Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 3.0e-117 426.8 657 100.0
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 3.7e-54 217.2 515 85.6
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 3.2e-50 204.1 525 86.7
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 3.2e-50 204.1 526 86.7
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 1.2e-49 202.2 524 82.1
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.0e-48 199.1 509 88.2
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 1.8e-48 198.4 508 85.0
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 2.3e-48 198.0 530 67.9
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 7.4e-47 193.0 521 81.6
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 4.8e-46 190.3 504 88.7
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.4e-45 188.7 517 82.0
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 1.2e-44 185.7 504 87.7
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 3.4e-44 184.1 494 89.7
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 5.9e-44 183.3 540 78.0
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 7.7e-44 183.0 516 85.9
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.0e-43 182.6 485 85.2
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 3.8e-43 180.6 485 84.3
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 8.5e-43 179.5 508 84.6
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 1.1e-42 179.1 510 81.6
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 4.2e-42 177.2 495 83.8
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 7.2e-42 176.4 558 75.6
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 1.6e-41 175.3 507 68.4
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 2.1e-41 174.9 127 70.1
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 4.6e-41 173.7 498 83.1
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.0e-40 172.6 480 85.2
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.0e-40 172.6 480 85.2
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 1.0e-40 172.6 486 83.5
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.0e-40 172.6 500 82.0
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 1.4e-40 172.2 173 54.9
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.8e-40 171.8 500 84.6
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 2.3e-40 171.4 553 78.5
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 5.1e-40 170.2 565 70.1
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 6.7e-40 169.9 559 76.6
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 1.1e-39 169.1 487 84.0
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 1.5e-39 168.7 485 83.3
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.0e-39 168.3 561 79.5
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 4.3e-39 167.2 130 63.8
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 1.7e-38 165.2 114 71.1
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.8e-38 164.5 561 79.1
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 3.7e-38 164.1 544 82.5
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 3.7e-38 164.1 478 83.9
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 6.3e-38 163.3 155 58.1
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 6.3e-38 163.3 552 70.3
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 1.1e-37 162.5 524 83.4
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 1.1e-37 162.5 140 60.7
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 1.4e-37 162.2 467 29.1
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.3e-37 160.2 547 80.4
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.3e-37 160.2 547 80.4
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 6.9e-37 159.8 547 80.3
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 9.1e-37 159.5 166 54.2
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 1.2e-36 159.1 148 54.7
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.5e-36 158.7 133 59.4
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.6e-36 157.9 129 63.6
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 3.4e-36 157.5 493 87.6
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 5.9e-36 156.8 518 84.4
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 5.9e-36 156.8 484 88.4
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 1.0e-35 156.0 101 74.3
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 1.7e-35 155.2 520 83.3
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 1.7e-35 155.2 125 64.0
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 2.2e-35 154.8 157 52.9
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 2.9e-35 154.5 500 86.2
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 5.0e-35 153.7 147 57.8
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 5.0e-35 153.7 147 57.8
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 5.0e-35 153.7 576 70.3
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.1e-34 152.5 175 52.0
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 1.4e-34 152.1 109 68.8
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 1.4e-34 152.1 177 52.0
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.9e-34 151.8 163 54.0
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.9e-34 151.8 163 54.0
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.9e-34 151.8 163 54.0
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 1.9e-34 151.8 484 88.0
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 2.5e-34 151.4 493 87.2
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 2.5e-34 151.4 140 57.9
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 3.2e-34 151.0 126 61.9
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 4.2e-34 150.6 145 53.1
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 5.5e-34 150.2 162 51.9
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 5.5e-34 150.2 132 61.4
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 9.4e-34 149.4 169 52.7
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 2.7e-33 147.9 110 67.3
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 4.7e-33 147.1 105 63.8
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 6.1e-33 146.7 169 52.1
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 6.1e-33 146.7 485 86.8
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 1.4e-32 145.6 128 57.8
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.3e-32 144.8 178 47.2
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 2.0e-31 141.7 105 62.9
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 2.0e-31 141.7 105 62.9
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 4.4e-31 140.6 78 83.3
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 3.1e-29 134.4 76 81.6
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 4.5e-28 130.6 77 75.3
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 1.0e-27 129.4 84 71.4
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 2.5e-26 124.8 161 46.0
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 9.4e-26 122.9 67 83.6
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.5e-23 115.5 91 58.2
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 8.5e-19 99.8 96 51.0
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.5e-19 99.8 135 38.5
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.5e-19 99.8 135 38.5
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 8.5e-19 99.8 83 54.2
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 1.5e-18 99.0 125 44.0
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 4.0e-16 90.9 69 56.5
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.5e-15 89.0 81 48.1
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 3.3e-15 87.8 53 75.5
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.7e-14 85.5 80 60.0
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 2.0e-12 78.6 56 64.3
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 6.5e-11 73.6 40 82.5
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 4.0e-08 64.3 47 70.2
FAN02G2590 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.4e-07 60.8 35 80.0
CANSAT78G2316 Cannabis sativa HOM05D002479 ORTHO05D002675 9.8e-07 59.7 83 30.1
RcHm_v2.0_Chr4g0388991 Rosa chinensis HOM05D002479 ORTHO05D002675 1.7e-06 58.9 90 33.3
CSS0026566 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 6.3e-06 57.0 82 30.5
CSS0032076 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 6.3e-06 57.0 82 30.5


User provided reference genes

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