Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 5.3e-163 577.8 325 100.0
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 6.4e-84 315.1 341 57.8
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 2.6e-77 293.1 331 55.6
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 4.9e-76 288.9 335 53.4
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 6.0e-74 282.0 336 53.0
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 7.8e-74 281.6 336 52.1
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 7.8e-74 281.6 334 53.6
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.0e-73 281.2 335 52.2
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.7e-73 280.4 339 50.7
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 3.0e-73 279.6 339 52.2
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 3.0e-73 279.6 328 53.7
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 6.6e-73 278.5 339 50.4
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 8.6e-73 278.1 330 53.9
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 2.5e-72 276.6 326 54.3
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 3.3e-72 276.2 338 50.9
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.3e-72 276.2 337 49.9
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 4.3e-72 275.8 339 51.3
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 5.6e-72 275.4 333 52.6
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 9.6e-72 274.6 339 53.4
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 9.6e-72 274.6 337 50.4
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 1.6e-71 273.9 328 51.8
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 3.6e-71 272.7 337 50.1
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 4.7e-71 272.3 341 52.2
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 1.1e-70 271.2 326 50.6
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.0e-70 269.2 326 51.5
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 6.9e-70 268.5 328 51.5
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 3.4e-69 266.2 332 50.9
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.9e-69 264.6 331 53.2
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 1.3e-68 264.2 332 53.0
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.7e-68 263.8 331 55.9
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.7e-68 263.8 331 55.9
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 2.2e-68 263.5 328 50.6
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 2.2e-68 263.5 332 50.6
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 6.4e-68 261.9 338 51.5
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 8.4e-68 261.5 326 51.5
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 1.1e-67 261.2 344 48.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.1e-67 261.2 326 49.7
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.1e-67 261.2 332 49.1
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 1.9e-67 260.4 328 51.5
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 2.4e-67 260.0 341 48.4
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 9.3e-67 258.1 327 50.8
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 2.7e-66 256.5 339 54.0
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 3.5e-66 256.1 328 49.7
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 4.6e-66 255.8 333 48.3
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 1.0e-65 254.6 330 50.3
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 2.3e-65 253.4 322 47.8
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 3.0e-65 253.1 334 48.2
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 3.0e-65 253.1 332 48.5
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.1e-64 251.1 332 50.0
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.9e-64 250.4 328 47.9
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 3.3e-64 249.6 333 47.7
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 4.3e-64 249.2 330 50.0
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 5.6e-64 248.8 326 48.2
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 9.6e-64 248.1 328 47.6
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 9.6e-64 248.1 328 48.8
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 9.6e-64 248.1 326 49.1
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 1.6e-63 247.3 407 45.2
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 2.1e-63 246.9 327 48.6
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 3.6e-63 246.1 326 47.5
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 6.2e-63 245.4 324 49.4
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 6.2e-63 245.4 330 48.8
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 1.1e-62 244.6 373 47.5
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 1.4e-62 244.2 326 48.8
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 2.4e-62 243.4 326 47.9
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 4.0e-62 242.7 329 55.3
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.2e-61 241.1 322 47.8
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 1.5e-61 240.7 346 48.3
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 2.0e-61 240.4 327 54.1
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 1.7e-60 237.3 331 46.8
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 1.1e-59 234.6 326 46.0
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 1.9e-59 233.8 326 46.6
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 2.4e-59 233.4 329 46.5
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 5.4e-59 232.3 328 48.2
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 5.4e-59 232.3 326 49.4
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 9.3e-59 231.5 335 45.4
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.6e-58 230.7 326 47.2
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 3.5e-58 229.6 326 47.9
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 3.5e-58 229.6 324 45.7
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 4.6e-58 229.2 331 47.7
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 6.7e-57 225.3 325 45.2
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.1e-56 224.6 331 46.8
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.9e-56 223.8 325 45.8
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 2.5e-56 223.4 322 46.6
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 2.5e-56 223.4 325 45.5
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.5e-56 223.4 325 45.5
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.3e-55 221.1 331 44.4
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.1e-55 220.3 338 45.9
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.8e-55 219.2 337 44.5
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.8e-54 217.2 337 43.9
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 3.1e-54 216.5 327 47.4
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 4.0e-54 216.1 326 46.0
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 9.0e-54 214.9 325 47.1
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 9.0e-54 214.9 325 47.1
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.2e-53 214.5 326 45.7
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 9.9e-53 211.5 327 46.8
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.3e-52 211.1 334 44.6
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.1e-51 208.0 334 44.3
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 7.9e-50 201.8 332 44.0
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 8.7e-49 198.4 276 47.8
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.1e-48 198.0 328 43.9
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 1.9e-48 197.2 158 65.8
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.4e-46 191.0 333 44.4
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 4.5e-45 186.0 337 41.2
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 3.3e-32 143.3 125 56.0
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 4.3e-32 142.9 284 39.8
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 2.0e-29 134.0 323 35.0
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 3.6e-26 123.2 287 41.5
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 4.6e-26 122.9 360 30.6
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.8e-25 120.9 341 34.9
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 8.8e-25 118.6 328 31.4
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 5.7e-24 115.9 247 35.2
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 2.6e-21 107.1 373 29.2
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 4.5e-21 106.3 137 43.8
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 4.5e-21 106.3 139 50.4
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 6.7e-17 92.4 241 33.6
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 6.7e-17 92.4 306 30.7
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 2.0e-16 90.9 339 29.8
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 1.7e-15 87.8 216 37.0
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.8e-15 87.0 241 32.8
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 2.8e-15 87.0 139 38.1
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 2.6e-13 80.5 138 37.0
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.7e-07 61.2 31 77.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.7e-07 61.2 31 77.4


User provided reference genes

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