Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0009010 Simmondsia chinensis HOM05D000916 ORTHO05D009274 7.7e-92 340.5 176 100.0
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 7.5e-55 217.6 176 63.1
Dinv07424 Davidia involucrata HOM05D000916 ORTHO05D009274 2.1e-49 199.5 176 61.9
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 1.5e-47 193.4 174 62.1
EL10Ac2g04385 Beta vulgaris HOM05D000916 ORTHO05D009274 9.8e-47 190.7 174 58.0
Nn2g15166 Nelumbo nucifera HOM05D000916 ORTHO05D009274 2.9e-46 189.1 170 61.8
Manes.07G012200 Manihot esculenta HOM05D000916 ORTHO05D009274 1.4e-45 186.8 175 60.0
Aqoxy2G00212 Aquilegia oxysepala HOM05D000916 ORTHO05D009274 5.4e-45 184.9 168 55.4
arahy.Tifrunner.gnm1.ann1.W0KZJE Arachis hypogaea HOM05D000916 ORTHO05D009274 2.0e-44 183.0 166 57.8
THA.LOC104826696 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 6.0e-44 181.4 177 56.5
THA.LOC104826705 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 6.0e-44 181.4 177 56.5
Atru.chr11.2553 Acer truncatum HOM05D000916 ORTHO05D009274 7.8e-44 181.0 175 60.0
Lj3g0014758 Lotus japonicus HOM05D000916 ORTHO05D009274 3.9e-43 178.7 163 57.1
Actinidia06285 Actinidia chinensis HOM05D000916 ORTHO05D009274 5.0e-43 178.3 130 68.5
Prupe.2G025000 Prunus persica HOM05D000916 ORTHO05D009274 6.6e-43 177.9 171 59.1
PGR031G2328 Punica granatum HOM05D000916 ORTHO05D009274 8.6e-43 177.6 181 54.7
FAN03G1280 Fragaria x ananassa HOM05D000916 ORTHO05D009274 1.1e-42 177.2 172 58.1
Lsat_1_v5_gn_7_34400 Lactuca sativa HOM05D000916 ORTHO05D009274 1.5e-42 176.8 164 57.9
RcHm_v2.0_Chr1g0318771 Rosa chinensis HOM05D000916 ORTHO05D009274 1.5e-42 176.8 175 57.1
FvH4_7g01930 Fragaria vesca HOM05D000916 ORTHO05D009274 2.5e-42 176.0 172 57.6
FAN06G1234 Fragaria x ananassa HOM05D000916 ORTHO05D009274 2.5e-42 176.0 172 57.6
Potri.001G259216 Populus trichocarpa HOM05D000916 ORTHO05D009274 7.3e-42 174.5 132 65.2
Potri.001G259900 Populus trichocarpa HOM05D000916 ORTHO05D009274 7.3e-42 174.5 132 65.2
Medtr0003s0480 Medicago truncatula HOM05D000916 ORTHO05D009274 9.5e-42 174.1 165 55.8
TWI53G0499 Tripterygium wilfordii HOM05D000916 ORTHO05D009274 9.5e-42 174.1 170 56.5
TAR636G3509 Trochodendron aralioides HOM05D000916 ORTHO05D009274 1.2e-41 173.7 168 55.4
CSS0046245 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D009274 1.6e-41 173.3 129 68.2
Psat0s488g0040 Pisum sativum HOM05D000916 ORTHO05D009274 1.6e-41 173.3 173 57.2
CiPaw.14G004300 Carya illinoinensis HOM05D000916 ORTHO05D009274 3.6e-41 172.2 125 67.2
Lj9P642T24 Lonicera japonica HOM05D000916 ORTHO05D009274 3.6e-41 172.2 125 67.2
Phvul.011G013300 Phaseolus vulgaris HOM05D000916 ORTHO05D009274 3.6e-41 172.2 164 55.5
Potri.001G260600 Populus trichocarpa HOM05D000916 ORTHO05D009274 3.6e-41 172.2 123 68.3
Gohir.D08G065100 Gossypium hirsutum HOM05D000916 ORTHO05D009274 4.7e-41 171.8 171 56.7
THA.LOC104827433 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 4.7e-41 171.8 176 55.1
CsaV3_3G031830 Cucumis sativus L. HOM05D000916 ORTHO05D009274 6.2e-41 171.4 163 56.4
Gorai.004G067400 Gossypium raimondii HOM05D000916 ORTHO05D009274 1.4e-40 170.2 140 62.1
Rhsim07G0060200 Rhododendron simsii HOM05D000916 ORTHO05D009274 1.4e-40 170.2 125 68.0
Aa31LG9G13290 Aethionema arabicum HOM05D000916 ORTHO05D009274 4.0e-40 168.7 166 57.8
VMungo1127G0561 Vigna mungo HOM05D000916 ORTHO05D009274 4.0e-40 168.7 173 54.9
Cpa.g.sc197.27 Carica papaya HOM05D000916 ORTHO05D009274 5.2e-40 168.3 158 58.2
TAR636G0367 Trochodendron aralioides HOM05D000916 ORTHO05D009274 5.2e-40 168.3 141 60.3
MELO3C024009.2 Cucumis melo HOM05D000916 ORTHO05D009274 8.9e-40 167.5 171 54.4
DCAR_022368 Daucus carota HOM05D000916 ORTHO05D009274 8.9e-40 167.5 164 56.1
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 1.5e-39 166.8 151 55.6
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 2.0e-39 166.4 195 50.8
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 2.0e-39 166.4 173 52.6
CAN.G410.4 Capsicum annuum HOM05D000916 ORTHO05D009274 2.6e-39 166.0 133 63.2
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 3.4e-39 165.6 124 64.5
Thhalv10003279m.g Eutrema salsugineum HOM05D000916 ORTHO05D009274 9.9e-39 164.1 172 55.8
ClCG10G012070 Citrullus lanatus HOM05D000916 ORTHO05D009274 1.3e-38 163.7 160 55.0
Solyc01g088030.4 Solanum lycopersicum HOM05D000916 ORTHO05D009274 1.3e-38 163.7 158 56.3
GSVIVG01001443001 Vitis vinifera HOM05D000916 ORTHO05D009274 1.3e-38 163.7 126 66.7
Peaxi162Scf01108g00212 Petunia axillaris HOM05D000916 ORTHO05D009274 1.7e-38 163.3 172 53.5
PGSC0003DMG400006832 Solanum tuberosum HOM05D000916 ORTHO05D009274 1.7e-38 163.3 147 63.3
MSTRG.5047 Avicennia marina HOM05D000916 ORTHO05D009274 2.2e-38 162.9 176 53.4
Sopen01g034920 Solanum pennellii HOM05D000916 ORTHO05D009274 2.2e-38 162.9 166 53.6
Sed0025824 Sechium edule HOM05D000916 ORTHO05D009274 2.9e-38 162.5 154 55.2
Migut.N01806 Erythranthe guttata HOM05D000916 ORTHO05D009274 3.7e-38 162.2 179 50.3
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 6.4e-38 161.4 130 61.5
Rhsim07G0060800 Rhododendron simsii HOM05D000916 ORTHO05D009274 1.1e-37 160.6 206 48.5
vmacro13705 Vaccinium macrocarpon HOM05D000916 ORTHO05D009274 1.1e-37 160.6 177 52.0
FAN03G2260 Fragaria x ananassa HOM05D000916 ORTHO05D009274 1.4e-37 160.2 156 58.3
A02p27690 Brassica napus HOM05D000916 ORTHO05D009274 1.9e-37 159.8 171 52.6
BraA02t07808Z Brassica rapa HOM05D000916 ORTHO05D009274 1.9e-37 159.8 171 52.6
Sp2g08020 Schrenkiella parvula HOM05D000916 ORTHO05D009274 1.9e-37 159.8 167 53.9
HanXRQChr15g0480451 Helianthus annuus HOM05D000916 ORTHO05D009274 3.2e-37 159.1 161 53.4
AT5G43210 Arabidopsis thaliana HOM05D000916 ORTHO05D009274 9.2e-37 157.5 160 55.0
BcaB07g30592 Brassica carinata HOM05D000916 ORTHO05D009274 1.2e-36 157.1 175 52.0
Carub.0008s0547 Capsella rubella HOM05D000916 ORTHO05D009274 2.1e-36 156.4 147 56.5
Ciclev10032919m.g Citrus clementina HOM05D000916 ORTHO05D009274 2.7e-36 156.0 125 60.8
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 3.9e-35 152.1 126 60.3
Hma1.2p1_0579F.1_g182540 Hydrangea macrophylla HOM05D000916 ORTHO05D009274 6.6e-35 151.4 84 82.1
Glyma.09G226100 Glycine max HOM05D000916 ORTHO05D009274 1.5e-34 150.2 171 50.9
MBI11_g21817_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D009274 3.3e-34 149.1 134 58.2
AUR62009428 Chenopodium quinoa HOM05D000916 ORTHO05D009274 7.3e-34 147.9 105 65.7
SGA_v2.0_scaffold5G02941 Striga asiatica HOM05D000916 ORTHO05D009274 2.1e-33 146.4 128 57.8
Potri.001G260300 Populus trichocarpa HOM05D000916 ORTHO05D009274 3.6e-33 145.6 92 73.9
TAR636G0653 Trochodendron aralioides HOM05D000916 ORTHO05D009274 8.1e-33 144.4 126 59.5
CDE11G0804 Ceratophyllum demersum HOM05D000916 ORTHO05D009274 8.9e-32 141.0 125 56.8
Zm00001eb405020 Zea mays HOM05D000916 ORTHO05D009274 3.4e-31 139.0 120 57.5
Duzib133G0774 Durio zibethinus HOM05D000916 ORTHO05D009274 9.9e-31 137.5 164 50.6
ATR0782G182 Amborella trichopoda HOM05D000916 ORTHO05D009274 1.3e-30 137.1 168 47.0
CANSAT80G0736 Cannabis sativa HOM05D000916 ORTHO05D009274 2.2e-30 136.3 149 52.3
Os11g0146550 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 2.2e-30 136.3 172 47.1
Ah.16g100710 Amaranthus hybridus HOM05D000916 ORTHO05D009274 1.7e-27 126.7 173 42.8
Cfa010832 Carpinus fangiana HOM05D000916 ORTHO05D009274 3.0e-27 125.9 100 65.0
MD02G1299300 Malus domestica HOM05D000916 ORTHO05D009274 8.7e-27 124.4 98 62.2
RcHm_v2.0_Chr1g0318641 Rosa chinensis HOM05D000916 ORTHO05D009274 8.7e-27 124.4 118 59.3
Sabra16G0159300 Salix brachista HOM05D000916 ORTHO05D009274 5.6e-26 121.7 97 60.8
FAN01G3008 Fragaria x ananassa HOM05D000916 ORTHO05D009274 2.1e-25 119.8 109 61.5
Gohir.A08G055800 Gossypium hirsutum HOM05D000916 ORTHO05D009274 2.8e-25 119.4 171 43.9
Mapoly0059s0058 Marchantia polymorpha HOM05D000916 ORTHO05D009274 3.4e-23 112.5 121 45.5
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 9.9e-23 110.9 85 63.5
Lalb_Chr03g0024151 Lupinus albus HOM05D000916 ORTHO05D009274 1.7e-22 110.2 101 56.4
AL8G17370 Arabidopsis lyrata HOM05D000916 ORTHO05D009274 4.9e-22 108.6 81 66.7
Os12g0143300 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 5.1e-19 98.6 111 49.5
Haze_03122 Corylus avellana HOM05D000916 ORTHO05D009274 2.5e-18 96.3 95 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2289 Anthoceros agrestis HOM05D000916 ORTHO05D009274 1.1e-16 90.9 130 40.8
Atru.chr11.2549 Acer truncatum HOM05D000916 ORTHO05D009274 2.4e-16 89.7 50 82.0
AagrBONN_evm.TU.Sc2ySwM_117.2287 Anthoceros agrestis HOM05D000916 ORTHO05D009274 4.2e-13 79.0 70 57.1
Nitab4.5_0006695g0040 Nicotiana tabacum HOM05D000916 ORTHO05D009274 1.8e-11 73.6 154 37.0
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 3.7e-09 65.9 81 42.0
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 1.1e-08 64.3 112 33.9
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 3.1e-08 62.8 96 37.5
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 4.0e-08 62.4 101 34.7
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 5.3e-08 62.0 76 42.1
Mapoly0004s0007 Marchantia polymorpha HOM05D002376 ORTHO05D004654 1.2e-07 60.8 81 39.5
PRCOL_00003986 Prasinoderma coloniale HOM05D000916 ORTHO05D009274 1.5e-07 60.5 121 35.5
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 2.0e-07 60.1 75 38.7
Eucgr.J01841 Eucalyptus grandis HOM05D002376 ORTHO05D004654 4.5e-07 58.9 99 34.3
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 4.5e-07 58.9 84 36.9
Atru.chr1.2538 Acer truncatum HOM05D002376 ORTHO05D004654 5.8e-07 58.5 113 33.6
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 5.8e-07 58.5 81 38.3
Os07g0230500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D004654 5.8e-07 58.5 85 35.3
RcHm_v2.0_Chr1g0318631 Rosa chinensis HOM05D000916 ORTHO05D009274 5.8e-07 58.5 69 46.4
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 7.6e-07 58.2 81 35.8
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 7.6e-07 58.2 73 41.1
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 7.6e-07 58.2 81 37.0
TAR623G0587 Trochodendron aralioides HOM05D002376 ORTHO05D004654 7.6e-07 58.2 68 39.7
MSTRG.12701 Avicennia marina HOM05D002376 ORTHO05D004654 1.3e-06 57.4 124 30.6
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 1.3e-06 57.4 81 38.3
Glyma.18G054900 Glycine max HOM05D002376 ORTHO05D004654 1.3e-06 57.4 76 40.8
Oeu011367.1 Olea europaea HOM05D002376 ORTHO05D004654 1.3e-06 57.4 68 41.2
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 1.7e-06 57.0 81 38.3
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 1.7e-06 57.0 81 39.5
QL01p025227 Quercus lobata HOM05D002376 ORTHO05D004654 1.7e-06 57.0 78 38.5
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 1.7e-06 57.0 76 36.8
TPR.G24962 Trifolium pratense HOM05D002376 ORTHO05D004654 1.7e-06 57.0 81 39.5
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 2.2e-06 56.6 97 34.0
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 2.2e-06 56.6 76 38.2
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 2.2e-06 56.6 92 33.7
Sed0022472 Sechium edule HOM05D002376 ORTHO05D004654 2.2e-06 56.6 81 37.0
Aqoxy2G00731 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 2.9e-06 56.2 96 31.2
C04p59280 Brassica napus HOM05D002376 ORTHO05D004654 2.9e-06 56.2 76 36.8
BolC4t27433H Brassica oleracea HOM05D002376 ORTHO05D004654 2.9e-06 56.2 76 36.8
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 2.9e-06 56.2 81 39.5
Haze_24447 Corylus avellana HOM05D002376 ORTHO05D004654 2.9e-06 56.2 95 33.7
Dinv28716 Davidia involucrata HOM05D002376 ORTHO05D004654 2.9e-06 56.2 97 34.0
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 2.9e-06 56.2 76 38.2
Lj6g0027008 Lotus japonicus HOM05D002376 ORTHO05D004654 2.9e-06 56.2 81 39.5
Phvul.006G076300 Phaseolus vulgaris HOM05D002376 ORTHO05D004654 2.9e-06 56.2 76 39.5
Hund05050 Selenicereus undatus HOM05D002376 ORTHO05D004654 2.9e-06 56.2 123 28.5
TAR369G0569 Trochodendron aralioides HOM05D002376 ORTHO05D004654 2.9e-06 56.2 76 38.2
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea HOM05D002376 ORTHO05D004654 3.8e-06 55.8 81 39.5
BcaB06g28361 Brassica carinata HOM05D002376 ORTHO05D004654 3.8e-06 55.8 76 36.8
BcaC02g08025 Brassica carinata HOM05D002376 ORTHO05D004654 3.8e-06 55.8 76 36.8
ECA248G1568 Erigeron canadensis HOM05D002376 ORTHO05D004654 3.8e-06 55.8 76 39.5
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 3.8e-06 55.8 97 34.0
Lsat_1_v5_gn_5_175220 Lactuca sativa HOM05D002376 ORTHO05D004654 3.8e-06 55.8 126 30.2
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 3.8e-06 55.8 69 39.1
Actinidia11613 Actinidia chinensis HOM05D000055 ORTHO05D000057 4.9e-06 55.5 68 38.2
A04p23110 Brassica napus HOM05D002376 ORTHO05D004654 4.9e-06 55.5 76 36.8
BraA04t17841Z Brassica rapa HOM05D002376 ORTHO05D004654 4.9e-06 55.5 76 36.8
Cc01_g15150 Coffea canephora HOM05D002376 ORTHO05D004654 4.9e-06 55.5 103 35.0
Potri.019G127600 Populus trichocarpa HOM05D002376 ORTHO05D004654 4.9e-06 55.5 122 32.0
VMungo0540G1534 Vigna mungo HOM05D002376 ORTHO05D004654 4.9e-06 55.5 114 34.2
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 39.1
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 6.4e-06 55.1 104 35.6
BcaB01g04112 Brassica carinata HOM05D002376 ORTHO05D004654 6.4e-06 55.1 130 28.5
MELO3C020503.2 Cucumis melo HOM05D002376 ORTHO05D004654 6.4e-06 55.1 81 35.8
Migut.D00832 Erythranthe guttata HOM05D002376 ORTHO05D004654 6.4e-06 55.1 68 39.7
FvH4_3g40230 Fragaria vesca HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 40.6
FAN11G3581 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 40.6
FAN16G2868 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 40.6
FAN21G3096 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 40.6
FAN25G0776 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.4e-06 55.1 69 40.6
Sp4g12910 Schrenkiella parvula HOM05D002376 ORTHO05D004654 6.4e-06 55.1 76 36.8
SGA_v2.0_scaffold6G03299 Striga asiatica HOM05D002376 ORTHO05D004654 6.4e-06 55.1 100 35.0
TWI79G1034 Tripterygium wilfordii HOM05D002376 ORTHO05D004654 6.4e-06 55.1 68 36.8
Actinidia23178 Actinidia chinensis HOM05D002376 ORTHO05D004654 8.4e-06 54.7 103 34.0
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 8.4e-06 54.7 93 31.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 8.4e-06 54.7 93 31.2
Potri.013G155900 Populus trichocarpa HOM05D002376 ORTHO05D004654 8.4e-06 54.7 68 38.2
PRCOL_00000864 Prasinoderma coloniale HOM05D002376 ORTHO05D004654 8.4e-06 54.7 57 42.1
Sabra13G0125800 Salix brachista HOM05D002376 ORTHO05D004654 8.4e-06 54.7 115 31.3
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 8.4e-06 54.7 100 33.0
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 8.4e-06 54.7 97 33.0


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