Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0001920 Simmondsia chinensis HOM05D003601 ORTHO05D004896 5.6e-103 377.5 175 100.0
CiPaw.01G074700 Carya illinoinensis HOM05D003601 ORTHO05D004896 5.7e-39 164.9 110 72.7
Dinv18735 Davidia involucrata HOM05D003601 ORTHO05D004896 9.8e-39 164.1 110 72.7
QL05p061428 Quercus lobata HOM05D003601 ORTHO05D004896 9.8e-39 164.1 108 66.7
CSS0019404 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 2.9e-38 162.5 109 65.1
CSS0034548 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 2.9e-38 162.5 109 65.1
Medtr7g109250 Medicago truncatula HOM05D003601 ORTHO05D004896 3.7e-38 162.2 107 68.2
EL10Ac9g21625 Beta vulgaris HOM05D003601 ORTHO05D004896 1.4e-37 160.2 111 66.7
ClCG08G004950 Citrullus lanatus HOM05D003601 ORTHO05D004896 1.4e-37 160.2 112 67.9
Glyma.05G210600 Glycine max HOM05D003601 ORTHO05D004896 1.4e-37 160.2 112 67.0
Sc08g0001910 Simmondsia chinensis HOM05D003601 ORTHO05D004896 1.8e-37 159.8 103 74.8
Cfa003813 Carpinus fangiana HOM05D003601 ORTHO05D004896 3.2e-37 159.1 110 68.2
Nn2g12387 Nelumbo nucifera HOM05D003601 ORTHO05D004896 4.1e-37 158.7 112 67.9
QL05p061139 Quercus lobata HOM05D003601 ORTHO05D004896 5.4e-37 158.3 110 65.5
Cc05_g04050 Coffea canephora HOM05D003601 ORTHO05D004896 1.2e-36 157.1 110 67.3
HPP92_024723 Vanilla planifolia HOM05D003601 ORTHO05D004896 1.2e-36 157.1 112 66.1
ATR1127G077 Amborella trichopoda HOM05D003601 ORTHO05D004896 1.6e-36 156.8 112 62.5
Glyma.03G025400 Glycine max HOM05D003601 ORTHO05D004896 1.6e-36 156.8 112 63.4
Rhsim07G0005200 Rhododendron simsii HOM05D003601 ORTHO05D004896 1.6e-36 156.8 112 62.5
Sabra14G0071300 Salix brachista HOM05D003601 ORTHO05D004896 1.6e-36 156.8 107 66.4
AUR62016842 Chenopodium quinoa HOM05D003601 ORTHO05D004896 2.7e-36 156.0 112 67.0
COL.COLO4_20208 Corchorus olitorius HOM05D003601 ORTHO05D004896 5.9e-36 154.8 107 66.4
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 5.9e-36 154.8 112 62.5
arahy.Tifrunner.gnm1.ann1.EN9PMD Arachis hypogaea HOM05D003601 ORTHO05D004896 7.8e-36 154.5 113 63.7
Potri.014G097300 Populus trichocarpa HOM05D003601 ORTHO05D004896 7.8e-36 154.5 107 65.4
VMungo0331G0886 Vigna mungo HOM05D003601 ORTHO05D004896 7.8e-36 154.5 107 64.5
TAR375G0212 Trochodendron aralioides HOM05D003601 ORTHO05D004896 1.3e-35 153.7 109 64.2
CsaV3_6G034170 Cucumis sativus L. HOM05D003601 ORTHO05D004896 2.3e-35 152.9 111 63.1
Glyma.08G286000 Glycine max HOM05D003601 ORTHO05D004896 2.3e-35 152.9 108 67.6
QL01p016478 Quercus lobata HOM05D003601 ORTHO05D004896 2.3e-35 152.9 108 64.8
Carub.0001s0088 Capsella rubella HOM05D003601 ORTHO05D004896 2.9e-35 152.5 114 63.2
LjContig00564g0001173 Lotus japonicus HOM05D003601 ORTHO05D004896 2.9e-35 152.5 116 62.9
Phvul.010G084000 Phaseolus vulgaris HOM05D003601 ORTHO05D004896 2.9e-35 152.5 112 65.2
Sed0004785 Sechium edule HOM05D003601 ORTHO05D004896 2.9e-35 152.5 111 63.1
Lalb_Chr04g0261591 Lupinus albus HOM05D003601 ORTHO05D004896 3.9e-35 152.1 106 66.0
BcaB03g13574 Brassica carinata HOM05D003601 ORTHO05D004896 6.6e-35 151.4 113 62.8
CANSAT11G0274 Cannabis sativa HOM05D003601 ORTHO05D004896 6.6e-35 151.4 116 63.8
MD04G1169800 Malus domestica HOM05D003601 ORTHO05D004896 6.6e-35 151.4 110 65.5
TAR374G1433 Trochodendron aralioides HOM05D003601 ORTHO05D004896 6.6e-35 151.4 110 64.5
TAR374G1718 Trochodendron aralioides HOM05D003601 ORTHO05D004896 6.6e-35 151.4 110 64.5
Ca_09198_v3 Cicer arietinum L. HOM05D003601 ORTHO05D004896 8.6e-35 151.0 108 63.9
Lj1g0023495 Lotus japonicus HOM05D003601 ORTHO05D004896 8.6e-35 151.0 113 64.6
Manes.07G071780 Manihot esculenta HOM05D003601 ORTHO05D004896 1.1e-34 150.6 112 64.3
Thecc.04G197100 Theobroma cacao HOM05D003601 ORTHO05D004896 1.1e-34 150.6 107 65.4
Aqoxy3G00289 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 1.5e-34 150.2 106 63.2
Haze_15640 Corylus avellana HOM05D003601 ORTHO05D004896 1.9e-34 149.8 110 63.6
SHI13229 Sapria himalayana HOM05D003601 ORTHO05D004896 2.5e-34 149.4 108 65.7
Cpa.g.sc273.4 Carica papaya HOM05D003601 ORTHO05D004896 4.3e-34 148.7 116 61.2
Manes.02G115900 Manihot esculenta HOM05D003601 ORTHO05D004896 4.3e-34 148.7 110 66.4
GSVIVG01027082001 Vitis vinifera HOM05D003601 ORTHO05D004896 4.3e-34 148.7 111 61.3
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 5.6e-34 148.3 118 59.3
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 9.5e-34 147.5 112 60.7
MD07G1148000 Malus domestica HOM05D003601 ORTHO05D004896 1.2e-33 147.1 109 64.2
THA.LOC104812142 Tarenaya hassleriana HOM05D003601 ORTHO05D004896 1.2e-33 147.1 116 59.5
CDE08G1615 Ceratophyllum demersum HOM05D003601 ORTHO05D004896 1.6e-33 146.7 106 62.3
ECA236G1416 Erigeron canadensis HOM05D003601 ORTHO05D004896 1.6e-33 146.7 113 58.4
Atru.chr5.650 Acer truncatum HOM05D003601 ORTHO05D004896 2.1e-33 146.4 114 61.4
Eucgr.D01238 Eucalyptus grandis HOM05D003601 ORTHO05D004896 2.1e-33 146.4 119 61.3
FvH4_6g10411 Fragaria vesca HOM05D003601 ORTHO05D004896 2.1e-33 146.4 109 61.5
FAN14G0738 Fragaria x ananassa HOM05D003601 ORTHO05D004896 2.1e-33 146.4 109 61.5
Os02g0301000 Oryza sativa ssp. japonica HOM05D003601 ORTHO05D004896 2.1e-33 146.4 113 61.1
PSO541G5643 Papaver somniferum HOM05D003601 ORTHO05D004896 3.6e-33 145.6 111 62.2
PSO675G3308 Papaver somniferum HOM05D003601 ORTHO05D004896 3.6e-33 145.6 111 62.2
PGSC0003DMG400013655 Solanum tuberosum HOM05D003601 ORTHO05D004896 3.6e-33 145.6 111 59.5
BraA10t42337Z Brassica rapa HOM05D003601 ORTHO05D004896 4.7e-33 145.2 113 60.2
Ciclev10021165m.g Citrus clementina HOM05D003601 ORTHO05D004896 4.7e-33 145.2 114 62.3
MD01G1079100 Malus domestica HOM05D003601 ORTHO05D004896 4.7e-33 145.2 109 62.4
unitig_0.g331 Utricularia gibba HOM05D003601 ORTHO05D004896 4.7e-33 145.2 113 59.3
HanXRQChr04g0120251 Helianthus annuus HOM05D003601 ORTHO05D004896 6.2e-33 144.8 109 59.6
vmacro23173 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 6.2e-33 144.8 136 56.6
Gohir.A03G095300 Gossypium hirsutum HOM05D003601 ORTHO05D004896 8.0e-33 144.4 108 63.9
Sp1g00940 Schrenkiella parvula HOM05D003601 ORTHO05D004896 8.0e-33 144.4 113 58.4
Gohir.D02G113600 Gossypium hirsutum HOM05D003601 ORTHO05D004896 1.0e-32 144.1 108 63.9
Prupe.6G288300 Prunus persica HOM05D003601 ORTHO05D004896 1.4e-32 143.7 109 62.4
Aa31LG11G12300 Aethionema arabicum HOM05D003601 ORTHO05D004896 1.8e-32 143.3 113 59.3
A10p00590 Brassica napus HOM05D003601 ORTHO05D004896 1.8e-32 143.3 113 59.3
Thhalv10009432m.g Eutrema salsugineum HOM05D003601 ORTHO05D004896 1.8e-32 143.3 113 58.4
AL1G11100 Arabidopsis lyrata HOM05D003601 ORTHO05D004896 2.3e-32 142.9 113 59.3
AT1G01350 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 2.3e-32 142.9 113 59.3
MELO3C010640.2 Cucumis melo HOM05D003601 ORTHO05D004896 2.3e-32 142.9 140 53.6
Duzib151G0301 Durio zibethinus HOM05D003601 ORTHO05D004896 2.3e-32 142.9 115 60.9
BcaB03g13575 Brassica carinata HOM05D003601 ORTHO05D004896 3.1e-32 142.5 113 59.3
C05p00620 Brassica napus HOM05D003601 ORTHO05D004896 3.1e-32 142.5 113 59.3
BolC5t28850H Brassica oleracea HOM05D003601 ORTHO05D004896 3.1e-32 142.5 113 59.3
HanXRQChr06g0170651 Helianthus annuus HOM05D003601 ORTHO05D004896 4.0e-32 142.1 109 59.6
RcHm_v2.0_Chr3g0492261 Rosa chinensis HOM05D003601 ORTHO05D004896 4.0e-32 142.1 110 60.9
AT5G06420 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 5.2e-32 141.7 113 58.4
Peaxi162Scf00130g01110 Petunia axillaris HOM05D003601 ORTHO05D004896 8.9e-32 141.0 110 59.1
Peaxi162Scf01343g00152 Petunia axillaris HOM05D003601 ORTHO05D004896 8.9e-32 141.0 111 59.5
Pp3c8_16180 Physcomitrium patens HOM05D003601 ORTHO05D004896 8.9e-32 141.0 111 55.0
Hund16704 Selenicereus undatus HOM05D003601 ORTHO05D004896 8.9e-32 141.0 107 60.7
Migut.B01852 Erythranthe guttata HOM05D003601 ORTHO05D004896 1.2e-31 140.6 113 56.6
Nitab4.5_0010133g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 2.6e-31 139.4 106 59.4
SMO351G0471 Selaginella moellendorffii HOM05D003601 ORTHO05D004896 2.6e-31 139.4 107 58.9
TWI59G1066 Tripterygium wilfordii HOM05D003601 ORTHO05D004896 2.6e-31 139.4 115 59.1
Mapoly0066s0113 Marchantia polymorpha HOM05D003601 ORTHO05D004896 3.4e-31 139.0 108 56.5
PGR042G1585 Punica granatum HOM05D003601 ORTHO05D004896 1.3e-30 137.1 107 59.8
Lsat_1_v5_gn_7_1360 Lactuca sativa HOM05D003601 ORTHO05D004896 3.7e-30 135.6 113 55.8
CBR_g49220 Chara braunii HOM05D003601 ORTHO05D004896 4.9e-30 135.2 115 54.8
Gorai.005G129300 Gossypium raimondii HOM05D003601 ORTHO05D004896 4.9e-30 135.2 120 57.5
SEGI_12555 Sequoiadendron giganteum HOM05D003601 ORTHO05D004896 6.4e-30 134.8 107 57.0
Hma1.2p1_0180F.1_g079650 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 1.1e-29 134.0 112 58.9
CARHR001090 Cardamine hirsuta HOM05D003601 ORTHO05D004896 1.4e-29 133.7 113 55.8
Peaxi162Scf00119g01222 Petunia axillaris HOM05D003601 ORTHO05D004896 1.4e-29 133.7 98 66.3
Zm00001eb204190 Zea mays HOM05D003601 ORTHO05D004896 3.2e-29 132.5 114 57.0
Hma1.2p1_1566F.1_g291000 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 5.4e-29 131.7 112 58.0
MSTRG.17333 Avicennia marina HOM05D003601 ORTHO05D004896 7.0e-29 131.3 111 55.0
Peaxi162Scf00036g00412 Petunia axillaris HOM05D003601 ORTHO05D004896 9.2e-29 131.0 107 57.0
TPR.G20293 Trifolium pratense HOM05D003601 ORTHO05D004896 9.2e-29 131.0 108 58.3
SGA_v2.0_scaffold5G03009 Striga asiatica HOM05D003601 ORTHO05D004896 1.0e-27 127.5 114 55.3
Sopen02g026770 Solanum pennellii HOM05D003601 ORTHO05D004896 1.3e-27 127.1 111 54.1
MCO16G487 Micromonas commoda HOM05D003601 ORTHO05D004896 3.3e-26 122.5 117 54.7
Sc23g0002160 Simmondsia chinensis HOM05D003601 ORTHO05D004896 7.3e-26 121.3 78 73.1
Dinv32573 Davidia involucrata HOM05D003601 ORTHO05D004896 9.5e-26 120.9 113 54.9
AagrBONN_evm.TU.Sc2ySwM_344.3813 Anthoceros agrestis HOM05D003601 ORTHO05D004896 8.1e-25 117.9 96 57.3
arahy.Tifrunner.gnm1.ann1.JS26LE Arachis hypogaea HOM05D003601 ORTHO05D004896 4.0e-24 115.5 113 52.2
Ah.01g018710 Amaranthus hybridus HOM05D003601 ORTHO05D004896 1.5e-23 113.6 79 70.9
CBR_g26342 Chara braunii HOM05D003601 ORTHO05D004896 2.6e-23 112.8 115 47.8
ECA247G1228 Erigeron canadensis HOM05D003601 ORTHO05D004896 4.4e-23 112.1 59 78.0
DCAR_004784 Daucus carota HOM05D003601 ORTHO05D004896 7.5e-23 111.3 79 69.6
PRCOL_00000030 Prasinoderma coloniale HOM05D003601 ORTHO05D004896 2.9e-22 109.4 128 47.7
Lj8C0T4 Lonicera japonica HOM05D003601 ORTHO05D004896 2.4e-21 106.3 80 66.2
Lj8C4T0 Lonicera japonica HOM05D003601 ORTHO05D004896 2.4e-21 106.3 80 66.2
QL04p075812 Quercus lobata HOM05D003601 ORTHO05D004896 9.2e-21 104.4 79 62.0
Cre06.g254650 Chlamydomonas reinhardtii HOM05D003601 ORTHO05D004896 1.2e-20 104.0 128 45.3
DCAR_004777 Daucus carota HOM05D003601 ORTHO05D004896 1.3e-19 100.5 75 66.7
QL05p063445 Quercus lobata HOM05D003601 ORTHO05D004896 1.3e-19 100.5 80 61.2
Sed0000777 Sechium edule HOM05D003601 ORTHO05D004896 1.7e-19 100.1 78 59.0
Duzib212G0966 Durio zibethinus HOM05D003601 ORTHO05D004896 3.0e-19 99.4 90 55.6
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 1.1e-18 97.4 89 55.1
Cfa021608 Carpinus fangiana HOM05D003601 ORTHO05D004896 1.9e-18 96.7 122 37.7
Carub.0008s2038 Capsella rubella HOM05D003601 ORTHO05D004896 3.3e-18 95.9 115 47.0
QL05p061570 Quercus lobata HOM05D003601 ORTHO05D004896 4.3e-18 95.5 77 59.7
AL6G52380 Arabidopsis lyrata HOM05D003601 ORTHO05D015895 1.2e-17 94.0 109 43.1
C02p38360 Brassica napus HOM05D003601 ORTHO05D015895 1.2e-17 94.0 134 39.6
AT4G01023 Arabidopsis thaliana HOM05D003601 ORTHO05D015895 1.6e-17 93.6 105 45.7
Carub.0006s3606 Capsella rubella HOM05D003601 ORTHO05D015895 1.6e-17 93.6 107 44.9
Thhalv10029283m.g Eutrema salsugineum HOM05D003601 ORTHO05D015895 8.1e-17 91.3 73 56.2
Haze_27631 Corylus avellana HOM05D003601 ORTHO05D004896 2.3e-16 89.7 111 40.5
Prupe.7G095500 Prunus persica HOM05D003601 ORTHO05D004896 1.2e-15 87.4 109 43.1
CARHR249320 Cardamine hirsuta HOM05D003601 ORTHO05D015895 1.5e-15 87.0 97 42.3
Nitab4.5_0000614g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 2.0e-15 86.7 101 42.6
CAN.G809.19 Capsicum annuum HOM05D003601 ORTHO05D004896 3.4e-15 85.9 78 52.6
Nitab4.5_0001815g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 3.4e-15 85.9 78 51.3
Aqoxy5G01484 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 5.8e-15 85.1 69 55.1
A02p24300 Brassica napus HOM05D003601 ORTHO05D015895 7.6e-15 84.7 130 36.9
BraA02t07420Z Brassica rapa HOM05D003601 ORTHO05D015895 7.6e-15 84.7 130 36.9
A01p41390 Brassica napus HOM05D003601 ORTHO05D023606 1.1e-13 80.9 83 47.0
BNapus_Darmor_BZH_scaffold_78p00320 Brassica napus HOM05D003601 ORTHO05D023606 1.1e-13 80.9 83 47.0
BcaC03g16072 Brassica carinata HOM05D003601 ORTHO05D015895 1.9e-13 80.1 135 35.6
BolC2t09850H Brassica oleracea HOM05D003601 ORTHO05D015895 1.9e-13 80.1 135 35.6
Sp6g01130 Schrenkiella parvula HOM05D003601 ORTHO05D015895 2.4e-13 79.7 77 49.4
FvH4_5g30073 Fragaria vesca HOM05D003601 ORTHO05D004896 1.6e-12 77.0 71 45.1
Actinidia20220 Actinidia chinensis HOM05D003601 ORTHO05D004896 5.1e-11 72.0 76 50.0
Nitab4.5_0005819g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 6.6e-11 71.6 62 56.5
BraA09t42245Z Brassica rapa HOM05D000288 ORTHO05D000173 2.5e-10 69.7 66 54.5
RcHm_v2.0_Chr3g0461311 Rosa chinensis HOM05D003601 ORTHO05D004896 8.1e-09 64.7 107 38.3


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