Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 3.5e-153 545.0 302 100.0
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.4e-72 277.3 279 57.0
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 1.5e-71 273.9 285 62.8
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.7e-67 260.4 272 55.1
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 8.6e-67 258.1 287 51.9
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.6e-65 253.8 276 58.0
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.8e-65 253.1 291 57.7
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 4.7e-65 252.3 263 57.0
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.1e-64 251.1 281 51.6
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.8e-64 250.4 293 56.7
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 2.3e-64 250.0 279 55.6
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 3.1e-64 249.6 267 59.2
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 4.0e-64 249.2 282 59.2
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 4.0e-64 249.2 282 59.2
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 4.0e-64 249.2 262 55.7
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 5.2e-64 248.8 276 55.1
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 6.8e-64 248.4 285 55.1
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 6.8e-64 248.4 278 57.2
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.5e-63 247.3 265 54.3
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 2.0e-63 246.9 280 57.9
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 2.6e-63 246.5 307 55.4
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 4.4e-63 245.7 268 54.9
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.8e-63 245.4 306 54.9
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.9e-62 243.0 263 57.4
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 4.9e-62 242.3 268 51.9
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 2.4e-61 240.0 266 59.4
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 3.2e-61 239.6 273 50.2
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 3.2e-61 239.6 270 53.3
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 3.2e-61 239.6 268 57.5
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 5.4e-61 238.8 275 57.5
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 9.2e-61 238.0 279 54.1
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 4.6e-60 235.7 269 56.1
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 1.0e-59 234.6 268 57.1
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.3e-59 234.2 278 56.1
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.3e-59 234.2 297 53.9
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 2.3e-59 233.4 280 56.8
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.9e-59 232.6 287 53.3
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 3.9e-59 232.6 277 55.6
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 6.6e-59 231.9 260 53.8
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.6e-59 231.5 265 56.2
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 8.6e-59 231.5 289 54.0
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.1e-58 231.1 301 48.5
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 2.5e-58 229.9 272 50.4
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 4.3e-58 229.2 289 53.6
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 5.6e-58 228.8 277 51.6
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 7.3e-58 228.4 284 55.6
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.2e-57 227.6 271 53.1
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 2.8e-57 226.5 274 55.5
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 8.1e-57 224.9 278 46.4
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 1.4e-56 224.2 266 54.9
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.8e-56 223.8 268 52.6
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 3.1e-56 223.0 278 55.8
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 3.1e-56 223.0 268 57.1
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 4.0e-56 222.6 285 54.7
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 6.8e-56 221.9 287 53.7
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.0e-55 220.3 275 54.5
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 2.6e-55 219.9 273 54.6
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 4.4e-55 219.2 268 54.1
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.8e-55 218.8 286 54.5
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 7.6e-55 218.4 272 47.8
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.7e-54 216.1 283 52.3
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 4.9e-54 215.7 267 55.1
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 4.9e-54 215.7 265 55.8
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 6.4e-54 215.3 291 46.7
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 8.4e-54 214.9 272 55.1
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.4e-53 214.2 265 54.0
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.9e-53 213.8 271 51.7
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.2e-53 213.0 273 52.0
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 5.4e-53 212.2 267 54.7
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 7.1e-53 211.8 266 55.3
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 7.1e-53 211.8 283 47.0
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 7.1e-53 211.8 267 49.8
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 9.2e-53 211.5 263 55.5
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 9.2e-53 211.5 273 53.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.2e-52 211.1 264 48.9
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 3.5e-52 209.5 263 54.4
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 6.0e-52 208.8 263 55.1
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 6.0e-52 208.8 290 45.5
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.3e-51 207.6 284 54.2
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 2.3e-51 206.8 283 50.2
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 3.0e-51 206.5 236 49.6
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 5.1e-51 205.7 268 54.1
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 6.6e-51 205.3 280 45.4
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 8.6e-51 204.9 276 45.7
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.5e-50 204.1 268 46.3
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 4.3e-50 202.6 278 44.6
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 7.3e-50 201.8 269 46.8
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.2e-49 201.1 269 45.7
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.8e-49 199.9 316 45.3
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 8.1e-49 198.4 229 54.1
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 8.1e-49 198.4 175 60.0
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 2.4e-48 196.8 280 46.4
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.2e-48 195.7 248 56.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.9e-46 189.9 270 46.3
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 4.2e-45 186.0 153 62.7
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 7.8e-44 181.8 159 58.5
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 5.1e-43 179.1 227 55.5
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 3.3e-42 176.4 166 58.4
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 1.3e-38 164.5 258 48.8
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 7.1e-37 158.7 237 50.2
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.3e-34 149.4 150 55.3
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.4e-30 135.6 122 58.2
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.7e-28 130.2 288 37.2
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 2.4e-24 117.1 289 37.4
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 4.0e-24 116.3 253 37.9
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 5.5e-21 105.9 113 49.6
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 4.8e-17 92.8 111 45.9
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 1.1e-13 81.6 225 33.3
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 5.1e-11 72.8 188 33.5
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 1.9e-10 70.9 49 67.3
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 2.5e-10 70.5 38 78.9
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.3e-09 68.2 53 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 1.1e-08 65.1 133 34.6
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 1.8e-08 64.3 60 60.0
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 4.1e-08 63.2 84 42.9
Psat5g000080 Pisum sativum HOM05D006924 ORTHO05D008218 7.7e-07 58.9 106 41.5
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 8.5e-06 55.5 118 53.4


User provided reference genes

Program Settings