Gene: AT4G15510

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15510
  • Transcript Identifier AT4G15510.3
  • Gene Type Coding gene
  • Location Chr4 : 8861351-8862529 : positive

Gene Family Information

  • ID HOM05D006608
  • #Genes/#Species 121/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15510.3
  • symbol PPD1
  • full_name PsbP-Domain Protein1
  • uniprot O23403

Descriptions

  • Description Photosystem II reaction center PsbP family protein
  • Computational description Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 9 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis
GO:0048564
IMP
Gene Ontologyphotosystem I assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma2
GO:0019898
IEA
Gene Ontologyextrinsic component of membrane
GO:0019898
IEA
InterProextrinsic component of membrane
GO:0009654
IEA
Gene Ontologyphotosystem II oxygen evolving complex
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid3
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane5
GO:0031977
IDA
GOA Databasethylakoid lumen
GO:0031977
HDA
Gene Ontologythylakoid lumen6
GO:0009543
IEA
GOA Databasechloroplast thylakoid lumen
GO:0009543
IDA, HDA
Gene Ontologychloroplast thylakoid lumen1 6
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
IPR002683 PsbP, C-terminal
Mapman id Description
1.1.4.3.2 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PPD1)