Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000190 Simmondsia chinensis HOM05D006285 ORTHO05D007249 1.1e-90 336.7 170 100.0
Sc04g0010480 Simmondsia chinensis HOM05D006285 ORTHO05D007249 1.5e-20 103.6 139 50.4
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 2.0e-20 103.2 159 43.4
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 2.9e-19 99.4 149 45.6
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 2.9e-19 99.4 149 45.6
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 4.9e-19 98.6 145 44.8
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 8.4e-19 97.8 165 44.2
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 8.4e-19 97.8 165 44.2
Cpa.g.sc207.10 Carica papaya HOM05D006285 ORTHO05D007249 1.1e-18 97.4 170 39.4
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 1.1e-18 97.4 171 39.2
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 1.9e-18 96.7 159 41.5
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 3.2e-18 95.9 169 40.8
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 4.2e-18 95.5 169 41.4
Oeu019430.1 Olea europaea HOM05D006285 ORTHO05D007249 7.1e-18 94.7 157 42.0
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 9.3e-18 94.4 165 40.0
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 1.2e-17 94.0 157 42.0
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 1.6e-17 93.6 152 42.8
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 1.6e-17 93.6 167 41.9
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.5e-17 92.4 170 41.2
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 4.6e-17 92.0 166 42.8
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 4.6e-17 92.0 146 43.8
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 6.0e-17 91.7 130 44.6
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 6.0e-17 91.7 153 41.8
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 6.0e-17 91.7 167 44.9
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 7.8e-17 91.3 179 40.2
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 7.8e-17 91.3 170 41.8
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 7.8e-17 91.3 170 41.2
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 7.8e-17 91.3 126 44.4
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 1.0e-16 90.9 170 37.1
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 1.3e-16 90.5 151 41.7
Manes.08G102800 Manihot esculenta HOM05D006285 ORTHO05D007249 1.3e-16 90.5 169 40.2
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 3.0e-16 89.4 123 47.2
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 5.1e-16 88.6 134 45.5
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 5.1e-16 88.6 134 41.8
Nn3g16318 Nelumbo nucifera HOM05D006285 ORTHO05D007249 5.1e-16 88.6 171 38.6
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 1.1e-15 87.4 152 42.1
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 1.5e-15 87.0 159 41.5
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.5e-15 86.3 154 39.6
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 2.5e-15 86.3 166 38.0
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 3.3e-15 85.9 129 45.0
Ah.03g135710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.3e-15 85.5 172 37.8
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 5.6e-15 85.1 134 44.0
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 5.6e-15 85.1 169 40.2
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 5.6e-15 85.1 165 36.4
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 9.6e-15 84.3 159 40.3
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 2.1e-14 83.2 148 37.8
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 3.6e-14 82.4 141 41.1
Gohir.A01G021000 Gossypium hirsutum HOM05D006285 ORTHO05D007249 6.2e-14 81.6 139 44.6
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 6.2e-14 81.6 187 38.0
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 6.2e-14 81.6 160 36.9
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 6.2e-14 81.6 144 41.7
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 8.1e-14 81.3 131 41.2
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 8.1e-14 81.3 136 39.7
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 8.1e-14 81.3 167 37.1
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 1.1e-13 80.9 145 40.0
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 1.4e-13 80.5 134 43.3
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 1.4e-13 80.5 134 43.3
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 1.4e-13 80.5 189 33.3
BcaNung01167 Brassica carinata HOM05D006285 ORTHO05D007249 1.8e-13 80.1 129 40.3
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 1.8e-13 80.1 179 34.6
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 1.8e-13 80.1 155 38.7
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 1.8e-13 80.1 188 35.6
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 1.8e-13 80.1 132 44.7
TWI36G1029 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 1.8e-13 80.1 176 39.8
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 4.0e-13 79.0 132 37.9
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 4.0e-13 79.0 132 37.9
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 5.3e-13 78.6 136 39.0
CARHR200230 Cardamine hirsuta HOM05D006285 ORTHO05D007249 5.3e-13 78.6 129 41.9
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 6.9e-13 78.2 139 42.4
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 9.0e-13 77.8 169 37.3
SalBow2G0692 Salvia bowleyana HOM05D006285 ORTHO05D007249 9.0e-13 77.8 121 46.3
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 9.0e-13 77.8 158 35.4
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 1.2e-12 77.4 162 38.3
Migut.K01038 Erythranthe guttata HOM05D006285 ORTHO05D007249 1.2e-12 77.4 145 37.2
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 1.2e-12 77.4 143 42.7
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 1.5e-12 77.0 149 37.6
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 1.5e-12 77.0 164 37.2
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 2.0e-12 76.6 133 40.6
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 2.6e-12 76.3 153 36.6
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 3.4e-12 75.9 132 37.1
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 3.4e-12 75.9 132 37.1
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 3.4e-12 75.9 141 38.3
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 4.5e-12 75.5 133 39.1
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 4.5e-12 75.5 133 39.8
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 4.5e-12 75.5 168 36.9
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 4.5e-12 75.5 171 33.9
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 5.8e-12 75.1 133 39.8
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 9.9e-12 74.3 133 39.8
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 9.9e-12 74.3 133 39.8
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 1.3e-11 73.9 166 36.1
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 1.1e-10 70.9 151 38.4
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 1.1e-10 70.9 113 41.6
Nn4g22189 Nelumbo nucifera HOM05D006285 ORTHO05D007249 1.4e-10 70.5 138 35.5
Oeu055473.1 Olea europaea HOM05D006285 ORTHO05D007249 3.2e-10 69.3 130 36.9
CDE02G4729 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 4.2e-10 68.9 135 37.8
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 5.4e-10 68.6 148 35.8
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 6.0e-09 65.1 132 35.6
AUR62028862 Chenopodium quinoa HOM05D006285 ORTHO05D007249 1.3e-08 63.9 93 44.1
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 2.3e-08 63.2 118 36.4
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 5.1e-08 62.0 120 36.7
vmacro16080 Vaccinium macrocarpon HOM05D006285 ORTHO05D007249 5.1e-08 62.0 103 38.8
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 1.1e-07 60.8 127 35.4
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 1.9e-07 60.1 128 35.9
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 2.5e-07 59.7 116 33.6
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 7.4e-07 58.2 119 36.1
HanXRQChr08g0210081 Helianthus annuus HOM05D006285 ORTHO05D007249 2.8e-06 56.2 88 43.2
MBI07_g36277_MAGBIO Magnolia biondii HOM05D006285 ORTHO05D007249 3.7e-06 55.8 56 53.6


User provided reference genes

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