Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 4.3e-84 314.7 166 100.0
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 5.7e-28 128.3 166 50.0
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 7.4e-28 127.9 166 50.0
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 3.4e-25 119.0 166 48.2
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 3.8e-24 115.5 169 50.3
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 3.3e-20 102.4 149 47.0
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 4.8e-19 98.6 165 44.8
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 4.8e-19 98.6 165 44.8
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 1.4e-18 97.1 167 41.3
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 2.4e-18 96.3 157 45.2
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 5.9e-17 91.7 158 41.1
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.4e-15 87.0 151 42.4
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 1.9e-15 86.7 160 40.6
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 7.2e-15 84.7 169 42.6
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 9.4e-15 84.3 159 40.9
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 9.4e-15 84.3 160 40.0
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 2.7e-14 82.8 158 41.8
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.7e-14 82.8 156 42.3
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 4.6e-14 82.0 169 42.0
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 4.6e-14 82.0 156 41.7
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 3.0e-13 79.3 147 38.1
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 3.9e-13 79.0 186 38.7
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 8.8e-13 77.8 190 37.4
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.1e-12 77.4 181 37.0
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 1.1e-12 77.4 167 40.1
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.0e-12 76.6 156 37.2
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 4.3e-12 75.5 148 39.9
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 9.7e-12 74.3 161 40.4
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 9.7e-12 74.3 99 46.5
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.7e-11 73.6 164 39.0
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.8e-11 72.0 148 38.5
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 4.8e-11 72.0 167 38.3
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 6.3e-11 71.6 156 36.5
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 8.2e-11 71.2 156 38.5
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.1e-10 70.9 74 55.4
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 1.1e-10 70.9 159 37.7
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.1e-10 70.9 156 38.5
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 9.1e-10 67.8 181 37.0
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 5.9e-09 65.1 149 38.9
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 1.0e-08 64.3 167 32.9
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 1.7e-08 63.5 155 32.9
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 1.7e-08 63.5 159 34.0
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.9e-08 62.8 99 41.4
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 3.8e-08 62.4 130 38.5
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 3.8e-08 62.4 70 50.0
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 5.0e-08 62.0 150 36.7
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 5.0e-08 62.0 167 35.3
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 6.5e-08 61.6 176 36.9
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 8.5e-08 61.2 154 32.5
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 8.5e-08 61.2 102 42.2
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 8.5e-08 61.2 102 42.2
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 8.5e-08 61.2 163 34.4
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.5e-07 59.7 68 50.0
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 3.2e-07 59.3 87 42.5
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 4.2e-07 58.9 87 46.0
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 4.2e-07 58.9 74 48.6
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 5.5e-07 58.5 69 52.2
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.2e-06 57.4 109 36.7
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.6e-06 57.0 117 35.9
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 1.6e-06 57.0 145 35.9
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 1.6e-06 57.0 73 50.7
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 1.6e-06 57.0 166 37.3
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 1.6e-06 57.0 66 54.5
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 2.1e-06 56.6 72 51.4
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 2.1e-06 56.6 74 47.3
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 2.1e-06 56.6 93 41.9
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 2.1e-06 56.6 86 45.3
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 2.7e-06 56.2 73 45.2
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 3.6e-06 55.8 77 46.8
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 4.7e-06 55.5 86 40.7
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 6.1e-06 55.1 114 33.3
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 7.9e-06 54.7 80 43.8


User provided reference genes

Program Settings