78.4
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 1.2e-75 287.3 175 76.6
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.7e-74 283.5 173 76.3
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.9e-73 280.0 329 49.8
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 5.6e-73 278.5 209 66.0
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.3e-72 277.3 262 59.2
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.6e-72 276.9 221 62.4
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 6.0e-67 258.5 157 74.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 3.9e-66 255.8 187 65.2
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.1e-64 250.0 210 61.0
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 5.3e-63 245.4 203 60.6
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 9.0e-63 244.6 248 54.0
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 3.8e-61 239.2 159 68.6
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.9e-58 229.2 244 50.0
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 2.5e-57 226.5 150 68.7
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 7.4e-57 224.9 170 64.1
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.6e-56 223.8 157 65.6
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 6.2e-56 221.9 251 51.0
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 1.6e-51 207.2 134 70.1
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.9e-49 200.3 234 49.6
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.4e-47 193.4 159 65.4
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.3e-47 192.2 157 65.0
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 2.6e-46 189.9 211 53.6
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 1.0e-45 188.0 114 76.3
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 5.0e-45 185.7 161 59.6
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.2e-43 181.0 187 50.8
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.0e-42 177.9 110 77.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 3.3e-41 172.9 111 72.1
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 4.8e-40 169.1 170 54.7
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 5.9e-38 162.2 104 74.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 2.9e-37 159.8 144 56.9
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 2.5e-36 156.8 107 69.2
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 2.5e-36 156.8 107 69.2
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 1.6e-35 154.1 93 77.4
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 6.7e-34 148.7 82 82.9
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 2.0e-33 147.1 81 82.7
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.3e-33 146.4 96 72.9
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 7.0e-31 138.7 135 60.0
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.6e-22 110.2 102 58.8
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.3e-21 107.8 112 52.7
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 3.6e-19 99.8 163 36.8


User provided reference genes

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