Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0002570 Simmondsia chinensis HOM05D006608 ORTHO05D008316 4.1e-75 284.6 144 100.0
THA.LOC104820562 Tarenaya hassleriana HOM05D006608 ORTHO05D008316 4.3e-56 221.5 132 83.3
COL.COLO4_05523 Corchorus olitorius HOM05D006608 ORTHO05D008316 9.5e-56 220.3 135 79.3
Gohir.A13G176500 Gossypium hirsutum HOM05D006608 ORTHO05D008316 2.8e-55 218.8 136 79.4
Gorai.013G208300 Gossypium raimondii HOM05D006608 ORTHO05D008316 2.8e-55 218.8 136 79.4
Hund21858 Selenicereus undatus HOM05D006608 ORTHO05D008316 3.6e-55 218.4 133 81.2
Potri.013G006500 Populus trichocarpa HOM05D006608 ORTHO05D008316 6.1e-55 217.6 135 78.5
Duzib177G0608 Durio zibethinus HOM05D006608 ORTHO05D008316 1.0e-54 216.9 135 77.8
Potri.005G010700 Populus trichocarpa HOM05D006608 ORTHO05D008316 1.0e-54 216.9 135 78.5
Dinv30914 Davidia involucrata HOM05D006608 ORTHO05D008316 1.4e-54 216.5 135 77.8
Eucgr.H01287 Eucalyptus grandis HOM05D006608 ORTHO05D008316 1.4e-54 216.5 135 77.0
Sabra13G0005500 Salix brachista HOM05D006608 ORTHO05D008316 1.4e-54 216.5 135 77.8
Thecc.05G325800 Theobroma cacao HOM05D006608 ORTHO05D008316 1.8e-54 216.1 135 77.8
AUR62006773 Chenopodium quinoa HOM05D006608 ORTHO05D008316 2.3e-54 215.7 135 77.8
Sabra05G0007800 Salix brachista HOM05D006608 ORTHO05D008316 5.2e-54 214.5 135 77.0
Nn4g25453 Nelumbo nucifera HOM05D006608 ORTHO05D008316 6.8e-54 214.2 134 76.1
PGR031G0497 Punica granatum HOM05D006608 ORTHO05D008316 8.9e-54 213.8 133 79.7
CSS0011542 Camellia sinensis var. sinensis HOM05D006608 ORTHO05D008316 1.2e-53 213.4 135 76.3
GSVIVG01031268001 Vitis vinifera HOM05D006608 ORTHO05D008316 1.5e-53 213.0 135 75.6
Cfa006713 Carpinus fangiana HOM05D006608 ORTHO05D008316 2.0e-53 212.6 132 78.0
Sabra05G0019000 Salix brachista HOM05D006608 ORTHO05D008316 2.0e-53 212.6 135 76.3
SGA_v2.0_scaffold4G01979 Striga asiatica HOM05D006608 ORTHO05D008316 2.0e-53 212.6 132 80.3
TWI12G0784 Tripterygium wilfordii HOM05D006608 ORTHO05D008316 2.0e-53 212.6 135 77.0
Manes.08G109600 Manihot esculenta HOM05D006608 ORTHO05D008316 4.4e-53 211.5 132 77.3
Haze_04048 Corylus avellana HOM05D006608 ORTHO05D008316 5.8e-53 211.1 135 75.6
MBI18_g27388_MAGBIO Magnolia biondii HOM05D006608 ORTHO05D008316 7.5e-53 210.7 132 75.8
TAR362G0553 Trochodendron aralioides HOM05D006608 ORTHO05D008316 9.8e-53 210.3 135 74.8
Actinidia35508 Actinidia chinensis HOM05D006608 ORTHO05D008316 1.7e-52 209.5 135 73.3
Ah.04g158480 Amaranthus hybridus HOM05D006608 ORTHO05D008316 1.7e-52 209.5 135 75.6
CANSAT54G1874 Cannabis sativa HOM05D006608 ORTHO05D008316 1.7e-52 209.5 135 75.6
MSTRG.16414 Avicennia marina HOM05D006608 ORTHO05D008316 2.2e-52 209.1 135 77.0
C01p27450 Brassica napus HOM05D006608 ORTHO05D008316 2.9e-52 208.8 132 77.3
Ciclev10002108m.g Citrus clementina HOM05D006608 ORTHO05D008316 2.9e-52 208.8 135 74.1
EL10Ac4g09502 Beta vulgaris HOM05D006608 ORTHO05D008316 3.7e-52 208.4 135 74.8
Glyma.03G230300 Glycine max HOM05D006608 ORTHO05D008316 3.7e-52 208.4 132 78.0
VMungo1383G0735 Vigna mungo HOM05D006608 ORTHO05D008316 4.9e-52 208.0 132 76.5
Cc02_g35130 Coffea canephora HOM05D006608 ORTHO05D008316 6.4e-52 207.6 132 77.3
PSO210G3601 Papaver somniferum HOM05D006608 ORTHO05D008316 8.3e-52 207.2 132 74.2
Prupe.6G309700 Prunus persica HOM05D006608 ORTHO05D008316 8.3e-52 207.2 136 74.3
QL03p016892 Quercus lobata HOM05D006608 ORTHO05D008316 1.1e-51 206.8 132 75.0
CiPaw.08G154200 Carya illinoinensis HOM05D006608 ORTHO05D008316 1.8e-51 206.1 132 75.8
RcHm_v2.0_Chr3g0457591 Rosa chinensis HOM05D006608 ORTHO05D008316 4.1e-51 204.9 135 72.6
FAN02G2060 Fragaria x ananassa HOM05D006608 ORTHO05D008316 5.4e-51 204.5 135 72.6
Lj2g0018741 Lotus japonicus HOM05D006608 ORTHO05D008316 5.4e-51 204.5 135 73.3
PSO761G0023 Papaver somniferum HOM05D006608 ORTHO05D008316 5.4e-51 204.5 132 73.5
Phvul.001G224100 Phaseolus vulgaris HOM05D006608 ORTHO05D008316 5.4e-51 204.5 132 75.8
arahy.Tifrunner.gnm1.ann1.7ZK9KC Arachis hypogaea HOM05D006608 ORTHO05D008316 7.0e-51 204.1 119 82.4
A08p11770 Brassica napus HOM05D006608 ORTHO05D008316 7.0e-51 204.1 132 75.8
BraA08t33169Z Brassica rapa HOM05D006608 ORTHO05D008316 7.0e-51 204.1 132 75.8
Lalb_Chr04g0260371 Lupinus albus HOM05D006608 ORTHO05D008316 7.0e-51 204.1 132 75.0
arahy.Tifrunner.gnm1.ann1.0RV1NN Arachis hypogaea HOM05D006608 ORTHO05D008316 9.2e-51 203.8 132 77.3
arahy.Tifrunner.gnm1.ann1.V41D0B Arachis hypogaea HOM05D006608 ORTHO05D008316 9.2e-51 203.8 132 76.5
Cpa.g.sc48.186 Carica papaya HOM05D006608 ORTHO05D008316 9.2e-51 203.8 134 76.1
Ca_09291_v3 Cicer arietinum L. HOM05D006608 ORTHO05D008316 9.2e-51 203.8 134 73.1
FAN09G0299 Fragaria x ananassa HOM05D002543 ORTHO05D002990 9.2e-51 203.8 135 72.6
MD12G1203800 Malus domestica HOM05D006608 ORTHO05D008316 1.2e-50 203.4 136 73.5
FvH4_6g07900 Fragaria vesca HOM05D006608 ORTHO05D008316 1.6e-50 203.0 135 71.9
FAN14G1365 Fragaria x ananassa HOM05D006608 ORTHO05D008316 1.6e-50 203.0 135 71.9
Solyc01g106090.3 Solanum lycopersicum HOM05D006608 ORTHO05D008316 1.6e-50 203.0 135 75.6
Sopen01g048480 Solanum pennellii HOM05D006608 ORTHO05D008316 1.6e-50 203.0 135 75.6
arahy.Tifrunner.gnm1.ann1.FYW6BY Arachis hypogaea HOM05D006608 ORTHO05D008316 2.7e-50 202.2 132 76.5
CAN.G504.78 Capsicum annuum HOM05D006608 ORTHO05D008316 2.7e-50 202.2 135 74.1
FAN05G5720 Fragaria x ananassa HOM05D006608 ORTHO05D008316 2.7e-50 202.2 135 71.9
BolC8t48283H Brassica oleracea HOM05D006608 ORTHO05D008316 3.5e-50 201.8 132 75.0
Thhalv10025982m.g Eutrema salsugineum HOM05D006608 ORTHO05D008316 3.5e-50 201.8 132 75.0
HanXRQChr09g0247441 Helianthus annuus HOM05D006608 ORTHO05D008316 3.5e-50 201.8 135 73.3
BcaC09g50241 Brassica carinata HOM05D006608 ORTHO05D008316 4.6e-50 201.4 131 74.8
BcaC09g50245 Brassica carinata HOM05D006608 ORTHO05D008316 4.6e-50 201.4 131 74.8
Lj9A306T68 Lonicera japonica HOM05D006608 ORTHO05D008316 4.6e-50 201.4 132 73.5
BcaNung00268 Brassica carinata HOM05D006608 ORTHO05D008316 6.0e-50 201.1 134 73.1
MELO3C026109.2 Cucumis melo HOM05D006608 ORTHO05D008316 6.0e-50 201.1 127 78.0
A01p22060 Brassica napus HOM05D006608 ORTHO05D008316 7.8e-50 200.7 132 74.2
ECA240G1520 Erigeron canadensis HOM05D006608 ORTHO05D008316 1.0e-49 200.3 135 72.6
SalBow5G2350 Salvia bowleyana HOM05D006608 ORTHO05D008316 1.0e-49 200.3 135 74.1
Sp7g13760 Schrenkiella parvula HOM05D006608 ORTHO05D008316 1.3e-49 199.9 133 75.2
BcaC07g37888 Brassica carinata HOM05D006608 ORTHO05D008316 1.7e-49 199.5 132 74.2
Lsat_1_v5_gn_7_65241 Lactuca sativa HOM05D006608 ORTHO05D008316 1.7e-49 199.5 132 73.5
Rhsim11G0098400 Rhododendron simsii HOM05D006608 ORTHO05D008316 1.7e-49 199.5 132 72.0
BolC1t02685H Brassica oleracea HOM05D006608 ORTHO05D008316 2.3e-49 199.1 131 74.0
Sed0000881 Sechium edule HOM05D006608 ORTHO05D008316 2.3e-49 199.1 127 75.6
CsaV3_1G015710 Cucumis sativus L. HOM05D006608 ORTHO05D008316 3.0e-49 198.7 127 78.0
Nitab4.5_0005908g0020 Nicotiana tabacum HOM05D006608 ORTHO05D008316 3.0e-49 198.7 135 73.3
Peaxi162Scf00299g00341 Petunia axillaris HOM05D006608 ORTHO05D008316 3.0e-49 198.7 135 71.9
PGSC0003DMG400010682 Solanum tuberosum HOM05D006608 ORTHO05D008316 3.0e-49 198.7 135 74.1
ATR0706G264 Amborella trichopoda HOM05D006608 ORTHO05D008316 3.9e-49 198.4 118 78.0
CARHR222300 Cardamine hirsuta HOM05D006608 ORTHO05D008316 3.9e-49 198.4 132 73.5
MD04G1191200 Malus domestica HOM05D006608 ORTHO05D008316 5.0e-49 198.0 136 72.1
ClCG01G010870 Citrullus lanatus HOM05D006608 ORTHO05D008316 1.1e-48 196.8 135 74.1
DCAR_002111 Daucus carota HOM05D006608 ORTHO05D008316 1.1e-48 196.8 135 71.1
Aqoxy2G02631 Aquilegia oxysepala HOM05D006608 ORTHO05D008316 1.9e-48 196.1 132 72.0
AL7G40010 Arabidopsis lyrata HOM05D006608 ORTHO05D008316 1.9e-48 196.1 132 74.2
Nitab4.5_0002750g0060 Nicotiana tabacum HOM05D006608 ORTHO05D008316 1.9e-48 196.1 135 71.9
vmacro01585 Vaccinium macrocarpon HOM05D006608 ORTHO05D008316 2.5e-48 195.7 132 71.2
Aa31LG2G11410 Aethionema arabicum HOM05D006608 ORTHO05D008316 3.3e-48 195.3 132 71.2
AT4G15510 Arabidopsis thaliana HOM05D006608 ORTHO05D008316 3.3e-48 195.3 132 71.2
Migut.B00927 Erythranthe guttata HOM05D006608 ORTHO05D008316 3.3e-48 195.3 136 73.5
unitig_0.g2226 Utricularia gibba HOM05D006608 ORTHO05D008316 3.3e-48 195.3 132 72.7
Gohir.D13G182950 Gossypium hirsutum HOM05D006608 ORTHO05D008316 4.3e-48 194.9 136 73.5
TPR.G1650 Trifolium pratense HOM05D006608 ORTHO05D008316 4.3e-48 194.9 134 69.4
Medtr7g111880 Medicago truncatula HOM05D006608 ORTHO05D008316 1.6e-47 193.0 133 69.2
Carub.0007s2637 Capsella rubella HOM05D006608 ORTHO05D008316 2.8e-47 192.2 132 71.2
CDE01G0267 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 3.6e-47 191.8 132 68.2
BcaB04g18298 Brassica carinata HOM05D006608 ORTHO05D008316 2.3e-46 189.1 108 82.4
Psat3g014240 Pisum sativum HOM05D006608 ORTHO05D008316 3.1e-46 188.7 108 78.7
CDE12G0684 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 8.9e-46 187.2 132 65.9
SEGI_38534 Sequoiadendron giganteum HOM05D006608 ORTHO05D008316 4.4e-45 184.9 127 68.5
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 5.8e-45 184.5 133 67.7
Os07g0275100 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 2.2e-44 182.6 121 71.9
Os12g0564400 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 6.4e-44 181.0 121 71.1
Mapoly0002s0119 Marchantia polymorpha HOM05D006608 ORTHO05D008316 2.5e-40 169.1 109 69.7
Pp3c25_7030 Physcomitrium patens HOM05D006608 ORTHO05D008316 1.2e-39 166.8 132 59.8
Oeu019844.1 Olea europaea HOM05D006608 ORTHO05D008316 7.5e-37 157.5 111 70.3
CBR_g54968 Chara braunii HOM05D006608 ORTHO05D008316 5.1e-33 144.8 100 65.0
SMO203G0012 Selaginella moellendorffii HOM05D006608 ORTHO05D008316 8.6e-33 144.1 111 61.3
Cre08.g362900 Chlamydomonas reinhardtii HOM05D006608 ORTHO05D008316 2.0e-29 132.9 120 51.7
MCO08G333 Micromonas commoda HOM05D006608 ORTHO05D008316 2.4e-27 125.9 138 46.4
Os07g0275901 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 6.4e-20 101.3 75 70.7
Glyma.19G227402 Glycine max HOM05D006608 ORTHO05D008316 7.8e-18 94.4 72 66.7
Os07g0275801 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 7.3e-16 87.8 54 74.1
AUR62000427 Chenopodium quinoa HOM05D006608 ORTHO05D008316 3.4e-13 79.0 41 87.8
PRCOL_00003409 Prasinoderma coloniale HOM05D006608 ORTHO05D008316 2.7e-10 69.3 106 31.1


User provided reference genes

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